Array 1 41199-41003 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AHVO01000004.1 Staphylococcus aureus subsp. aureus CIGC345D strain StaphylococcusaureusCIGC345D PSABG_30_CIGC345D.contig.4_1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence          	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	=========================	===============================	==================
     41198	    25	  92.0	    31	.........A...........C...	AGCTGACAGAAAGTCAGCTTACAATAATGTG	
     41142	    25	 100.0	    30	.........................	GAATTTCAAAAAGAAATTCTACAGACAATG 	
     41087	    25	  96.0	    31	.....................C...	AGGTGACGAAAAGTCAGCATACAATAATGTG	AAGG [41076]
     41027	    25	 100.0	     0	.........................	|                              	
==========	======	======	======	=========================	===============================	==================
         4	    25	  97.0	    31	CAAGTTGGCGGGGCCCCAACATAGA	                               	       

# Left flank :   CACTTTGAAATCGATCCTGTAGAACCAAAATATTTTGGGGAAGTAGCAAAATATTATCGCCATAAGGATAATGGTGTTCAATTTGGTTTGATTACAAGTGTTTCACAATCATTTTGTTCTACATGTACACGCGCAAGGCTGTCATCAGATGGGAAGTTTTACGGATGTTTATTTGCAACTGTCGATGGATTTAACGTTAAAGCGTTTATTCGTTCTGGCGTGACCGACGAAGAATTAAAAGAACAATTTAAAGCTTTATGGCAAATAAGAGATGATCGATATTCAGATGAGAGAACTGCTCAAACAGTTGCCAATCGTCAACGTAAAAAGATAAACATGAATTATATTGGTGGTTAATGTGTAGGGACCACTACATATTAAATCATTAGAGATGTTTTAATATTTCTGTCTTACTCCCTAAAATACAATATTATTTATTAAAGTAAAAACGGTCATATCTATGCCAGATTTAATAGAAATGATCGTTTTTAAAGTTTTTA
# Right flank :  GAATTTCAAAAGAAATTCTACAGACAATGCAAGTTGGGGATCAACGAAATAAATTTTATGAGAATATCATTTCTATCCCACTCTTAAGAATCACTACATAATAAATCTTTAGTGGTTCTTTAACATTGATGTCACACTCCATGCCATTGAGTTGTAATATATCTTTTTTAGGTATAAATGTTGTCGAATAAACAACAAGTTGTCCAAAAGATATAAATCTAAACAAGATATAGCCAGCAATTTAATATTTGTAATAGATAAAATGCTAAGTTTGATATATAATAAATTTAAGTAATTGTATAATAATATGAATTACAAACATCTAAGAAGAAACATAGGAGGCATCATATTATGAGTAATAAAGTTCAACGTTTTATAGAAGCAGAAAGGGAGTTAAGTCAGTTAAAGCACTGGTTAAAAACAACACATAAGATTTCAATTGAAGAATTTGTAGTCCTTTTTAAAGTGTATGAAGCTGAAAAGATTAGCGGTAAAGAATT

# Questionable array : NO	 Score: 2.51
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CAAGTTGGCGGGGCCCCAACATAGA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [3,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-2.70,-2.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [5-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [70.0-75.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,0.78   Confidence: MEDIUM] 

# Array family : NA
//