Array 1 23358-24303 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACP01000021.1 Edwardsiella anguillarum ET081126R 21, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 23358 28 100.0 33 ............................ CTTTTCCTGCCAGGATTTATCCAACGCGTCCAC 23419 28 100.0 34 ............................ TGGACTATGAAGCGGTAGAACGCTGGGTCTGTGA 23481 28 100.0 34 ............................ CCCCGTAAGTCCATTAATGATCACAGAGCACCTA 23543 28 100.0 33 ............................ CGTTTCAAAGTCGAGGGTTTCCACCGTATCGGG 23604 28 100.0 33 ............................ CCCTGCATCGGTACATGACAAAGACTGAAGCGG 23665 28 100.0 33 ............................ TGCCTTCAATGGCCGCCGCATTCTCTTGACCAG 23726 28 100.0 33 ............................ TTCGGCCTTAGCCCTGGCAGCGGGCAACGTAGA 23787 28 100.0 33 ............................ TGTCTTATCGGTGGCACCGCCAGATGCTTCCCG 23848 28 100.0 33 ............................ CGATTGTCCCTGATGCCGCCAACTCTTTCCCAT 23909 28 100.0 33 ............................ TGGCTATGAAAACGTGTTCCCGGTGTATGGCTC 23970 28 100.0 33 ............................ TGCCGATGTATTCGACGTTGTATTTTTCGGTAA 24031 28 100.0 33 ............................ TGACTGCGTAGATAGAGCACTGTGCAGCATCGA 24092 28 100.0 34 ............................ CTACCAGCCAGCCCGGACAGGTCCAGCTTGAGGA 24154 28 100.0 33 ............................ CTTTATTCTGGGCCGTAGCGCTGCTGGAACGCT 24215 28 100.0 33 ............................ TAGCCCGGAAGGTTGGGAGAGTACGCTATGAAA 24276 28 92.9 0 ..C........................A | ========== ====== ====== ====== ============================ ================================== ================== 16 28 99.6 33 GTTTTCCCCACGCCTGTGGGGGTGTTTC # Left flank : TTGTCGTGGCGCTTGATGAAGTACTCGGCTACAGCCTGAGAGGTGGTAACAGCTTTGCCATCGTGAATGGTTACACTGGGGGTGTGTACAGAAAGCCGATGAGTCATTTTTCTGTGTCCTACGTATATGTTCAAATTTACCCTGTGTTCAGCAGGGCGGTCGGGTACTTGAACACCGTACGTAGTCGGCCAGCAGTTTTTCCCTTACGGGTGTTGTATGGTCTGCTCGCTACCCGGCCATATCTGAAAGTATGGACACAAAAAAAACCGCATTGCTGTCGGGTGCGGAGGCCGCTACGTAAGGTGTGTTCAGCACCTGAGCGGACTATACTCCCGGCATCGCGGGTAAAACTAATTTCGATTTATGATACTTTACTTACAAATCATAGGAATTCAATGAATCATTCTAGCCTGACCATACAGAGCCCCATCTGGCTATTCGACCAGTAAACCAACCACAATCTGTAGCTGGTTTAGTATGTTCTTTAACAATATAATGGG # Right flank : AATAGGAAACTGACCGAGTCACATATCAAGGCCAATAAAACCAGGCTGCTGGCTATGTGGCAATCAGCGGCGCGATTTTGGCTATCGTGCGGGAAAATAACGCACAGCTCGGTTAAGGGCTTACTGTGCGCCGTCAAGCGCCGCCCTTCAGAGCGGGGGGATACTCACTCTCATCACTAGGATCACCACTGATGAAGGTACTGGCCTCCTGAAACGACCGGAACACAGGTCATTTAGTGATATCCATCTAACTTACTGAAATACAACTAATCGATATCAAATAAAGATCGAGGGAATCCATTATTATTAGGGAGCCCCATAGCGGTTAAATTACACCCAGGCAAACGAGGTTTATCATTATCAATAAGATCGGCAATATTTCTAATCCATTTTGAGCCAGGGCCGATTTTTTTCACCAAAAACCATAGCACAGCTATCATCCCATACATTCTTTCGTAGGCATCATCATTCATACTCAATCGCTCAAAGTATGGGTAATT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCACGCCTGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 19693-18568 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACP01000038.1 Edwardsiella anguillarum ET081126R 38, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 19692 28 100.0 33 ............................ TCGGGTCAGACAGTGTAGCCCCGATCTGTACAC 19631 28 100.0 33 ............................ CTCGGCATGATTACCGATAGCGATAAAGCTGCT 19570 28 100.0 33 ............................ TCGTTGAGCCAGTCTTTTTCCATGTATGTGCCG 19509 28 100.0 33 ............................ CGACGCTTTAAGCTCTACACCGGTCGCCTGAAC 19448 28 100.0 33 ............................ TCTGGCCCACGAAAAAACACCCTGGCGCCGGGG 19387 28 100.0 33 ............................ CGTTTGGTGATGTTAGTTGCGCTGATCGTCTCC 19326 28 100.0 33 ............................ TCGCCGACAGCGCACTCAGCGCCGACGCGGCCT 19265 28 100.0 33 ............................ TCGTTGAGCCAGTCTTTTTCCATGTATGTGCCG 19204 28 100.0 33 ............................ CGACGCTTTAAGCTCTACACCGGTCGCCTGAAA 19143 28 100.0 33 ............................ TGCAACTACTCAACATCGTAGCGCCGAAAGGAA 19082 28 100.0 33 ............................ TCAGCAGCACACCAATGATCCACTCAATGTGAC 19021 28 100.0 33 ............................ TCTGGCCCACGAAAAAACACCCTGGCGCCGGGG 18960 28 100.0 33 ............................ CGTTTGGTGATGTTAGTTGCGCTGATCGTCTCC 18899 28 100.0 33 ............................ TCGCCGACAGCGCACTCAGCGCCGACGCGGCCT 18838 28 100.0 33 ............................ TCGTTGAGCCAGTCTTTTTCCATGTATGTGCCG 18777 28 100.0 33 ............................ CGACGCTTTAAGCTCTACACCGGTCGCCTGAGC 18716 28 100.0 33 ............................ TGATTGATGGCTGTGTAGCGCGGTTACGTAAAT 18655 28 100.0 33 ............................ TCTCACACCTATCTGTCCGGCAACATCGAGTGC 18594 27 92.9 0 ................A....-...... | ========== ====== ====== ====== ============================ ================================= ================== 19 28 99.6 33 GTCTTCCCCACGTCCGTGGGGGTGTTTC # Left flank : GAACCTCTGTATCGATCTTGCCTTCTCCCTGACGCGTGAGATGGCGGGTCGTTATGAGAAGGCTCTGGTTTCATCTCGTTTTCGAGAGCGGGTGATAGAACTGAATTTGCTCGCGAGTGTAGCCAGAGATATACCACAGCTACTTGGAGGGGCAAATATTGATGCTGATAGTGCTAGCTAACGATTTACCTCCAGCAGTTCGAGGACGAATGAAACTTTGGTTTATTGAACCGCGGCCAAATACCTTCGTTTCCGGTATCAAGGATTCGGTTGCTGACACAGTGATCGAATACCTTTATCAACACTGCTCACCGGCAGCGGGTGTGGTGATATTTAAAAGCATTGCTAGAACACCGGGATATCAGATCCATACCATAGGATCACCGACTAAGACGCTCTGTGAGATCAATGGCCTGCAGTTGGTGATAGAAAAGCGACTCGAGCAGTAAGTTAACCACAATATGTAGTTGGTTTAGTATGCTCTTTAACAATATAATGGG # Right flank : CAAAAGTCAGCCAGTGAACCGTCTCGGTTTTGTGGGAGAGCGTTAAGTCCGGGAGTTCAGGCTGCCATAGCCTCGTTCCCGATGGGAGCGTAATACACTTTTTCTGCCTCAGCGGGTGGGATGTGACTCAGCCGCTCAAGCAACCGACGATTGTTGTACCAGTCCACCCACGCCAGTGTGGCCAGCGCCACTTCCTGCCAGTTTCTCCAGCTCTGTCGGTGTTTTGTACAGACCGTTGATACTTTCGGCCATGGCATTATCATAAGAGTCACCCGTACTGCCCGTTGAAGCTAGAAGCTCCGCCTCCTGTAGCCGCTGTGTGTACGCTAGCGATACGTACTATGAGCCTTTGTCGCTGTGATGAAGGGGGGCTGATGGCCGACGGGCCCACAGCGCCAGCTCCAGCGCGTCCAGTACGAACGCTGTCTCTTGGTCAGTGAAGCCTGGATCGCCAGTGGGGGTTCCGCCGGTGTCAGAAGCATCGCCACGATGGTCACTAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGTCCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //