Array 1 705672-705905 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADKPV010000001.1 Savagea serpentis strain SN6 SN6_WGS_assembly_contig_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 705672 33 100.0 33 ................................. AGCACTCTTCATTAAGTCATCTGACCATCGATA 705738 33 97.0 33 ...............T................. TGCTGGCGCAGCGAAATATTGATCTAATTTCAC 705804 33 97.0 36 .............C................... TCCCATTCCTTTTTGTGCATCGTCTGCATTTGTTAA 705873 33 78.8 0 .........A...........AAT...G...GA | ========== ====== ====== ====== ================================= ==================================== ================== 4 33 93.2 34 GTCTCCCTCTGCATAGAGGGAGTGGATTGAAAT # Left flank : GCGTCGATTTCGGAACGTATATCTTTTACGGAAGCATTAATCCGCAACTTGCTGAAAAAACTGGCTTTACAAGTGAAGATGCTGAAAAGTTAAAACAAGCGCTCATTACTTTGTTTGCAAATGATGCATCTTCCGCGCGTCCGGATGGATCGATGGAAGTGAACAAAGTGTTCTGGTGGGAGCACAACAATAAAATTGGTCAATATTCATCCGCTAAAGTGCACCGCTCTGTTAAAATAGAGCGCACAGTCGATGGACTAGCGACTTCATTTGAAGATTATGACATTCAAGTCGAACCTTTAGAAGGGCTTGACGTTCAAGTGTACGATGGACTCTAATTCTGTATCGCTCATGATCTCGGGCATTCGACATTACGTATTTTGCCCGAGACAATGGGCGCTTATTCATATCGAGCAAGCTTGGGAGGAAAACGTGCTAACGGTAGAGGGAGTGGATTGAAATAGCTGTTACAATCATCTACGGTCGCACTAGGATGGATG # Right flank : ACATTTGAAGTGTTCCTTGAATGATATGGATGTACTTAGGTAAATATGCTATAACATGGGAGAGTAGATAATAAAATTTGAATTTGTACGGTGTAGAATTTGATGATGTGTATCTGTTAATCTAAAAGTGAGCCACATCGCAATTGAAAACTGAGCCACCTTGTAAGAAAATCCTACACACAGGGATTATGGAGATTACTTATTTTTTGAAACGTTCGAAAGAAAGGGACTTTGATGTAAAGTGAATATTTGAATCAAGCACCTAACCAAATAAAAAATATATTCGATTCCTATTATATCGGAAATGCAGTAGATTATCCGTGAAAACTTGGGAATTTTAACACCGATGTTCACAGCAATCTTAATCTTTGTAGCATGTGTATATTGCAAAATAATCCATCTCATATAGAAATGTAAACGATGGAGGGATAGTATGAAATCAAATGAATATGTATTAGAGCGTATCAAGTTGTTATTACAGGAGCAAGGGAAATCCTACC # Questionable array : NO Score: 6.71 # Score Detail : 1:0, 2:3, 3:3, 4:0.66, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCCTCTGCATAGAGGGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: F [matched GTCTCCCTCTGCGAGGAGGGAGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 709394-709562 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADKPV010000001.1 Savagea serpentis strain SN6 SN6_WGS_assembly_contig_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 709394 33 100.0 35 ................................. ATTGGTCTGCTCATTTTTTTGATTCAATTCTTCTA 709462 33 100.0 35 ................................. ACAATTGCAGCACTCCCAAAAAACCGAAACAAAAT 709530 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= =================================== ================== 3 33 100.0 36 GTCTCCCTCTGCTTAGAGGGAGTGGATTGAAAT # Left flank : CCTAAGACTTAAGTTCGGTATTCTACCGGGCTTAGGTCTTTTAATTTCGCTTTCATACGTTTGTGATAGTAGTACTTAATTTTACATTGCAACGAGTGAACAATTAACAAAAGAACGTGTCAAAATATTACAAAACCTTATCTACCTCGCGTTTGAAACATACGGAATCGATGCCAAAACATCGATTGGATATGGATTAGGGAAAGTGATGTTAAAGAAAAGAAGAGGCAATCAGATGGATAAGACGAAAATATTTCAAAACATATTAACCATTAACAACCCACTGCTGTTTTTATATTATGCATATGCTAGGATGTTCAATAAAGTGGAAGAGTAAAAAGTGTCTGCGAACCTGAAGCGCCCATGAAAACCCCAGGACCTTCGCAAAGAAAACAGCTCTTTTCATGAGGTTTTAGTGAAGTTCTAAACATCGCTTGAAAGAAAAAGGGAAATGAGGCACAATATGTAGTAATCGGGGGATTCAACCACAACCCCTCGCG # Right flank : TTCGAACATCGTTAAGCTTTTTTCTAATAGACCAGTCTCCCTTGTATCTCAATAATCTTTTGAAAGTTGTATTTTCGGAGGACTTCATATTTTATGTGAGTAGCTTACTTGCCCTTAATCGCCTTTCTCTCTGGTTCCTCTAGCTATTTTTAATAGCTCATTTTCTGTTTCTAAATATTTAATAATACGTGCTTCAGTTTTCTGCAAGTTCTTTTCAGCTTATAAGTACTTCTTTTTTCTTCGCTCTTTACCAATTATCACTATGTAAAACTGATTTTCGTTGATGCTTGTTGAAATAGATTTTACTCGTATAGACAAGCTCCTTTTAGTTAAGAATAGTACAGAGGATTTTTCATAGAAAAACCCTGAAAAGGGTACTTTTTTAAAGTGTCCACATTTCAGGAGTCAGTTCATTTTCAGAAAAAAGAGGAGCGTTTTATTCGGATTCGTCTTGGTCGAGTGAGTACGGAGGCGGTTGTTTAAAAGAAAATGTAAAGGTA # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCCTCTGCTTAGAGGGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.94%AT] # Reference repeat match prediction: F [matched GTCTCCCTCTGCGAGGAGGGAGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 712954-713190 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADKPV010000001.1 Savagea serpentis strain SN6 SN6_WGS_assembly_contig_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 712954 33 100.0 36 ................................. GATGTTAATATGCTTACTGATTCATTAAATGTATTC 713023 33 100.0 34 ................................. TGAAAACACACTAAAGTTAATCAAGGAGTGCAAT 713090 33 100.0 35 ................................. AAGTCAAAGGCAGAGACCAAAACATACGCGGAAGT 713158 33 84.8 0 ..T.......G.A...............A..G. | ========== ====== ====== ====== ================================= ==================================== ================== 4 33 96.2 35 GTCTCCCTCTACTTAGAGGGAGTGGATTGAAAT # Left flank : TAAAAGCAAGAGAACAAGCTAAAAAACAGCAGAGGCCTTTGCTGTTTTTTTAAGGTGAAGTTTAATAAAAAATGGAAAATAGACTGAATAAACATACCAAAAATCTTTTCACATAGAGGGGGTTTTTCTGTGGATTGTGCGAAGTCAGGAGAAGAAGCATCGCCTCTCCATTTCGTTTTAATTTGATACATAACACTCAATATATAGCATAAGACAAGACATCTTTTCCAAACATTTCAAGTAATGTTCCATGATCATCTTCTACAAATAAAATATAATCTCTTTAAGAGAGATAAGGCAGTACAATTCATAAAAAAATTTGATTAAATAAACATTTAAGTCACGCGCGAACCTAAAGTGCCCATGAAAACCCCGGGACCTTCGCAAAGAAAATGGCGCCTTTTATGAAGTTTTAGTGAAGTCCTAAACATTACTTGCAAGAAAAAGGGAAATGAGGCACAATATGTAGTAATAGGGGGAGTTAAATACAATCCCTCGCA # Right flank : TCTATATTGGAAATCCTTCTTAGTTTAAAATAAGATGATTGTTATAAAAGTGTCATTAAAGAAGAGTTCGTTTATTAAAACGGGCTCTTTTTTAGTTCTTTGGAATGTATTTATGAGCTTTATTAGTTTTTTAATGATATTATATACCTAAAAGATGGGAGTGATGGAAAATGTGTGAGAAAAAAGAGGCGAAGTCTGAAGTTCATCAAACGATAGATGGCCATCCGATTTTTAACATGATTGCTCAGAACTATTTACGATTGGAACAGTCTATCGTTCAAGAGCTTTATTTCTGATACATTTCGGGAAGCCATATGGAAAGAATTGTTTGAGCAAATCGTTCCGAAGAAATTCGTTGTGGAACAGTCCGTTTTTATTTTAGATTCTCATGGCAGCGTTTCCAAAGAAGTAGATCTTGTTATTTTGGACGAAATGTATACGCCTTATATTTTTAGACAAGGGCATTTGAAGTTTATACCGATTGAAGCGGTCGCAGTAGC # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCCTCTACTTAGAGGGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.55%AT] # Reference repeat match prediction: F [matched GTCTCACTCTATTTAGAGTGAGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.30,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 721196-722109 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADKPV010000001.1 Savagea serpentis strain SN6 SN6_WGS_assembly_contig_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 721196 33 100.0 36 ................................. ATGTAGATCGACGTGCGAAAGACGGTCATAAAAACG 721265 33 100.0 35 ................................. AAAAAATCTGGAATCTTATAAACGTCCACTTGCTA 721333 33 100.0 33 ................................. AGAAACGAATCTCACGTCGAATTGAAAATCATA 721399 33 100.0 34 ................................. AACAAACTCGGCGCGGTCTTCACTTCCTAAAATA 721466 33 100.0 38 ................................. CACGATGATGTCTTCCGTTCCTAGTCCATTGTATTGGA 721537 33 100.0 35 ................................. ATGTTATCCCTCACACCATTCGCATGACTCGATGT 721605 33 100.0 34 ................................. AAATTATATTTCGAAGAAAAGAAGGTGAGTGATG 721672 33 100.0 35 ................................. GAAATTAGGTTAGAGGTAGATCAGATGACATTTAG 721740 33 100.0 35 ................................. ACTCGTCTCCTCCATGTGCATTTCATCCGTCTGAA 721808 33 100.0 34 ................................. GGAACAATGCGACAGTTTGTTTTGAAAAACGATT 721875 33 100.0 34 ................................. GCGCTTTTAGATAAAGCATTCGATGCAGCGACAG 721942 33 100.0 35 ................................. AAAAATACCAAATCTTTATCTTTTGGAATCTCAGG 722010 33 93.9 34 ..........G..G................... AACTCTCTTGTTGTGCTGATTGGATGCGCTAAAT 722077 33 93.9 0 .......................A.....T... | ========== ====== ====== ====== ================================= ====================================== ================== 14 33 99.1 35 GTCTCCCTCTACATAGAGGGAGTGGATTGAAAT # Left flank : ACGGTGCAGTTAGTGGAAGCGTTCGTGAATATTTTGACATGGAAATTCACGCATCTGAAAAGCCAAAAGAAAAACTACACGTGCGAATGAATACAGATCGACGGACATTAGATGATTATTATCGAGCGTTGAATCACGGAGGCTCGCGTCGTGAAAGAGACCATGCAAGTGGAGTCGAAGAAAGAATGGTGGAAGACTTATCGGTGAATTATGGCGGGGAAGAAGTGTCCATTTTATCGCTCAATTTGAAATTGAATCAGTTATTGATGCTCATTAACAACCCGCCACTGTTTCCACATTACGCATACGCTCAAATGTTCAATGGTCTGGAAGGGTAAAAATAGCTGCGAACCTGAAGTGCCCATGAAAACCCCAGGACCTTCGCAAAGAAAACGGAACCTTTTATGAAGTTTTCGTGAAGTTATAAACATTGCTTGAAAGAAAAAGGGAAATGAGGCACAATATGTAGTAATCGAGGGATGTAAACACAACCCCTCGCA # Right flank : TTAAAAAAGTCAAATATAGTAAAATAAAACAAGACGAAAAGTACTAAAAGTATTTTCTGTCTTGTTTTATTTTACTTTACTTAGTATTCGCTATTACTTACTAAACTTTCTTTCAATTTACGGATGACTTCAACATCCAACTCTCCATCCTTAGAAAATTCATTTAAAAGTATTTTAAGTATGACTTTTCGATTTTTGGAATGAGATTCTGTAGAATCTGTAGAATCTGTAGAATCTGCAATAAGATTGTTCAATTTCCTTTGTGAAATTTCTTTGTAGAAGTTATCATCTAGTAAAAAATCGTAACTCATTACATTTGTTGCATCCTCATACCCCATTTCTTCAGAAACTAGAATCCAAATCCCGTATTTTTTATGGATCATTTCAACACTCTTAGTTAAATCGTTATCTTTTTTCATTCTTTTCAAAATCATTAAAACGTCAGATAAATATTCATAAAAAAATCTCAAAACTCCTATGTTTTTGGCATCTCCGCGTCC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCCTCTACATAGAGGGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.55%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.00,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA // Array 5 761229-761598 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADKPV010000001.1 Savagea serpentis strain SN6 SN6_WGS_assembly_contig_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 761229 33 100.0 35 ................................. TTTCTTCTTCAAAAAATGTAAAAACTTTTTCTTTT 761297 33 100.0 33 ................................. GACTACATTGACGCACACGGACTTTAAAAGGAG 761363 33 100.0 33 ................................. AGGACCAAGCAATTTTAGAAGATGAAACGATTA 761429 33 100.0 36 ................................. ATCATTAAGCTAATAATTTTGGTGAAAGGCGAAATA 761498 33 100.0 35 ................................. ATTGCATCTACATAGGCACTGTCTTTTAATAATTC 761566 33 87.9 0 ..........G....TG......A......... | ========== ====== ====== ====== ================================= ==================================== ================== 6 33 98.0 35 GTCTCCCTCTACATAGAGGGAGTGGATTGAAAT # Left flank : GTGTCCATCGTTATTACACGTTATTGCAAGAGGAAAAGTGGAAAGAAGCGCTTGAGCTCGTGCACGTTGACTCGAAAGACGCATCCATCGATAAAAAAGTAGAAGCATTGCAAACATCACCCGCTTCATTCACGCGCTATGCGATCCAACAAGTTGAGCATCTAGACGGGGCACATTACTATTTCATCGTACATGTGACGAAAGAAGAGGATGGCATTCAAAACATTTACGAAGACCGGGTATTTGTAGATGAGAAAACGAAAAAACTATCGATCACCTCGACAGACCCAAACATCGCGCTTCGGAGTGGCGAAATGTAAAGAGAAATCGTATCATTTTGCACGCGCGAACGTGAAGTGCCCACGAAAACCATAGGACCTTCGCAAAGAAAATCACACCTTTTATGAAGTTTTAGTGAAGTTCCAAACGTCACTTGCAAGAAAAAGGGAAATGAGGCACAATATGTAGTAATAGAGAGGCAAACAAAACAACCTCTCGCA # Right flank : TAAATAAAAAACCGCGAAACAAATGAATCGTTTTCTTCCGTATGAGGAGCGGTGGAAGTGGAGGTGTATTGTTTTTGAAGTTCCAAGCAAAAAAAGACTTCATGTATCGAATGATCGTATGGGGATCGGTCTTGTTGTTTTTAGGATTATCGATCGGGCTGTTTCTCCCGATTTATCATGAGGCTGGCCTTGTCGCAAGTTCGATTTTTTCTTCTATATGTGGGATTTTTGCCATCGTCATTTTATCGTTTTGGTACCGAACCTTTTACGTTATAACCGATGAACATTTAATGATATATGTCGGTCCAATGAAACGACGGATTGAGCTGGAGACGATTCAAAAAATCGAAAAGACGAATACGCCATTAGCTTCAGCTGCTCTTTCCAAAGAACGTTATTATTTGTATTATGGTTTAGGGGATGTCACCATTATCGCTCCAGAAAACATGAATACATTTGTAAAAGTGATCAATGAACAAAGAGATGAACCAGTGGAATTA # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCCTCTACATAGAGGGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.55%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.00,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 6 950402-950099 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADKPV010000001.1 Savagea serpentis strain SN6 SN6_WGS_assembly_contig_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ================================== ================== 950401 34 100.0 34 .................................. ATCGTTTTATCAGGCGCTTTGAGTGACAAGTACA 950333 34 100.0 34 .................................. CAAATCGTAAAATATGTTGCACTCCCAAATACAA 950265 34 97.1 33 .................................G TTAGATGCTCCACTGTACTCTTTAAACGACCGT 950198 34 100.0 32 .................................. TCATAGATAATAGAGATACCTATATTATGTTT 950132 34 88.2 0 .............A..A......A....A..... | ========== ====== ====== ====== ================================== ================================== ================== 5 34 97.1 34 GTCTCCCTCTGCTTAGGGGGAGTGGATTGAAATA # Left flank : AAGAAACGAATATCGAACGCTACGTCGAGCACATTATGACTCACGAATTATCGCGCCGTGAAGAAGTACAGTGGCTGAAACAACAATGGGAACAAAACATCTTCCTGCAACTTTACTTCGGCCACCGTCTAGAACTGTTTGTTCGTGCAGTTAATGATGAAATCGAGAAGAAACTGCTTAAATGAAAGTATGAAAAGACGATCGAACGGGACTGTTTTTATATTTTTCTTTAACCATTTCACATCCCCCCGACCAAATCCAATCGATTTTCGACACGGTGTTTAAAAAGAAAAACGATGAAATGAAAAAGTAAAGAGAAGGACTGTTCGAAAAGACAAGCCAATTTGCGAACCCGAAGTGCCCATGAAAACCCCGGGACCTTCGCAAAGAAAACAGTGTGCTTTATGAACTGTTAGTGAAGTGTAAGCAAGCACTTGCAAGAAAAAGGGAAATGAGGCACAATATGTAGTAATTGAGGGATTCAAACACAACCCCTCGCA # Right flank : GAACAAAGCACTGAGCCAACCGTAAAATAACCTCTACTCGAGATAGTCGGGTAGAGGTTATTTGCGTTGTTTTTTTATGGGGTTGGGCGTAAAACCCCTATGCCTTTAGGCTAGGGGATGTAAGCCCTGACTACCTTGTGTTTGAATGTACTGTTGAATAGTCTCTTTGCTAGCATTTCCAATGCTACATGAGAAATATCCATCACTTCAGAAGGTTCGTTCCTTCCAAAAATGTCGAGAAAGGTACTCACTATGTTTTTGCCAGATTCTATAAGTCGTGAGTTGTTTTAACAACCTAACTATTTCAAGAATACTCCACTTAGGAGAGTAGCATGAAATGACACATAATGAAATGCTTACTATGATTTTCAGAAACGTATTTCATTGTTTTTCTAGACCTTTCCTGATTAGTTCGTAGACAGTGCCTGAAAAAGTTCGGATCTGGTGTTGTTCCCTATATTCCTCGATTCGTACGACTAAATCGACAGGGAACTTAATTA # Questionable array : NO Score: 2.91 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCCTCTGCTTAGGGGGAGTGGATTGAAATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.20,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : NA //