Array 1 23752-23070 **** Predicted by CRISPRDetect 2.4 *** >NZ_VWMN01000047.1 Bacteroides salyersiae strain BIOML-A13 scaffold47_size23800, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ======================================== ================== 23751 35 100.0 39 ................................... ATTGCTGCAACAACAAATATCAATGCGCAAGAAAATACC 23677 35 100.0 37 ................................... ATTACGCATAAGCCAAACCTTCCCAAAGGAATAGTTT 23605 35 100.0 40 ................................... AAAAAAATTCTCAACCGGCTGACCAAAAAGCAACGGGAAG 23530 35 100.0 40 ................................... TCGCAACTTCGCTGTTGAGGTAATCGGAGGATACGTTGGA 23455 35 100.0 36 ................................... AATCACCACAGAGGATGATATTTTCTACACCCCAAT 23384 35 100.0 37 ................................... AATGTAGACAAACTGGTTCCTCCGACCCCGGATATGC 23312 35 100.0 35 ................................... ATGATTGGGGTCACCCTGCCAAACATAAACTATTA 23242 35 100.0 34 ................................... CTCTGTACGGTAAAGACGGACAAAAGCATAATAA 23173 35 100.0 34 ................................... TCATTTGTGCCGGTATCGGTGTGATTTGGGCTCT 23104 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ======================================== ================== 10 35 100.0 37 GTCTTAATCCTTATTCTACTGGAAGTAACTCAAAT # Left flank : AAGTAACTCAAATCGGTAAGGAAGCGACCCGTAAGATATTGGAAATCT # Right flank : AATCTGATTATCAATAATTTATTTTTTACTCTTTGTTTTGTATATTTCTCATAAAGTATTGTTATTTAATACAATACGCTATATTCCAATAACTTTTTCGCAAATGTATGTATTATTTTTAAGAAAATCAATAATTTGTTTGGCTAATATATGCTTATTTGCTTAAAAATAAGATATTTACATTGAATATCTATTTTCGAAAATGATTTTGAATTTCTTTAAAAAGATTCATTTTCGAAAAACGGTATAGAGGTATTATACAATATATTATTGATTATAAATGCAATACGTCAAAGATCGCTTGTATAGTAATGAATCATTTTCGCAAATGATTTACTTTGTTGCTAACATGTATTTTGTTGCGAATGTGATTTAAGTAATACAATTTATCTAAAAAATATAATATCAAATAAATCAGATAATTATCTTTTTATCGTTTTTCGCAAGAGTTTGGCCTTTTTTCATGTTTTGTTCACTTCATCTCACCACTTGGCCACATA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTATTCTACTGGAAGTAACTCAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [83.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 1 32751-31307 **** Predicted by CRISPRDetect 2.4 *** >NZ_VWMN01000043.1 Bacteroides salyersiae strain BIOML-A13 scaffold43_size32810, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================= ================== 32750 35 100.0 32 ................................... ATTGAAATACGTCAATATAACGGCCGTTGTTT 32683 35 100.0 36 ................................... AAATCCAGACTTTGTGTGCCATTGTCTTCTTGGTTT 32612 35 100.0 36 ................................... AGGAGGAAATATGCATCTCCCTTTGCCTTACTGGTG 32541 35 100.0 33 ................................... GAACTCAGATTTGTAAACGCCCATACGAGCTTT 32473 35 100.0 35 ................................... ATTATCTCATCAGAAAGTCCCTGTAACTCCCATTC 32403 35 100.0 38 ................................... TAAAAGCATTTCCAAACCGTTTTCCGTCTCAATGATTT 32330 35 100.0 39 ................................... TTTAAGGAGACTGAAAGTTTCAAGCTTCAGCCGCAAAGA 32256 35 100.0 34 ................................... TTCTGGGCTTTCAGAATATTGGTGTAACAAGTTG 32187 35 100.0 38 ................................... TTTTGGAACGCTTATAGGGTTCCATTTTTACGTGTTTC 32114 35 100.0 41 ................................... CTTTTTACATTTGCGACTGTTAATTTTGCTTTCATAATCTT 32038 35 100.0 34 ................................... AGAACCGGAGCAAGAAGTCAGAACACTTAAGGCT 31969 35 100.0 37 ................................... TTCCTTCGGAGCAAGGGAACAATTCTTTAACCAATAT 31897 35 100.0 39 ................................... GGCAAATATAGCAAGTTTGGCATTGTCTTTCATGATACC 31823 35 100.0 37 ................................... ATGCTATACCCTGATTCCGATATCCGTTTAAACAACA 31751 35 100.0 35 ................................... GTCGCAGGAAGTACACATTGCACCAAAAACTACTG 31681 35 100.0 37 ................................... GGCGGCGCAGCTGCTATTCCAACCATCTTGTGTACAT 31609 35 100.0 37 ................................... ATCTTTGGGAGTAGGGAGGATTAAGAACATTTTGTCT 31537 35 100.0 37 ................................... ACATTTTTGGATCATTCGGTTCAAGATGCACCGGTTT 31465 35 94.3 35 ...................A............A.. AACTCGATACCAAGAGATGAACTCAAAGCGTCAAA 31395 35 71.4 20 .A....A.....C...T..A..C..AA.C...A.. TGTGTATGTATACTTGTGTG Deletion [31341] 31340 34 80.0 0 ......C.AT..-...TC.A............... | ========== ====== ====== ====== =================================== ========================================= ================== 21 35 97.4 36 ATTTGAGTTACTTCCAGTAGAATAAGGATTAAGAC # Left flank : ACTTCCAGTAGAATAAGGATTAAGACAAACAGTATCATTCATAACTTTGGCGTTTATAT # Right flank : AAGCAACTCTCTAAAATCATTTATATCTCATTATCCCGAATTCAGAAACAATGATACATCATACACCTTTAATTCACTCTAATAATATTACCCCATTTTAACCTCAAAATTTTTCTTTTCCAATACCACATATCCCGCATTTTCATTATATTTACCTCCAAATACGCAACACCAAATGGCAAGAGCAAAAAAGACATTCTGTGTCGTAGCATACGATATTAAAGAAGACCGGAAAAGAGCACGCGTCTCTAAAATTCTGGAAAAATATGGAATAAGAGTCAATTTCAGTGTATTCGAATGTATGTTTACCGATATCCAACTATTACAAGTGCAAGAGAAAATAAAAAAAATATTGGATAAACGCTCCGATACAGTCATATACTATCCGATTTGCGTCAATTGTTATACAAAAATCATATATCAACCGGCACATCGCCAAACGTCCCGCACTATAGAAATTGTATAAAATAAAAAGAAATCATCTGATGAAACCCAAACGA # Questionable array : NO Score: 3.09 # Score Detail : 1:0, 2:0, 3:0, 4:0.87, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTGAGTTACTTCCAGTAGAATAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [19-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //