Array 1 564-48 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAPF010000017.1 Arcanobacterium phocae strain 4544 NODE_17_length_17318_cov_77.471086, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 563 29 96.6 32 ....G........................ CGACGGTGCGCGTCACGTCATGTCCGCGAGCA 502 29 96.6 32 C............................ GCGAAAGTGCAAGACGCACAGCTAATTCCACC 441 29 100.0 32 ............................. AACCATTTCAACGATTTCGTCCTACACAGCAA 380 29 100.0 32 ............................. TCTTCAACGGTTTGGAGGGCATACCATGATGT 319 29 100.0 32 ............................. CATCTACTAGCTCGATTTTTAGCGCACCTCCT 258 29 100.0 32 ............................. ACAAGTACAGCAAATCTTGCAGCAATGCGAGA 197 29 89.7 32 AAG.......................... ACCCTCTTGACCAGGCGGAAGGATTAGACCTT 136 29 100.0 31 ............................. CTGGAGTAGCTTCAAAAAGCTCCCCCGTGTA 76 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 9 29 98.1 32 GGAAATACCCCCGCGTGTGCGGGGAAGAG # Left flank : CTGTTGGGTTTTCTCCTAGGTCTGTACCGGCTCCTTGGAATTTGGCAAAGATGATCAGGACAAGGATGATCGTGAAACCGTGAAGCATGGCCGTTGCATACTTCTTGAGGTATCCGATCGAAATTTATTTTGTGTCGGTATGACCCAAGAATGCTAACGGTAGAGTTGCCCCAGCAGAAAGTATGTATATCTCAGCAAATCGCAAGAGTACAACGATTTTTACGACGATGCCGCCAAGCATTGAAATCAGCCAGGGCAAGAATAGAATGATCATTGCGCCGATCATATCTAGAGTATCCATATCAAGATCACCGATATTGACAGGGTTAGCCTGTATGACTGTTGCATACTTTTTCAGCCCGTTAATAAGTGTTTCGCCAGCTTCGTTAATAGCTTTAAGAATTAGATCTACATTTTGAATAGCGACAATAAGAAGCGCTACCTTGATCATGATCGTTCCGATCACTTGAGCGCCCATCTTTGAATCGCCTTCAAATTTT # Right flank : GGGCGACCAGCTTCTTGCCATTCTCGAAGCTGTGGAAATACCCCCGCG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGAAATACCCCCGCGTGTGCGGGGAAGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [3-2] Score: 0/0.41 # AT richness analysis in flanks prediction: R [31.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA // Array 1 34667-35245 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAPF010000015.1 Arcanobacterium phocae strain 4544 NODE_15_length_35246_cov_75.118286, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 34667 29 100.0 33 ............................. ATGATTTTAATATCGATATACCAATTCGTACTT 34729 29 100.0 32 ............................. TTCCGCAACGCCGTTGAGGAAGCACACATCAC 34790 29 100.0 32 ............................. CAGATACCTACACCGCACGTCGAGCGGATAGA 34851 29 100.0 32 ............................. CTGAATACGAAAATAGCCGGCGTGTTAAACCG 34912 29 100.0 32 ............................. GGCGTAATCAATTTCTTTGTAAATTCCTCAGC 34973 29 100.0 32 ............................. TGCTTTGGTGCGCGCTGCTGAGCTGATGGCGC 35034 29 100.0 32 ............................. ACAGCTTCGAGAATGGCAAGAAGCTGGTCGCC 35095 29 100.0 32 ............................. TTAGAAGAACGCACACTAACCGCGCGTGCCGT 35156 29 100.0 32 ............................. ACAGCTTCGAGAATGGCAAGAAGCTGGTCGCC 35217 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 10 29 100.0 32 CTCTTCCCCGCACACGCGGGGGTATTTCC # Left flank : TAGACGCGATTTACGGAGGCAAATTCATAGCAAGCATATATTGGAAGACATGCTTGGCACGCTCATGGAGATCTTAGAACCACACCTGCCGAATCGTGATGATGATCGATTGATCAATGATAATGGTGAAGTTTCTGGGCACGTACAATACGGAAAAGATGATGAGTGATGTTTGCAGTCTTAACAATATCTGCAGTTCCCGAGCATCTTCATGGCTATGTAACCCGATTTCTCACTGAGGTTGAAAGTGGGGTTTACGTCGGAAATATTTCTCGGAACGTGCGTGAACGCCTATGGGAACGTGTGAGTAGTACGCTTGACGAAGGAACTTCTACTATGATTTATAGCGACCCGCGACAAGAACAAGGATTCTCGATGCTCACTGCAGGAAAAAATTCACGAAAAGTATTGGACTTAGACGGTCTAACCGTTGTGTCCATGCGTCCTGGACGTGGAGAATCCAAAATTCGAGATCGTTGAAAATAAAGGCTTTCGTTAGT # Right flank : T # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCCCCGCACACGCGGGGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [56.7-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA //