Array 1 1226696-1227184 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LR590483.1 Streptococcus pyogenes strain NCTC8318 chromosome 1		Array_Orientation: Unconfirmed

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                        	Insertion/Deletion
==========	======	======	======	============================	=======================================	==================
   1226696	    28	 100.0	    37	............................	GATGTTAAAGATTTAAAAGATATGATGAGAGGAATTT  	
   1226761	    28	 100.0	    39	............................	GTGAGGTAAGAGAACTTAAAGATATTATGAGAGGTATTT	
   1226828	    28	 100.0	    38	............................	TTAAGCTTGATTATATTATAATCCGTTTTAAAACATTT 	
   1226894	    28	 100.0	    38	............................	GCAGATATTGTTACAAGTCAAGTCTATTGATGATATTT 	
   1226960	    28	 100.0	    37	............................	TTTATTGACTTTTTAAACTTTTTAGAAGAGTGTATTT  	
   1227025	    28	 100.0	    37	............................	TTTAAAAGTTATTTCAGATTTAAAAATCAGATAATTT  	
   1227090	    28	 100.0	    39	............................	GAGGATGCAAAATCAAAATTAGATACTAAATTTAAATTT	
   1227157	    28	 100.0	     0	............................	|                                      	
==========	======	======	======	============================	=======================================	==================
         8	    28	 100.0	    38	CAATCCACTCACCCATGAAGGGTGAGAC	                                       	       

# Left flank :   AGCTCTTAATGGTAATGAGGCCCATCTGATGAATCCCCAAGATAATGACCAAGGCTCCCAGGAAGGACCGAAACCATACCGCATAAAGGATATTTCCCAAAAAACCAGCCCCATAACCTAAAATCACAAAGATAGTGGATAACCCAAAAATGAAGGCTAAGGTCTTGACAATGCCATACCAATAGAGTTTTTTACCAAATATAGTAATCGTCTTTGAATCATCTGCATCCAGTAAAATACCTAAATAAACAGGAAGGACCGGAAAGATACACGGAGAGAAAAAGGATAACAAGCCTGCCCCAAAAACCGATACCATTAATACAAGTGATAGTGTCATAAATAACTCCTCTCTTAAGTTACCCTTAGTTTACCGAAAGCTAGTGGCGCAAACCATAGACTAGAACATGCAAAAACTTGAATTTGATACGCTATCAGATAAATGGTTGACTAAAGGCATGTAAAAACCCGACCTCATTAAAAGAGAGGTCGGATTCATCTTT
# Right flank :  CTGCGCCAAATGACACAGTTTATAGAGAAACGGATGGCACACATAGAGGTGTTTTAAGCCTTTTTATCTCCATTTCGCTTCTTTTTTAAGTTATTTTTGCGCGAGCAAGCAAGGTTTTTCTGTGAAAGCTAGCTTCGCACAAGAGATTTTTACAATAATAAGACACCTTTATCTGGGTCATAGCTGTCTGAGCGACCAAGTGTTTCCACACGCCTCTGCCAATTTTTCCCCAATAAATAAAAGCGAATACTATCAGTTTTCTCATCAATGATTTGTGTTAAGCGGTGCTTTATATCCACAAATTCTGCGGGTGTCACAGAACATTCAAAAACAGAATTTTGAACACGTTGCCCATAGTCCACACAGAGTTTGGCAACATGACGCAATCTTTTTCTACCAGCAGGTGTTTCCGTATTTACATCATAAGTGACTAAAACCATCATATAACATCTCCTAAACCATAAAAGGTGGATAGCTTTCTAAATCTCCTCGTATGGCCT

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CAATCCACTCACCCATGAAGGGTGAGAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [9,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-4.70,-5.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         NA [0.37,0.37   Confidence: NA] 

# Array family : NA
//