Array 1 142047-144063 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQVE01000004.1 Veillonella sp. 3891 contig_0004, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 142047 36 100.0 30 .................................... CGTGCGATTGCACGTGGTATCACTGATTAC 142113 36 100.0 30 .................................... ATTATGCCCCACACGTGCCATTGCTGCTTT 142179 36 100.0 30 .................................... CCCATTTTTTGCCCATTTCTTATATATTAA 142245 36 100.0 30 .................................... TTTCAAAACTTTATTTACAAAATGGTGGTC 142311 36 100.0 30 .................................... TACCCACCTGAGGTAGAACCTAAGAAACGT 142377 36 100.0 30 .................................... TGAAGAAATGGAACAATTGCGTGAGGTTGC 142443 36 100.0 30 .................................... AAATGCTACCGTGGGTAATTCTGGAAGTTG 142509 36 100.0 30 .................................... TAGATCATACTTTCAACATAAGCCGGGGGT 142575 36 100.0 30 .................................... CACGGTTTTCATACTCCACCACATTAGATG 142641 36 100.0 30 .................................... TAAAGAACAGTACAAAATAAGAAAAGCAGC 142707 36 100.0 30 .................................... GGTTCGACTCTTTATCTTTGTATCGTTCAT 142773 36 100.0 30 .................................... TTGTGACATATAATGCGCACGAACTTGGCC 142839 36 100.0 30 .................................... CTAAAGAAGAATCTAAAGGTAAGAAGAAAA 142905 36 100.0 30 .................................... GAACCGTGAGGAACAAATTGAATAATTTAC 142971 36 100.0 30 .................................... AGACGTGTGAGACATATCTATTTTTACCGT 143037 36 100.0 30 .................................... ATATATGCAGCTAGTGAAGTCTTTCCTCCT 143103 36 100.0 30 .................................... GAATCTAAATGATCTCTATACATCTTTACT 143169 36 100.0 30 .................................... TAAACTCCTCTATGCAAGCAATATTTTCAG 143235 36 100.0 30 .................................... GATGTTAGAGGAAAACACGAGACGAACCGC 143301 36 97.2 30 ...................T................ ATGTTGACCTAGTAGAAGGTAAGAAAAAAC 143367 36 100.0 31 .................................... TTGATTTGGATACATTAGTTATGCCAAATGA 143434 36 100.0 30 .................................... ATATGATTGTGCATACACTTGTTATGGAAA 143500 36 100.0 30 .................................... AGAAGGTAGTTTTACATACCCCTAATGATG 143566 36 97.2 30 ....................T............... CAGGTTATACTCTCAAACCTCCTACCCCAG 143632 36 97.2 30 ....................T............... AGAACGTCCTAACTTGCCGTGAGGATGTTG 143698 36 94.4 30 ....................TA.............. TCTGCCACTATCACCCAATCTGCGTGACAG 143764 36 91.7 30 ....................T...T....T...... ATACTGATCCATCCGCCCTACGGTATGTTG 143830 36 94.4 30 ....................T..........T.... TTCGGAGAGGCTTTTGGGGGGTTAATTATC 143896 36 94.4 30 ....................T.......G....... AGGTCAAAATTCGCTATTTTTTTAGGTAAT 143962 36 91.7 30 .................C..T..G............ AACATAATGCAGTGGATCCGAACACTTTGG 144028 36 72.2 0 ......A......A......TAA.T..AT....T.T | ========== ====== ====== ====== ==================================== =============================== ================== 31 36 97.8 30 GTTTGAGAGTAGTGTGATTCCGTAAATGACTCAAAC # Left flank : CAAAGTTAACGGCCAATTTGGTGAAAGAAAGTAATTTAATGATGGAAGAGTTACATGAAACGGTGTCCAGATTACATCAATTTTACTATCAACTGGAATTTGGATCATCGATTGATATCGAGCATAAGGAAGAAATCGTTGCTGCGGATATCATCAAGTTAGGAGCTTTTAAAATACCTGAAAATGATGCGGATCCAGTGGACCGTTTAGTAGACTATATCAATATAGTTCATGAACTATTAAATCCAGATCTATTTGTGATTGCAAATATAGAGATGTATTTAGACGTGGAAGAATTACATGCATTTTTTACGACTATGTTAGCGAAACAGCTATGCGTTTTATGTATATCTTCTGGGGTACATGGACTAGATGATATTGATAAATCTTTTATTAATGGGTATACTTTAGATAGCGACTTTTGTTTGATATAACAGCGTTTACAGAATCACACTTGGTGGTGACTGGACAAGCTTTGGAATCCCAAACTCGTATTTGGG # Right flank : TGAGATAATTACCAAGTATATTAAGATATTTGAACTTAATTGTTTTATAATTTTATCATTTAAACGAAGGAGGCCCTCCATGGCTAAATACGAATGGTGTACTGATGAATACCTAGAAAAGAAAAAAGAATGTTTTGATGCTTGTTTAAGTAAAGAATTTTTACAAGACTTGCAGGAATTGGTGCGTGAACATTATGATTTCGATGATGACTATCGCATTGGTAACTGGGACTTTATGGATGAAGATACTGTGGGTGTATACCGATTTGTCGAGACTTTAGCTGAAAAACATGGTGTTCAGGAACTGATTACCTTTTTAGACTCATTGGATTGGTGTGAGTATGATCTTGCAATGGATACCATGTTTGTTACCTATGGTAGAATGTTTCATTTGTTTACGCCAAAACGGCGCTATAGAAATCTATTTAAAGCAAAAGCTTTACATTATAAAGCTTGGATGCGAGAATTGAGGAAAAAATAAAATGATTTACTTTACCAGC # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAGTAGTGTGATTCCGTAAATGACTCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //