Array 1 225386-224094 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP007772.1 Campylobacter subantarcticus LMG 24374 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 225385 36 100.0 31 .................................... GATGATAGACAGCCTATTGTAGAAAGACTTG 225318 36 100.0 30 .................................... TTGATAGGTAATTTGATACGCAACACGTCT 225252 36 100.0 30 .................................... ACTTCAGAAATCTGTAACATCTGACTACCA 225186 36 100.0 30 .................................... TATCCCATGCTATAAAGCATTAATTGTGCA 225120 36 100.0 30 .................................... ACCAGAAGCTTTAAGATAAGTATTAATCAT 225054 36 100.0 30 .................................... TTCGCTCAAACCATTATCACAGCTTCTTTT 224988 36 100.0 30 .................................... GAATTTAACAATAATGAAATAGGAACGCTT 224922 36 100.0 30 .................................... CTAGGTATTAATGAGCAAGATGTAATGGCA 224856 36 100.0 30 .................................... TAAAGAGAGTTATGAACCCTCGCCATTATT 224790 36 100.0 30 .................................... AATAAAAGCGTTTTATGGTGGTCGATGGCA 224724 36 100.0 31 .................................... TAAACTATAATCACTAGGGCTAGCACACTCA 224657 36 100.0 30 .................................... AGATACTAATAAACATAAATGGGGCTTTAT 224591 36 100.0 30 .................................... TTTAGTAGTATTTTCTACTTTTTTTATAGG 224525 36 100.0 30 .................................... TCTACATTTTCAGGTTTGAAAGTAAATTCA 224459 36 100.0 30 .................................... ATCAGAGTTTGACTTCTTAGCATGTTGTAT 224393 36 100.0 30 .................................... AAATCTTCAGGAAAAGAACCATCGTCGTCA 224327 36 100.0 30 .................................... AGAAAAAGATAACTCAAAAGAAAGAAATAT 224261 36 100.0 30 .................................... ATCAGAGTTTGACTTCTTAGCATGTTATAC 224195 36 100.0 30 .................................... TTTTTAGTTTCAAAAGCTATTGTGTTTTTT 224129 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 20 36 100.0 30 GTTTTAGTCTCTTTTTAAATTTCTTTATGATAAAAT # Left flank : ATAGCAGCGTTAATTCCTGCTTTTTTTATTTTAAGGTATTTGGGTATAGAAACTTTGATTTTAGTAGCGATTTTACTTTTTTTAATCTCTATTAAAGTCATCGACCAATACGAAAAACAAACAGGCATACACGATGATAAACACATCGTTATAGATGAAGTTGTCGGGGTGTTTTTAGCCTTAGCAATTTGCGGACAGAGTGTTTTTACCTTTTTACTTTCTTTTGTTTTGTTTAGATTTTTTGATATTACAAAACCTTCTATCATAGGTAAAATTGACAAAAAAACCAAAGGTGGTTTAGGTGTAATGCTAGATGATGTTTTAGCGGGGATTTTCGCAGGATTATTCTCTGCGGTGATTTATGGAATTTTGCTTAAATTTGATCTTTTGTGGTTTGATATAAGCATTATGGAGATATTTTAGCTTCATAAATTTGTGAAGCTATTTTCTAATTTTCTTTAGAGCAAAATAACAATAATTCTAATGGTATTTGCTATACG # Right flank : AGACTTTTATCAAACAAAGAAAACTAGATGTTTTTTTATAGAAAAAAACCTAGAATATGCTATAATTCTTGCTAAAGAAATTTAAAAAGAGACTAAAATAAGTGGTTTTTGGTCATCCACGCAGGGTTACAATCCCTTTAAAACCATTAAAATTCAAATAAACTAGGTTGTGTAAACTTAGTTTTTTTCTTTTCTTTGTTTATTTTTTCATTGCCATATTTAAAATCTTTACTTTTTTCATCATATTCAAATAAAACTAGATTTTTATCATCATTCATTTTTTCATTAAAAGAAACTCCACCTAAAAGAATTTGCATATTATCAAACTGTTTTTCTGTTATAGTTAAAACTCTTATATTTCCATAAGGTGGTAAAATTTTCTCTATCGATTTTATCGTTGTTTTTGCCGAAGCTGATCCTTTGCAAATTTTCACATACACGCTAAATTGCATCATGAAAAATCCAAGCTTTATCAATGAGTTTCTAAATTTATTTGCGTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTCTCTTTTTAAATTTCTTTATGATAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: R [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [76.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //