Array 1 12611-12970 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCSQ01000117.1 Pseudoalteromonas sp. PS5 Ga0072484_1117, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 12611 32 100.0 34 ................................ TTCACCGTTACGCAGTTTTTCAACTATCTCAATA 12677 32 100.0 34 ................................ TCGTTGTAATTTAATGATACTCGTTGGCTTACCC 12743 32 100.0 33 ................................ CTGTCATTTTCAACCTGCAACAAAAGTTAACTT 12808 32 100.0 34 ................................ AACCCCGCTTATATTGAACTCGCCTGAAATACAC 12874 32 100.0 33 ................................ TGAACACAGTAAGCATCATGCAGAAATTGAACG 12939 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ================================== ================== 6 32 100.0 34 GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Left flank : TGCGTGTACTTGAAGTAACACAGCAAGACCTAGATTGGCAGCAAAAGCTGCACACGTTTCAAGCGCAAAAACAAACCATTTTAGCCGAGTATGGTAATACCCCAATGGCAACAGAGCAGATTGAAGCCCTATTAATAAAAAGTTTTACTGAAAATGAACGCAAGCGAGTGGCTGTATTGAGCAAATGATCCATGCTGATAGGCACAAAGCGTGTGTAGCGTGCGTTGTTAGCTGTACTGACAAATTATTGCTGTATATAAGTCGCGATTGACAGAGGTTAAGTTTTTTACATAGTGTATGGTATAAAATATGAAGTCGATTAAATCGCTAGGGCAGCGTACTCATCAAAACCCCAGGGATCTAGCGATTTTATAAGTTATTTAAAAATATGGAAAAACTTCTTTTCTTTGTCAGTTAAACGGGCATTAAACCCCATTTAACTGATAGTTAGCGGAAAACAACAATCCGTACTAGGGTTGTTGTGCCTTGAAAGCAAGGCG # Right flank : CCCTATCCTTATCCCCCTTGTCTCGATACCCCAGTCGCGCCTCCCGCAGGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 1 285-56 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCSQ01000123.1 Pseudoalteromonas sp. PS5 Ga0072484_1123, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 284 32 100.0 33 ................................ AGGCGTAGCCGACTGGGGAAGTAACATTCCCCT 219 32 100.0 34 ................................ CCAACCATCCAATAACAAGCCTCGTATGACGTCA 153 32 100.0 34 ................................ ATTGCGACACTCCTCGATGAACTCTTTAATGGTG 87 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ================================== ================== 4 32 100.0 34 GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Left flank : TTTGTGATTAAAAAATAAGGATTATGAACCATGATGGTATTGGTCACTTACGATGTCTCGTTTACTAGTGAAGATGGGCAAAAGCGCCTTAGGCAATTAGCAAAAGTATGTTTAGATTATGGCGTTCGCGTACAATACTCTGTATTTGAGTGTGAAATAGATGCAACGCAATGGCTAACATTTAAAAATAAACTGCTCTCTATTTATGACCCCGAAGTCGACAGTTTACGTTTTTATAAGCTTGGCAAAAATTGGCATAACAAAGTTGAGCATCATGGTGCTAAAGTTGCGTTAGATATTTTTCGTGACCCATTAATTTTGTAATCGCTAGGGCTTGGTTCTCATGAAATCCCTGTGGATCTAGCGATTTTATAAGCTCTTTAAAAATATAAGAAAAATTTTATTCTTGGTGATTAGCTCTAAGGATATTGATACATTTGCTCATGGCTAGCGGAAACCTCTACACCATGATAGTGTATTTGTGCCTTTGAGAGAAGGCG # Right flank : CCGAGCCGTTTAAAAACACCACATTGGCCAGCTGGTGTCGCGCCTCCCGCAGGCGC # Questionable array : NO Score: 8.86 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [33.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA // Array 1 55-744 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCSQ01000266.1 Pseudoalteromonas sp. PS5 Ga0072484_1266, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 55 32 100.0 33 ................................ CAGGCAGCAAAGTCATTTATAAACTCTGAGGTC 120 32 100.0 34 ................................ CCATCATCAAAAAGAGTTACTGTGAGATTTGCAT 186 32 100.0 34 ................................ ACTTCAACACCCTGAGGCAGCTGTCTAGTAACTT 252 32 100.0 34 ................................ TAACTCATCGATATAGGCTTTTAAGTCAGATTTG 318 32 100.0 33 ................................ GTGCCGGAAATTACGCCCGATGAAGAATTAATC 383 32 100.0 34 ................................ TATACTATGTTAGTAACAATTGCATATCGTCACG 449 32 100.0 33 ................................ GCTTGGTGCGAATGGTTGCGGTTCGTTTATTGC 514 32 100.0 35 ................................ GAAATCAACTCTGGAAACTCATGGTCAGACACTCG 581 32 100.0 34 ................................ TAAGTTAATAAAAATCTGGTTTCCGTGAGTTGGG 647 32 100.0 34 ................................ GACAACGAAGGCGCATATTGGGAGTTTGATATTG 713 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 11 32 100.0 34 GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Left flank : CAGGCGCGTGGATTGAAACGCTGGCAAGCTACGTCATATCTCTAAAAACCGTTAG # Right flank : CCGTTCCTAAGGGGGCGTAATGTCTAATTTTTTGGTCGCGCCTCCCGCAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [46.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 1 8207-7846 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCSQ01000057.1 Pseudoalteromonas sp. PS5 Ga0072484_1057, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 8206 32 100.0 34 ................................ TGCGCATATAGCAAAGCATTACACTGGCGTGACA 8140 32 100.0 33 ................................ TCGCATCGACGCCCTCACCGCCAACCCAAAAAC 8075 32 100.0 34 ................................ ACTCTCCAAACACTGTTAAGTCTAGTTCATAGTT 8009 32 100.0 34 ................................ TCTGTAACTGGCTTGCTCAGGATCACGCTGATAA 7943 32 100.0 34 ................................ AAAGTGAATCGTTTGATATCGACGTTGTTTGCCC 7877 32 90.6 0 .............T.............AC... | ========== ====== ====== ====== ================================ ================================== ================== 6 32 98.4 34 GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Left flank : CAGGCGCGTGGATTGAAACCTTGAGTTTATCACGAGCAATGACCAACTCCTT # Right flank : CTCAGTGAATAATGTGAAATTCAGTGTTTAAGCTGATTGTGTCGTTGTTTGGTAAATGAGGCGTAATGGGTTTTTGATATGTTATCGCTTTCTTTATTCAAAAGAGGAGGTGGCGGCAGGGCGAGACTCGAACTCACATCATATACTGTGTATAACCGTTACCCATTGGAAACACTGCCGCACTCTCCTACTTTGTCATACTATTTACAAAATAGCTAACACGTTTTTAATTGCTTTTGTAAAGCTCATGCCGATTATTAGCTGCTAAAAAGTTAGCTTTTATTTCAACATCTTATTGTATAGGTGAGATTGTAATTGTACTTACTGTGATGGTGATGCGTAGAGTATTTTCCATGTTAGGGGCTGGTATGCTTGTTAACATATTGGCATTTTGCCTCTTCGGTAGTGTACTTTTGCAATTTTATCTATGTACTTTATCGTGAGATACTTGTCTTTATAATTAACTAAATGTAATGTTTGGGTTAAATGTAAAAGGATAG # Questionable array : NO Score: 9.18 # Score Detail : 1:0, 2:3, 3:3, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA //