Array 1 1068-3655 **** Predicted by CRISPRDetect 2.4 *** >NZ_VMQT01000013.1 Klebsiella pneumoniae strain K K_S2_L001_R1_001_contig_13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1068 29 100.0 32 ............................. CTGCTGACGACGTGGATCCGCTGGAACGTCAC 1129 29 100.0 32 ............................. TACTGGCAACGGAATTCGGTTCGACGTTTATG 1190 29 100.0 32 ............................. CGCTCCCCAGGACAAACGCGGTCTCCGGATCC 1251 29 100.0 32 ............................. TTGCACGCACGTGAATAGTCCAGGCCGCCTGG 1312 29 100.0 32 ............................. TCCAGCGTGTGCATCTCGCCGATCTCTTTTTG 1373 29 100.0 32 ............................. TAGGGTATCCCGTTCTCATCCACGGCAATATG 1434 29 96.6 32 ............................T TGAACTGATCAAGGGGCGGCTTCAGGCAATTG 1495 29 100.0 32 ............................. AGTAACGAAACGGTCGCACTCAACCGCGCCGC 1556 29 100.0 32 ............................. TCTTGTTAGTGATTGAGTAGCCCATCTGGGAC 1617 29 100.0 32 ............................. CTACCCGTAAAAAAACCGCTGCCGCTGTCGCC 1678 29 100.0 32 ............................. CTCTTAATGGAATTCGTGAAGACGCTGGCCTT 1739 29 100.0 32 ............................. ATCTGGCGAGATTTTACGGGAAATAATATCCC 1800 29 100.0 32 ............................. GTTTTGACCGAGTATATCTGGCGGGATACCCC 1861 29 100.0 32 ............................. GTCCTGGCTGACCCGGACGAATTTGTTGTGAT 1922 29 100.0 32 ............................. GCGGTTTGCTATCAGATGAGCCTGTCATCAAA 1983 29 96.6 32 ............................T GCTGCACGATGTGATTGAGAGATGCCGGGAAG 2044 29 100.0 32 ............................. GGTTTATAGAGGCTGAGGTATTCACAATGCGC 2105 29 100.0 32 ............................. GGCCTGAACCAGAGCACGATCTACACCTGGAA 2166 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 2227 29 100.0 32 ............................. GTTGCGAAGCCTACGTCCAGATCGTAGAGATA 2288 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 2349 29 100.0 32 ............................. AGCTGCGTGACGTTGAAAAAGATGGCTGCGGG 2410 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 2471 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 2532 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 2593 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 2654 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 2715 29 100.0 32 ............................. TCTTCGAGTTCAGGCCGGTATCCCACTCGCTC 2776 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 2837 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 2898 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 2959 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 3020 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 3081 29 100.0 32 ............................. TACAGGACGCACTGGCTGCGAAGCCGTTCGCG 3142 29 100.0 32 ............................. TCGCTCTGTGTCATACGGTTATTAGCCCTGGA 3203 29 100.0 32 ............................. AATTTGCTCATAGAATTGAGACAGTAAACTTT 3264 29 100.0 32 ............................. CCGAAATGGATACCGCCGCGATTGAGTATTCG 3325 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 3386 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 3447 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 3508 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 3569 29 100.0 29 ............................. GGGGTCACTTGGGTGAAACTGAACTAACT 3627 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 43 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCTTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCAACACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //