Array 1 165786-168378 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP038441.1 Aeromonas media strain T0.1-19 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 165786 29 100.0 32 ............................. TTCTGATGGGCTGCTTACTTGTGTCTGAATTG 165847 29 100.0 32 ............................. CATTCATGGGGAATCCGTTCGATCCGCTTGGT 165908 29 100.0 32 ............................. AGTGGTCTGGTAGTAGTTCGCCACTTTGCCAG 165969 29 100.0 32 ............................. CCCGATGGCTTCATCCACCGAGAGCAGCAAGC 166030 29 100.0 32 ............................. CCGCCGATGTTGCCGAGTGCATGAGCGAAACC 166091 29 100.0 32 ............................. AGATTCCAATGTTTATATCTGAAATGGATGAA 166152 29 100.0 32 ............................. GCGACTTCTGTCCACTTAACAGACCTTCCCGT 166213 29 100.0 32 ............................. CGCTTTGGGACCAGTTAGACAAAGACTGGAAA 166274 29 100.0 32 ............................. ATGGCAAGTTTTACCTGCCGGACGATTTCCTG 166335 29 100.0 32 ............................. GCAATGAGTAACGAAACGGATCTGGACTGGCT 166396 29 100.0 32 ............................. AATCTGAGCCGTCCCCATTCGGTGACAATGTG 166457 29 100.0 32 ............................. CGCGATAGCCGCCCACAACGCAGATGCGTCAG 166518 29 96.6 32 ................T............ TGTTAATGGGAGAGTAAAACATGTGTCTAACT 166579 29 100.0 32 ............................. GCGGCCACCAATTCCAATACGGAGCGCCTCAA 166640 29 100.0 32 ............................. GAAACGGTAGTGGTTCCGTCATCCGATCTTGG 166701 29 100.0 32 ............................. GGGCTGGCTAAGGTCGTCATAGACCTTCCCGT 166762 29 100.0 32 ............................. TCTTATGTGCCTACTGCGGAGATTACGTCGTG 166823 29 100.0 32 ............................. TACGAGTTGAACACAGCAGCGGTTCTTGCTCG 166884 29 96.6 32 ............................T TACCGGCGCGAGCGCGCGTCCCGACATCAACC 166945 29 100.0 32 ............................. GTGCGGGAGGTGTACCAGAGCAAATGAGAAAA 167006 29 100.0 32 ............................. CGGACGACAACCTTCGGCACCTTCGCCATGTG 167067 29 100.0 32 ............................. CTGGCGCTCATCGTCACAGAGCGGATTTACAA 167128 29 100.0 32 ............................. CAGGAGTGACTCCCTGACTCCATCCAGCTACA 167189 29 100.0 32 ............................. TTCTACAGCGGGACAGGTTCAATGCTATGGCC 167250 29 100.0 32 ............................. GATTTGGCTTCTGAATTTCAAACTTCAATTCA 167311 29 100.0 32 ............................. TCGGAGTTCACCAGTGAACAGCAGCGCCTGAC 167372 29 100.0 33 ............................. CGGATCACGTCCTTGTCTGACCGGATGTCGCCA 167434 29 100.0 32 ............................. GATCAGTCCTACAACTGGGCCAACTTCACGAC 167495 29 100.0 32 ............................. CTGACACCCGAGCTACAGGAAGACCTGGACAA 167556 29 100.0 32 ............................. GTCTTGGCCACGGCGGCGGACGGGGAGGTGAT 167617 29 100.0 32 ............................. AGGGTCGTATTGTTTACCCAAGAACGTTAAAT 167678 29 100.0 32 ............................. AAGCCGGAGCGCCCATCATATGACCTGCCGAA 167739 29 100.0 32 ............................. CTGGGGGAGCTGCGGACCAATGTCGGGCTTGC 167800 29 100.0 32 ............................. TCGGTTCCCCTGGCGAATACCTGGGCTCCCTC 167861 29 100.0 32 ............................. TAGAAACCGATTCACCAGCAATGGTTAGGGCG 167922 29 100.0 32 ............................. CCAGCCTTGGGCGGCCCTGACGGTCGGGCGAC 167983 29 100.0 32 ............................. CGTGAAATTGAGGCTCCCTCTGTGATTACCAC 168044 29 100.0 32 ............................. GCCCCTACGCTGTCCGCTCCTGCGTTGTTGAA 168105 29 100.0 32 ............................. CGTTCGCCGAGCACTGCAAGGCTGGCGGAAAA 168166 29 96.6 32 ..........................A.. GGTGTTGCTGCGGATTTGTACACAGCAACAGG 168227 29 100.0 32 ............................. AACTTTAGCTTGGTTCGTTCGTCGGCCTTGAT 168288 29 100.0 32 ............................. AACGTCGAGCTGCATATCAGCCCGTTCCTGCC 168349 29 82.8 0 ......................CACGG.. | A [168371] ========== ====== ====== ====== ============================= ================================= ================== 43 29 99.4 32 GTGTTCCCCGCGCCCGCGGGGATGAACCG # Left flank : CCGCTTATCGAGGAGGTGCTCTCGGCCGGGGGCATCACCCCGCCAGACGCCCCTGCAGATGCCCAGCCGCCAGCCATCCCCGAACCCGCCGGCATTGGGGATGCCGGTCACAGGAGTCAGTGATGAGCATGCTGGTGGTGGTCACCGAGGATGTGCCGCCGCGCCTGCGCGGCCGGCTCGCGGTCTGGTTACTCGAGGTGCGTGCCGGTGTCTATGTGGGAGAGGTGTCGCGCCGGGTGCGAGAGATGATCTGGCAGCAGTGCGAGGCTTTGGTGGAGCAGGGCAATATCGTGATGGCCTGGCCCGCCAATAACGATTCTGGTTTTGACTTTCAAACCCTGGGGACCAATCGCAGGGTGCCGGTGGACCTCGATGGTTGCCGATTGGTCTCTTTTCTACCCATTGAAAATCAATAGCTTAGCGTTCATTAACAATCTGGACTAGTCGGTGGGTTTTCTATGGTTGGGAAAAGCCATAAAAATCAATAGCATCTGTTAAGT # Right flank : GTGTCGAATGGTCTGTTTATCAACGTCGAGCTGTTCCCCTCGCCTGCGGTCTCTTCGGCATGGCATGCTCTCGATTACGTGCTAGGGCAATCGTTCCGGCTGTCATTGTTTGATGAGCAGCGCCATCGAGATGGGCAGCGAGAGCTGATGGTCTATTTCTAATAAAACAGCTTTAATTGGGCGCGTCGGATCTCAATCTTGCTTGTTGTATCGTCAACCTCGGAGGCCATCGTCGAGGAGATCATCGGATCACTTTTGAGATCACCCGTAACGAAACAACCGAAATTTGGCGTCAGCCTTTGAGCCACAGGTTTATGTGTCTTCAGCGCCCCCAGCCCAAACAATCCAAACCACCCCAATTATTACCAACCCTAGGCAGGATGCGGCTTTGTTCGTTACCAGCCTTCTAGGGATAGGTGATCAGCCAAGGCTGATCTGATCAAACAAAGCGATCAGACAGAACGATCTGATCAGGTAAAACTGATCTGATCCAATACACC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //