Array 1 18595-18894 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV798693.1 Lactobacillus sp. HMSC064F12 Scaffold286, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 18595 36 100.0 30 .................................... TTGAATAGTGTTATTCAGGGTATGCAAGAC 18661 36 100.0 30 .................................... CTGATTCGCAAAATCCCGGGCGTGGGCTGA 18727 36 100.0 30 .................................... ACAATTACCCCAGATTGACCCAAAACGTCT 18793 36 100.0 30 .................................... AACTGTTGATACTCTTGAATATAAAGGGGT 18859 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 5 36 100.0 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Left flank : GATAGTTTAAACAAGCTGTTAGATCAGGTTAAGGACACATCGTTAGAATTACTTCTCATTGAATTTTCAGATGTCGAACGTGGAAAGTTTTTTGAGAAATGCCAGTATATCTATATTGACAAAGATTTCATGGATAACCGTGAACTGATTGATTAAGAGACTGTGTGAAAACACCGGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACGTTTCAATTGATTTGGATATAAATTTGTTTGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACGTTTATGCAAGAGAGAAGGGACAAGTTTTTGTCTCAGGTAGATGTCAGATCAATCAGTTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGTAGATGTCAGATCAATCAGTTCAAGAACTGTGTCGATGAGTTGGCTGCAGGCGATTGC # Right flank : CCAAAAATGTCAATGTGTCGATGACCTGGCTGTCTCAGGTAGATGTCAGATCAATCAGTTCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGGTAGATGTCAGATCAATCAGTTCAAGAACTGGCTGGCAAATTGTTGGAGATGCTTTTGCGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACTTTGGCTACAAGCATGACCCAACGGCAGGGGTCTCAGGCAGATGTCAGATCAATCAGTTCAAGAACGTGTCCAACTTAATATCTGACCACTTAATAGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACTCTTCTGCCATATCCTGACCCCCTTAAAGAGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACTGTCTCCCACGGAAAAGTGGCACCTAAAAAGTCTCAGGTAG # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 2 19053-19484 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV798693.1 Lactobacillus sp. HMSC064F12 Scaffold286, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 19053 36 88.9 30 NNNN................................ TGGCTGGCAAATTGTTGGAGATGCTTTTGC 19119 36 100.0 30 .................................... TTTGGCTACAAGCATGACCCAACGGCAGGG 19185 36 97.2 30 ........C........................... GTGTCCAACTTAATATCTGACCACTTAATA 19251 36 100.0 30 .................................... TCTTCTGCCATATCCTGACCCCCTTAAAGA 19317 36 100.0 30 .................................... TGTCTCCCACGGAAAAGTGGCACCTAAAAA 19383 36 100.0 30 .................................... ATGCTGGTGATGACACCGACAACCAGAAGG 19449 36 88.9 0 ................................NNNN | ========== ====== ====== ====== ==================================== ============================== ================== 7 36 96.4 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Left flank : CAGTTCAAGAACTGTGTCGATGAGTTGGCTGCAGGCGATTGCGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACTTGAATAGTGTTATTCAGGGTATGCAAGACGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACCTGATTCGCAAAATCCCGGGCGTGGGCTGAGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACACAATTACCCCAGATTGACCCAAAACGTCTGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACAACTGTTGATACTCTTGAATATAAAGGGGTGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACCAAAAATGTCAATGTGTCGATGACCTGGCTGTCTCAGGTAGATGTCAGATCAATCAGTTCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGTAGATGTCAGATCAATCAGTTCAAGAACTGTATTTTGTACCCCCGTGTTACTTGACGGGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACTGATGGTTTTGCCGTCCGGCTTGACAATCCGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACGCCAATTGAATAGGCCAGACAAAAATTGCCGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACGACTTGGCGGATCTCGTTGTGCTTATTGCGGTCTCAGGTAGATGTCAGATCAATCAGTTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGGTAGATGTCA # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [4-4] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 3 19576-19875 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV798693.1 Lactobacillus sp. HMSC064F12 Scaffold286, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 19576 36 86.1 30 NNNNN............................... TGTATTTTGTACCCCCGTGTTACTTGACGG 19642 36 100.0 30 .................................... TGATGGTTTTGCCGTCCGGCTTGACAATCC 19708 36 100.0 30 .................................... GCCAATTGAATAGGCCAGACAAAAATTGCC 19774 36 100.0 30 .................................... GACTTGGCGGATCTCGTTGTGCTTATTGCG 19840 36 86.1 0 ...............................NNNNN | ========== ====== ====== ====== ==================================== ============================== ================== 5 36 94.4 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Left flank : TCAGTTCAAGAACTGGCTGGCAAATTGTTGGAGATGCTTTTGCGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACTTTGGCTACAAGCATGACCCAACGGCAGGGGTCTCAGGCAGATGTCAGATCAATCAGTTCAAGAACGTGTCCAACTTAATATCTGACCACTTAATAGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACTCTTCTGCCATATCCTGACCCCCTTAAAGAGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACTGTCTCCCACGGAAAAGTGGCACCTAAAAAGTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAACATGCTGGTGATGACACCGACAACCAGAAGGGTCTCAGGTAGATGTCAGATCAATCAGTTCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGGTAGATGTCAGATCAATCAGTTCAAGAACCTTAGAATAGCTTTATTGATTTGGTTATTTGTCTTAGGTAGATGTCAGATCAAAAACCTTCAGTGAAACCTCACCCCATAAATGCTATGCAAATCCCAAAAGAAGGCAACAGCATTGTCAAAAGCAAAACTAATCCTTTCCCCAGCCTTTTACACTGATCTCAAAGAAATCCGTCACATGTACCAACAGGCGTTCAAATCACTTTACGGCAAATATCAAGATCGGGAAACCAATCCCTACTGTGAATCGTTGGAAAGCTTACAGAAAAAGTTCAAACGGCCTAACAATGCCTTCTTCTTTATAATCGTTAAAGATAAACACATAGGCCTGATTCGCGTTGTAACAGATCGCAAAAATTCGGCAGCCCGTATT # Questionable array : NO Score: 5.78 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [5-5] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //