Array 1 52773-56761 **** Predicted by CRISPRDetect 2.4 *** >NZ_FWGV01000007.1 Klebsiella pneumoniae strain VRES0134, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 52773 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 52832 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 52893 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 52954 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 53015 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 53076 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 53137 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 53198 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 53259 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 53320 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 53381 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 53442 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 53503 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 53564 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 53625 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 53686 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 53747 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 53808 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 53869 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 53930 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 53991 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 54052 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 54113 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 54174 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 54235 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 54296 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 54357 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 54418 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 54479 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 54540 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 54601 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 54662 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 54723 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 54784 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 54845 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 54906 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 54967 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 55028 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 55089 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 55150 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 55211 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 55272 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 55333 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 55394 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 55455 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 55516 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 55577 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 55638 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 55699 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 55760 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 55821 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 55882 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 55943 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 56004 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 56065 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 56126 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 56187 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 56248 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 56309 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 56370 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 56431 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 56492 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 56553 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 56614 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 56675 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 56733 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 66 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //