Array 1 558596-560364 **** Predicted by CRISPRDetect 2.4 *** >NZ_CADFCW010000001.1 Burkholderia gladioli strain BCC1883, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 558596 28 100.0 32 ............................ TGAACGTCTCAGGCTTGGGGAACACCACGCGC 558656 28 100.0 32 ............................ TCTCGCGCATCACGCTCGAAATCACTGGCGTG 558716 28 100.0 32 ............................ TGGGGGGCTCCGGCGACTCAGGCGATTCCGAC 558776 28 100.0 32 ............................ GCCGTTCGCGCGGATTCTGCGATTACGACGAC 558836 28 100.0 32 ............................ TCAAAGAAAAAGGGCCGCACTCGGCGGCCCTT 558896 28 100.0 32 ............................ TCCTTGCGTCTATCATGAGGGCTGATGGACGA 558956 28 100.0 33 ............................ CAACAACGTTCCGCCGCGCTCGGTGATGCTTTT 559017 28 100.0 32 ............................ TCGCAAGCTACAGGAGAACGACGTGAACGACA 559077 28 100.0 32 ............................ ATGCGATTGGTGATGATCGCGCCGACCGAGCT 559137 28 100.0 32 ............................ ATTGTTGGATCGTCTGATAGACCACGCCAACG 559197 28 100.0 32 ............................ GCTGAGCGAAAGCCCAGCGGGCTTTTTCATTT 559257 28 100.0 32 ............................ TAGGAGAGGGCGATGAAGACCACACACGCGAA 559317 28 100.0 32 ............................ TTCTGGCAGACCTTCATCAGCATCGTCACATC 559377 28 100.0 32 ............................ AGCTCCGGCGCGGCCCCGATCAGCTTGGCGTT 559437 28 100.0 32 ............................ ACTGTACGCATATACAGCTACGGAGGCCAACG 559497 28 100.0 32 ............................ TGTGGGAGCGCTTGCAGGGACATCAACCTGAA 559557 28 100.0 32 ............................ ATCCGGCGCTTGGCCTTTTCGATAAAGTAGCG 559617 28 100.0 32 ............................ TGAAGCGAAGTCGGCCGAGAAGCGTATTCGCG 559677 28 100.0 32 ............................ CGTCTGGCTACGTGACTACCGAATCAGCGTTC 559737 28 100.0 32 ............................ TGGAAGCCCTGGAATACGCCGTGGGGGCAATG 559797 28 100.0 32 ............................ ACGAGCTGCTCGCAATGCGGCGCGGCGCTGGG 559857 28 100.0 32 ............................ TCGACGTAGCCGGCCAGCTGGCGCGGGCCAGG 559917 28 100.0 32 ............................ GTCTCAAAAAGCCAGCGCGGGAATTGCACTAG 559977 28 100.0 32 ............................ GATTGTTCAAGAACGGGGCGGATACCGGCGTC 560037 28 100.0 32 ............................ CACACAGGCGATTCACCGAGGTGCGACATGAA 560097 28 100.0 32 ............................ GGCGGCAGAGGCGGAATTGCGGGCGCGGGACA 560157 28 100.0 32 ............................ GGCTTCATCGAAAGCCGCGTGCATCGAGACGC 560217 28 96.4 32 ....................G....... AGGATGCCGGCAGGGATGGCTAAGACGACCGG 560277 28 92.9 31 .........................T.G GCACTGCTGCTCGCGGGGAGGTGAGAGGTGC 560336 28 92.9 0 ...........A.C.............. | T [560360] ========== ====== ====== ====== ============================ ================================= ================== 30 28 99.4 32 GTTCGCTGCCGCGTAGGCAGCTTAGAAA # Left flank : ATGGTTTGCATTCGCTGATGGCGCAGTCCTGGCTGCAGGGGATGCGGGATCACGTGGCGATCGCGACGCTGGCGCCCGTGCCGGACGGCGCGATGCATCTGGTCGTGCGACGACGGCAGTTCAAGACCAACGCGGACCGTCTGCGGCGGCGACGGATGCAGCGCAAAGGGGAAACGGCCGAGCAGGCTGCCGCGCATATTCCCGATTCCGTCGAGCGTCGGCCTGATCTTCCGTATGTGCGTCTACGCAGCGCGAGCACGGGACAGGTGTTTTGCCTCTTTGTCGAGCAGGGGGGCGCGGTGAGCGAGCAGGTGCCTGGGGCGTTCAATGTCTATGGGCTGAGCCAGGGGGCGACGGTGCCCTGGTTTTAACCCTTTTCTTAGGCTGATTTGGTTGGCCTTTGAAATCAATGGGTTAGCGAGAGGGCGGAAATTTGGGTGGTTTGGCCTTTCGCGGGTGTTTGTTGTTTGGAAACAAGGGGTTGGAGGGGGAAGGGGATA # Right flank : ACTGCGATATGAAAGTCTGGCAGACAGGCAAGCTTTGCCTCCAGCGCGCGTGTTTTAAAATCGCAGCGCCAACGGCATCGTCACCGAAGTCGTTGATATGACGAGGCATCCTCGCAGACTGGCTCGAATACCGAGTCGTCCGCGATTCGCGCATGTTCGCACCCGATCGCGGCACCGGCAGCGCCACAAACCAGACAAGAGAGAGGACAACAGGCCGATGACATTCAATCGCAAGATGGCGCAGTGGACGGCAGCCGCATTGGCCATCACCTGCCTGCAGGTGACCAACGCGAACGCACAGACCTTGAACATACCGCTCGGCACGCCCGACGGATTCTCCGCATCATCGATCAAGAACGTGGGCCAAGACCGCTATTGCATCAGCGGCCGCGTGTACGACGACGCGGGGCCGAGCAATACGGCGATGGCCGTGCTGGTGGACGCCCGGCATCGTACCGTGTCGTGGAAGACCTCGATCCCGCATCCGCGCGACTACGCCG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGCGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //