Array 1 254804-252918 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHOHM010000002.1 Bacteroides sp. MSK.18.83 NODE_2_length_372369_cov_152.834, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 254803 47 89.4 28 A.........A....T.........A..............A...... AGAAATTAAAAAAAAGTCAGCCAGCAGA 254728 47 100.0 30 ............................................... ACGAACATGTAACACATTTGGAAGATTAGA 254651 47 100.0 29 ............................................... ATAAAATTAGGGTCATAACACATTGACGT 254575 47 100.0 29 ............................................... ATTACAAAAAAGTACATCTTCACAAAACA 254499 47 100.0 29 ............................................... CGATGTGGTTATGTACGAGGCGGCAGCGC 254423 47 100.0 29 ............................................... ATTCTAAGGTGGTTATAAATTCGCATGCA 254347 47 100.0 29 ............................................... CGACCATTGCTGGGCTTTCTTTTCATTGC 254271 47 100.0 30 ............................................... AGCAAACCAATAATATAAGATTCCTCATCA 254194 47 100.0 30 ............................................... AGCAAACCAATAATATAAGATTCCTCATCA 254117 47 100.0 30 ............................................... AGCAAACCAATAATATAAGATTCCTCATCA 254040 47 100.0 30 ............................................... TTTACTACAATAACCCTTGACGCAATCCGG 253963 47 100.0 30 ............................................... GATTGTCATATAATTTTCTTAGTCCATCCG 253886 47 100.0 30 ............................................... AGTATACTCGCTTACCCCTGAAAACTTTAT 253809 47 100.0 30 ............................................... CATTTGCGTTAACACAGTATTAGCCTTATT 253732 47 100.0 30 ............................................... CTAATTTACAGGAACGAGTAAGAGAATATA 253655 47 100.0 29 ............................................... TACATTAATCCCGCCTACATCTAAGCGGT 253579 47 100.0 30 ............................................... ACATATGGCTGTAAAATTTCCAGATAGGCT 253502 47 100.0 30 ............................................... CGCGTATTCGATAACTGGGATCGCGAGAAC 253425 47 100.0 30 ............................................... CACCTTCCTCTAAAGCGCCTGCACTTTCCT 253348 47 100.0 30 ............................................... TAAGGAAGTTGTATACTTTTTGTGATAGGT 253271 47 100.0 30 ............................................... CACAGCGGGATAACCCCGCTGTCTTTTAAA 253194 47 100.0 30 ............................................... TAGTCTTCCCACATAGAACGAAGAGTTACC 253117 47 100.0 30 ............................................... TAAATCTCAATTCTTTTCTAGACCAGTAGT 253040 47 100.0 29 ............................................... ACAAACCATAATACGACAAGGAAGCTTTT 252964 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 25 47 99.6 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Left flank : AGGATCTCCTAGATGTTTTGTTATAATCTTATACTGTTTCATCGTCAAATAACGATGATTATACGGCATATAACCAGTCGGTACAAGCTCTTTGGTCAACGGGTTACAGTCTTTAATCCATCGGCTCAGACAACGCACTGCATTTTTACTGGTCGTACATCCGGGGAAGTACAATGCAGCTAATACAGCAAAAGATAAGATTCGTCTCATTTCGTTTTTAAAGTTTTAATTTGTCGTTTCATTGTTTCTTTCGTTCTACAAATATACAACATCAAAAAGCGTTTGTCAAGTCATTTGGGATTTTATCGTTAATATAAAGGAATACCCACCTTTATTAACCCAATTACTAAGCAATTGAAACAGATTGAGCATTCTCAATATTTAACGCTAGAATTAAGTCTAATGCTCACAAAAAGAAACTTAAAAATACTTATACGAAAATGACAATCTTTAAATCACAAGAAATAACATGTTTATATTAAAAAGAGATACATGAATGG # Right flank : ACATTTCATATAATAAGATGTAATTCAATTAGTTACAAAGAAGATTAGAAAAGAAAAAAGAAGACTGTTCCCAACACAAAATCTCGCATTAATGCGAGATTTTGTGTTCTAAAACAATTCCAATTGCTGCCCTGGTGTATTGACACTCTGCGCCTTCTTTCCATAGAAAAGTTCTATGTCCCCAAATTGTTTATCCGTAATACACATGACTCCGACATGCCCTAGTTCCGGAAGGAAAGATTTAACTCTTTTTATATGTACTGCTGCATTCTCGCTACTAGCACAGTGACGTACATAAATGGAAAACTGAAACATCGTAAAACCATCTTTTTGCAGATTCTTTCTGAAATCCGCATAAGCCTTCTTTTCCTTCTTCGTTTCAGTTGGCAAATCAAAAAGAACGAGCACCCACATTATACGATATTCACTAAGACGATCCATTACCGTTCGGGATAGGCAACTCGGCGAAGCTCTCCATTGAAACATTTATAAAGTGAGGC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //