Array 1 16165-17323 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMTY010000015.1 Lactobacillus gasseri strain 1001285H_161024_C10 NODE_15_length_43042_cov_42.5771, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 16165 36 100.0 30 .................................... ATTATATTCATCAAAGTGATCATATCTTCT 16231 36 100.0 30 .................................... AGTGGTGGTCAACAGACCAATGTATCTGTA 16297 36 100.0 30 .................................... TTCAGGTGGAAATTGATCGGCAATCTTTTG 16363 36 100.0 30 .................................... CCGAAAGGAGGGAAAACATGCCAAGTCTTA 16429 36 100.0 30 .................................... TTCTAATTGCAAGAATATTAGCTGTCTTCT 16495 36 100.0 30 .................................... AGCAAAGTTTCAACAATTGCTGATTCAGGG 16561 36 100.0 30 .................................... TCGAGTACACTCCACGAATGCCAGCTTTAT 16627 36 100.0 30 .................................... AAATATTGGTTAATTTTGTTACTTTATCCA 16693 36 100.0 30 .................................... TCAGACTCTTTTGTTTCTGCGTGTTTCTTT 16759 36 100.0 30 .................................... TCGAATTAAGACGGAAATACACGAATAGAG 16825 36 100.0 30 .................................... GTTAGATTGATAACTACACCCAGATGATCT 16891 36 100.0 31 .................................... TAAGTTTGCAACAGAGGGGCTCGAGCATGAA 16958 36 100.0 30 .................................... TGTCCTGTTTCACTGGTTATCCCAGTTATA 17024 36 100.0 30 .................................... TTCTTTTTCTTCTTGTACAGCCTTTTCATT 17090 36 100.0 30 .................................... GGAATAGCTTAAACCGTAATCACGGTTTCA 17156 36 100.0 30 .................................... ACAAACAGCCAACGAGCCTACAATTGAAAA 17222 36 94.4 30 ..........................A.....A... TTCGAAAAGTAGCTAGGCTGGCGGTGCCAA 17288 35 83.3 0 ........A...C.........T...A.....-..T | A [17304] ========== ====== ====== ====== ==================================== =============================== ================== 18 36 98.8 30 GTTTTAGATGGTTGTTAGATCAATAAGGTTTAGATC # Left flank : AATCAAAATATTTTTGATAAGTATATGCCTGTAATTATAAAAGAATACATTGAAGGGCTTAATGAAGCGGATCGTAATGAAATATTAAAAACCTACCATAAATTAGAGGGGATAATTCAAGATTCACTTCTACTTGAAGATCTACCATTAGAACTTGAATTTAATGAAGACTTGAAGAAGTTCTTAAAGATAGAAAATCTACATTTAGATACTAAGTTTTTAGAAGAGCCATATGCTATAATTGAATCGATCTTAAAAATACATCAAAACTATAATCTTCATTCCATACCTGTTGCCTGTAATGTAGCTCATTACTTAAATGTAGCTCAGGTAAAAATGTTAAATGATCTGTTAAAAGAAATGAAGTTGAAATTAATTTTAATAGAATTCACATCTGCGGATTTTCTGGTTTTTCCAAAAGATGTTGATTATTTCTACATTGATCAAGATCTTGTTGATTGGTACTAACTATCTAATTAAAAACTGATTATAAAATTTCG # Right flank : TTGTAGTGAGTTACGATAATTAGTCGTAATTACACTACTGGTCCATTGCTTTCGCAATGGACTTTTTTAATATATTCCAAACCATTTTTCACCCCTCCGGTGCAAAAGTTTGTTTTAAATGTAAGCGCTTGTTTAATACTATATAAGTGTCAAGAGAAATAAAAGAAAGTATTAATGGAGGATTTAAAAATGACTAAGAATGTTTTATTAGTATGTGGTTCAGGTGCATCATCAGGTTTTATGGCTGCTAACATGAGAAAAGCATCAAAGAAAGCTGGTTTAGATTATAAAATTCAAGCTCGGAGCGAAGCAGAATTAGGTGACTATGCAGATCAAATTGATGCCTTAATGGTGGGTCCTCACTTAAAGGCAGAGTTGGATGCAATTAAATCACAAGTACCTGACAAGGTAAAAGTAATTCTAATGAAGCCAGATTACTATTCAATATTAGATGGCAAAGCAGCCGTTGAAGACTTACAATCACATTTTACTGAATAAAT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGGTTGTTAGATCAATAAGGTTTAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTAGATGGTTGTTAGATCAATAAGGTTTAGATC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.90,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //