Array 1 2446616-2442422 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045180.1 Schleiferilactobacillus harbinensis strain LH991 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2446615 36 100.0 30 .................................... CACGGCAACAGCAACCGGCAAGCGGTATTT 2446549 36 100.0 30 .................................... AAGGGGTTAAGCAATTACCTCAATCGCTGA 2446483 36 100.0 30 .................................... GATGTTGATAAAAGCACCGTTGGTCAGTAC 2446417 36 100.0 30 .................................... CAGCGGCGCATTGACCCATTACCGAAGCCA 2446351 36 100.0 30 .................................... ATTCCCTATGCTTATGAAACTGGCAGTGAT 2446285 36 100.0 30 .................................... AGATGGCATTGGCTGGTTTGAAATTTACAG 2446219 36 100.0 30 .................................... AGTTGGGACTAGCATTGTACGCTATCAAGA 2446153 36 100.0 30 .................................... ATTCCCTATGCTTATGAAACTGGCAGTGAT 2446087 36 100.0 30 .................................... AGATGGCATTGGCTGGTTTGAAATTTACAG 2446021 36 100.0 30 .................................... AGTTGGGACTAGCATTGTACGCTATCAAGA 2445955 36 100.0 30 .................................... CGACCCGCTAAAATAAACACGTCGCCTATT 2445889 36 100.0 30 .................................... GCAGAAGGCCATTGAGGACGTCAAGGACGA 2445823 36 100.0 30 .................................... CATTGATGTTTTACAGAAACATCTGGATAT 2445757 36 100.0 30 .................................... TGTCATTAAGTCTCACTCCTCCAATTGAAT 2445691 36 100.0 30 .................................... CAAAATTGTACTATGAATACAGTCTTGCGG 2445625 36 100.0 30 .................................... CGGCCACGTCATCCACATCCGTTACATTGA 2445559 36 100.0 30 .................................... GGTCATGAATTTGGCTGGCAATTTACAGGG 2445493 36 100.0 30 .................................... CGTCAACCGCGCGCCGTTGGCTATGGTTAT 2445427 36 100.0 30 .................................... AGCGATGAAAATGGTACTTGGTGAACCCCA 2445361 36 100.0 30 .................................... GGTCAATGTTACGGATGACGCGATAAATCG 2445295 36 100.0 30 .................................... AGCACGGATTGTATGTGTAGGTAACGCCAT 2445229 36 100.0 30 .................................... CGAGGAATACATGGTGATTGCATTGGAGGA 2445163 36 97.2 30 ..............A..................... TGATCGTCGCGCGGCCGGTCGCATAATCGA 2445097 36 100.0 30 .................................... ATCGCAACGCCTGCTAACATCCAATCGCTC 2445031 36 100.0 30 .................................... GTCACCGCGTTCGTTAAAAACGTCATTTTC 2444965 36 100.0 30 .................................... TCTACTGCTTGCATGTCTATAGTCCTCCTT 2444899 36 100.0 30 .................................... AAAACAGCCGCGACACATTTAGTATCGCGG 2444833 36 100.0 30 .................................... AGTCTGGTTTGTACAGCACATTGTTAAAGT 2444767 36 100.0 30 .................................... CCGTTGGCTTGGCTGGTTTAGACTTGTAAC 2444701 36 100.0 30 .................................... AACTCGGTGCAACATTCAACCGAATCCAGA 2444635 36 100.0 30 .................................... CCGTTGGTTTGGCTGGTTTAGACTTGTAAC 2444569 36 100.0 30 .................................... GCTTCCTCACGTAATCGCTTGGTCACGTTG 2444503 36 100.0 30 .................................... ATATCGTCATGGTCAATGCTGTACTCACCG 2444437 36 100.0 30 .................................... AAATACAGCCGTGTCAGTACCGCCAGTGAT 2444371 36 100.0 30 .................................... CGTCATGCCCAAGCAGTGGACCTTCTTGCC 2444305 36 100.0 30 .................................... GTTCAGGCGTGCCGCAATTTTTCCCTGTGA 2444239 36 100.0 30 .................................... TGATCCGGCTTGGCTGGCACTTACTGAGCA 2444173 36 100.0 30 .................................... AGTGCCTTAGCGTCAGAGCCGTGTCAGTAC 2444107 36 100.0 30 .................................... TAGACCTGATGACCTATGCGCTAAACAAAC 2444041 36 100.0 30 .................................... TGTCGGCATCGGCTTGAACACACACGATCA 2443975 36 100.0 30 .................................... TAACTTAGAAAAGGCACCGACGGCGTATGG 2443909 36 100.0 30 .................................... AGTGCCATAGCAGCCTCGTAGCCGTGTCAG 2443843 36 100.0 30 .................................... AGGAACGGCGAGAGATCGACAAGCTACGTA 2443777 36 100.0 30 .................................... CAGCCGTCTTCTGGCTGACCGAAATGGCCG 2443711 36 100.0 30 .................................... TGTTGTCTATCTGCATTGTTTAGCTTCCTT 2443645 36 97.2 30 ..............A..................... ATGGCAGCGGAGCTGAGGATACTCCTCGCA 2443579 36 100.0 30 .................................... AAAATGGCTGACGCGTGACGGATCGCGAGA 2443513 36 100.0 30 .................................... GCTATGCCCGCGCCGGTATTGCAACCGGCC 2443447 36 100.0 30 .................................... CTAATATATCAGTGCATGAGCATTTTATTT 2443381 36 100.0 30 .................................... CGCGTAACTGGATCGGGTTGTTTTAATTCG 2443315 36 100.0 30 .................................... CGTGTGGATTGTGCTCACCTATCCGGACAG 2443249 36 100.0 30 .................................... GATCGTAGGTCGAAGTGCGTGCTTCTATCC 2443183 36 100.0 30 .................................... GAGGTGAGCATATGCTACCGGAGCGACTCA 2443117 36 100.0 30 .................................... TGATTTTCTGCGCTTGTAAAAAACGTTCCA 2443051 36 100.0 30 .................................... AGGTCCAACGCCTCCCCCGGCTTCCCGTCC 2442985 36 100.0 30 .................................... GCCCATTGTGGCTCACGCGACTGTGACGTA 2442919 36 100.0 30 .................................... AGCGCATTGCGAGCTGTCGAGAGGCCATCG 2442853 36 100.0 30 .................................... AGGACACATAATGGGGCTGGTGGCTCGCCC 2442787 36 100.0 30 .................................... AGCATCAACGGTATCAGTGGGACGAGAAAA 2442721 36 100.0 30 .................................... TGTTCATGTCTATTGGGGATCGTCCGGATC 2442655 36 100.0 30 .................................... CGTTCTGAGGTGGTATGAACTATTAGACCG 2442589 36 100.0 30 .................................... GGTCCCGCCGTGCTGATAGCCATCTTGGTA 2442523 36 100.0 30 .................................... AATGCAGCCCGGCAGCAGCATCGTAGCCGT 2442457 36 94.4 0 .......................G.........G.. | ========== ====== ====== ====== ==================================== ============================== ================== 64 36 99.8 30 GTCCCATTTTAGCCGATTCTGGAAGGATCCAATAGC # Left flank : TTGACGATTCCTTTCAGACCGTACGCAATGCGATTCATTTAACGATTGAAAGTATTGGTGCAGCCTTTACCCAGGAAAAAATTTCTGGCGTCACTCTCCCTCAAGTGATTCCATTAGCCCCCATGGATTCTCCTAGGTTCATGCGAGTAATTGTAATGTTTGACCTACCGGTTGTCGCGAACGAGGATCGAAAGGCAGCAAATCGGTTCCGTCATGACCTAATTAGCGAGGGATTCGTCATGATGCAGTGTTCAGTCTACTACCGGATCGTCAATGGCTTAGACATGGCAGCCAAGTATGAAAAACGACTTGAGGGTTACCTGCCAGAAAAGGGGCAAGTCCGCTCTCTAGTTTTGACGGAAAAACAATTTGCACATATGAAGGTGCTAGTTGGAGACGTCAGTCCACAAGAATCAGATGTCACCGGCAATTCACTGACCAGTTTATAGACACGAAAAGAGGACGCAAACCGCGAGGTTGCGCCCTCTTTTCTCTGACCT # Right flank : TATTGCTCTGCTGATTTTGAGAATGATTAACGTTGGCGATGAGTGCGGGCAAGGAGCAGCGAGATGACTGCTTGTGCCGCACAGAAAAAGTGGCAGCCGGATCAGCGCGCACGGAAATTTTCGAGGGTCGAAATTTTGCGGCGAGATTTTCGAAATGAAAACGACAAAATTTATTTTCAGAAAGAGTAAATTAATTGCAAGAAACTGATATGCCAGATTTCTGTGACGGTTGCTGCTACTTGCGATGTATCTGATCCAATGACGCCCATGGCACACCATAATTTGCAACGTTGATATTTTCTTGCAAAATTCGGTTTGCTTCCGCGTTGCTTTTCTGCTTTTCTGGTGTATTGTTTTCATAATACAAACATTGCGTAACAAACAACAAAAAAACAACCGTGGCTGTAATCGCAATACCTGCCAGCATATAATCATTCATCCAAATCACTCTTTTCCTAGACGCACGGGCACGCCCTGTATTATTTCAATACTGTATTTCA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCATTTTAGCCGATTCTGGAAGGATCCAATAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.70,-3.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //