Array 1 34328-31720 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSGK01000059.1 Vibrio cholerae strain N2750 NODE_155, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 34327 28 100.0 32 ............................ TTCTTAGCTTGCTTCTCCCACGTGGTCAGCTT 34267 28 100.0 32 ............................ TCCAGCATCTCCCGCCGAGCTTGTTTATATTC 34207 28 100.0 32 ............................ GAAAGCCCTTCGGTAGCGAAAGGAAAGACTCT 34147 28 100.0 32 ............................ TCAATCGAGGGGTTTTTGTTATGTGACTAATT 34087 28 100.0 32 ............................ ATTATATATCAACGCTTTAAGCCACTTTTTGT 34027 28 100.0 32 ............................ ATTTTAATTTCTTGCTTGTCGGTCAATCCCAA 33967 28 100.0 32 ............................ TCTCGGTCGCTCGGTAAATCCCAAGCGCCTAC 33907 28 100.0 32 ............................ TTTTTCATTGTGCTTAGGTAGGCAAAGGAAGT 33847 28 100.0 32 ............................ TTTACGGCGCGTATCGACGCGGAGGACTGGCA 33787 28 100.0 32 ............................ TCTTCCCACTGGATTCTCATTACTTCTTTTTT 33727 28 100.0 32 ............................ TTTCGGGCATTGGGTTGAGCACATCTCAACTT 33667 28 100.0 32 ............................ TGCATTCGGCACAGTTCTAGCGTTGTCATGCC 33607 28 100.0 32 ............................ TCTGTATCGACTAGAGCGACTTTAAGCGCGGG 33547 28 100.0 32 ............................ ACATAACGGCGTAACATTGATTCGCGCAAAAG 33487 28 100.0 32 ............................ TAAAAGCAGAAGAAATGGGGCGTTTGGGTGAC 33427 28 100.0 32 ............................ TCAAATGTTCCATCAGGCTTTTCGATGCTGGA 33367 28 100.0 32 ............................ GTTACTTGGCGAACCATTACCAGCTACGCGCT 33307 28 100.0 32 ............................ TGAAGCTCTTTTTCACTTCGCTGTGCAAATAA 33247 28 100.0 32 ............................ TCAATACAGCGCATTAGCTAGCCTCCGATACT 33187 28 100.0 32 ............................ TATCAGCTAGCACTTAACCGCGCTGAAACTGC 33127 28 100.0 32 ............................ GTAATGGCTTTGCCAATCCGGCCTTTATTTTG 33067 28 100.0 32 ............................ TTTCAGGCTGTTGCGGGTAAACAGGCGCTCAT 33007 28 100.0 32 ............................ TCTGTCTTCATTGTTATTCTCATGGCAACTTT 32947 28 100.0 32 ............................ TGAAAGCTAGAAAGCGGAAGAGGCGCGCCCAG 32887 28 100.0 32 ............................ TCAGTTTGACGGAGAAGCCAAATGAATAACGA 32827 28 100.0 32 ............................ TTTGGTTCGTTCCGCACGATAGCGAAACTTAA 32767 28 100.0 32 ............................ TGCTTGCTACTTATCGAGCAAAAACAGGTCTG 32707 28 100.0 32 ............................ TCACATGAGGCTTATTTCGTTCAGCTTATGAT 32647 28 100.0 32 ............................ TTAATTCGATAGATCAACTCATCAGGGTTAAT 32587 28 100.0 32 ............................ TGAAATAAATTTAATTGACCTCTTTTATAGTC 32527 28 100.0 32 ............................ TTTCTTAGTGTCTAACTCGACTACTGACGGCG 32467 28 100.0 32 ............................ TTGAGGTGATGAAGTCTAGAAAGTCAGCGACT 32407 28 100.0 32 ............................ TAAAAATAGAGCAGCAAAAATAAACCAAACAA 32347 28 100.0 32 ............................ TTTCACAAAAAGCAAAGCAATATGGAAATCAA 32287 28 100.0 32 ............................ ACAAGGGTATCTATTGCCGAGATCGCAAAGTG 32227 28 100.0 32 ............................ TGAAAGTAATCGTCTAATCGGCTATTTAACAT 32167 28 100.0 32 ............................ TGTCTGCAAATTATCTTTTGCAAGCTGCAGGC 32107 28 100.0 32 ............................ TATTAAATATCGAGCGCATCAATGATGATATG 32047 28 100.0 32 ............................ TCTTTTTGAGAATTTTTCTTATTTAACTCTTC 31987 28 100.0 32 ............................ TGTTACATCGAGCACTGGTAAACTTTTGGCAA 31927 28 100.0 32 ............................ AATCACCCGGATGGAATCGGCAATCGCGTCCA 31867 28 100.0 32 ............................ TAGCATTAAGTGAATTGTTGGAGTGCCCACGC 31807 28 96.4 32 ...........T................ TTGAAAGCGCATACGGTAAGACAGTGTTTGCT 31747 28 92.9 0 .........................TT. | ========== ====== ====== ====== ============================ ================================ ================== 44 28 99.8 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : AGCGCATTGCATGATTTGCAGGGGTTAAATTGGTTAGGACCTTTGGCAGGATATTGCAAGATTACTACGGTTACTCATGTGCCAGACCAAGTGGAATATCGCATCATTTCAGTTAAACGCAGTAATTTAAGCAAAGCAAAATTAGCGCGTTTAATTGCTAGAGGTAGCATAGATAAAGATGGTGAGAAACGTTACAAAGTAAAAATGCTTCGCCAAGGGTTTGATAATCCATACCTTGATCTGTCTAGCAGTTCAACAGGGCAGGTGTACCGAAAATTCTTTGAGTTTAGTGATATTCAAGCTGAGCCAGTTGATGGTGAGTTTGATAGTTATGGTCTAAGCAAAACAGCAACTGTACCTTGGTTTTAACCCTTTATTTTTACTCTTTAAAAATGTGCTTTTAAAACAAATGGTTGCAACGGGTTGTTTTTAACAAGGTAAAAAGATGATTTTTACCCTAACAGCTTGTTGCAGCTTATTTTTATCGGTTTATTCTATTG # Right flank : GAAAGTAAATCAAACGAGGCAGTTCACTTTCTAGATTACGTTAAGGTTCTTACGTTCTGCTACGTATATTTATTAGGGTTTTCTTAAATGGTCTTTTCCCAAGCATTAGTGACAAATTTCCGAGGTGTAATGATTAAGATAGCCCAGTTGATGAGTATCAGTTGAGGGGTAGTCACCATGAGCATCGTTGGTTGTGTTAATATCAAATCCAAGCATATCGATCGAACATGTCAGATGGTCTCGTAAGCCAAGTTTTACTCAGGGCGAGTTTTGCGTCAATAAAAATCCTTTTAGAATCATAACGTAATGAGCTATTGGATTACATCAGCTTCCATGTCTTAAGTGGAGGTTATATTCTAGATTATTTTCAATTGCCGAGTACCAGTCACAGATAGGCTACCTTTGGCGGCCTCTTCTATATGTCCGCTCCACCAGCTCATCATTGGCTTTCTGCGTTCTAAGTAGTCAGTGCGGTTATAGGCGCTACGCACTTGGTTGTC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //