Array 1 10383-9934 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABXOQ010000038.1 Photobacterium damselae subsp. damselae strain 82dy-OG8 Contig_000038, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 10382 28 100.0 32 ............................ CGGATTTAAGCGACACGGCAATAATGAGCTTT 10322 28 100.0 32 ............................ TTACGAGGAACCATTCCCCGTTTCGATGAGAT 10262 28 100.0 32 ............................ GAACTGCTGTGACGTAATAAGCGCTTTAGAAC 10202 28 100.0 32 ............................ ACATTATTCGGATGCTGATTATAAAGAAGTAT 10142 28 100.0 32 ............................ GAGAAAATAATTATGATGTTATTTGAAAATGA 10082 28 100.0 32 ............................ ACACCTCGCGATACTTATCAGCGTCACACTCG 10022 28 100.0 32 ............................ TGTACGTCGTTTTCTAGCAGTCACCGTAACGT 9962 28 82.1 0 ...........CA........C..CT.. | A [9940] ========== ====== ====== ====== ============================ ================================ ================== 8 28 97.8 32 CTTCACTGCCGAGTAGGCAGCTTAGAAA # Left flank : | # Right flank : GTAAACTTTGGAGCTAACCTTTGCTTTTGGTATCCTTAGTGCTTATCGCTAAGATCATTAGCAAAAGTATAAACATAGGTACTACATGCTCACAATCTCAAACAATGTGACGATTTCCGATTGGGAGATTGAACTTAACGCTATTCGCTCTGCGGGAAATGGTGGGCAAAACGTCAATAAAGTAGCCACAGCAATTCATCTTAGATTTGATATTAAGAAATCATCACTGCCAGCTATTTACAAAGAAAAATTACTTAAGCTATCAGACAGTCGAATTTCTTCTGATGGTGTGATCATCATTAAATCGCAGCAATACCGAACCCAACTGCAAAACAAAGAAGCTGCTCTTGAGCGATTAAAAGAATTGATTTTATCTGCGATGGTTGTACAAAAAGCCCGTCGTCCAACAAAGCCAACCAAAAGCTCCCAGCGTCGTCGTTTAGAGTCAAAAACCAAAAGGGGAACGACTAAAACGATGAGAAAGAAGGTTGATTATTAAC # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGAGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTTCACTGCCGAGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 71791-72538 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABXOQ010000089.1 Photobacterium damselae subsp. damselae strain 82dy-OG8 Contig_000089, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 71791 28 100.0 32 ............................ GTGCTCGTGAAATCACTGAGTTCCACGTATAC 71851 28 100.0 32 ............................ AGTTCGTTGCTCGATTTAATTACTCTATTAAT 71911 28 96.4 32 ........A................... TAAATCAAAAACCTCTTAGAATCGCTTACAGG 71971 28 100.0 32 ............................ TAGACCTAGCCCAAAGGATTGAAATTGTCAAG 72031 28 100.0 32 ............................ ATCGACAATGCAAGGCGTTGGATCTCTGTACA 72091 28 100.0 32 ............................ TGTTGCCGCTCAAAACCCGCTATCTTTAAATC 72151 28 100.0 32 ............................ CATCGATTCTATGATTAATAGCGCCAATCTGT 72211 28 100.0 32 ............................ AAGGGCTCACAGGAATGCGTACTAGTGTCAGG 72271 28 100.0 32 ............................ TCATCCAGCAGCAAGGACGCTGCGCCAAAATT 72331 28 96.4 32 ...T........................ CGCTGCAGCGTAAAACGGTGATTAATGCAATT 72391 28 96.4 32 ...T........................ AGTTAAACGTAAACGGCCCCACATTACTTGCA 72451 28 96.4 32 .................T.......... CAAGCAAAACGAAGAGATACACCCGCAATACG 72511 28 96.4 0 ............A............... | ========== ====== ====== ====== ============================ ================================ ================== 13 28 98.6 32 CTTCACTGCCGAGTAGGCAGCTTAGAAA # Left flank : GCTTCATCAGTGTTTGTGACAGTGTGGCATATCTTATTGGTTGGCAAAAATTGGTTTTAAAATGGTATTACCGAAAGAGTCAGAATTTGGCGGTTGATTTCCCTGAAACAGGGTACAAATGGAATCAGTTGGGTCTATTAGCACAAAGCTTTTATGTAGAATATCGTGATTGGACTTATTCAGAACTGCTTTCTGAGTTTGAAAGTAATATGGAACAGATTCTTGTTATTGTCGCATCATTATCTAATCATCAACTCTATCAAGAACCATGGTACGAAAAATGGACGTTAGGGCGAATGATTCAGTTTAATACCTCATCGCCAATGAAAAATGTCAGAACTAAGGTACGAAGATTTAAAAGAGGGATGTGACCCTATTTTTTGACTTATTTATAAGTTATTGATTTATAAATATGTAAAATAGGACGCAGAAAAAAGGGTATTTTAGAATAAAGTGGTCTAAGTTCTTTAAAAATAAACCGAAATAGAATAAAGTCTTCA # Right flank : ATGCAGGCAGAAATTCGCAATGGTTTGAACTTTCTTCACTACCGAATAGGTAGATAAAACTTAGACATATTTTACTCTTTAATCTGATATTTCGTCATTCTTGCCAATAAAGTCGCATTTTAAATTCATCCTGTTGAATATACTAATGCCATGATAGTTAACGCATTGATATGATGTTAAAGATGAAAAAGGACTTTTCTCCTAGCGAGCTTAAAACCATACTCCACTCAAAACGTGCCAATCTTTATTATCTTCAGCATTGTCGAGTGTTAGTAAACAGTGGGCGAGTTGAATATGTTACTGATGAGGGTAAAGAGAGTTTATATTGGAATATCCCCATCGCCAATACGACCGCCATTATGCTTGGAACGGGTACATCGGTGACTCAAGCTGCTATGCGAGAGTTGGCTAAAGCTGGTGTATTAGTCGGTTTTTGTGGTGGCGGTGGTACTCCGCTTTTTTCAGGTAATGAAGTTCAAGTGGATGTCTCTTGGCTTTTA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGAGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTCACTGCCGAGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 81008-81155 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABXOQ010000089.1 Photobacterium damselae subsp. damselae strain 82dy-OG8 Contig_000089, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 81008 28 100.0 32 ............................ TAATTCACAACCGAATTCTAATTTTATAACAG 81068 28 100.0 32 ............................ GACAGAGATTACATCAAAAGTTGATGCGTACA 81128 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 3 28 100.0 32 CTTCACTGCCGAGTAGGCAGCTTAGAAA # Left flank : GATGAACTAATGGCTTTACCTTGGTTGAAAGGTTTGCGTGATTACACCAAAGTTAGTGCAATCTTACCAATACCTCGTGATATTGCAGGGTATCGCACTGTGCATCGCGTGCAAAAAAAGAGTCCTCATAATTTGCGTAAGCGTGCGGTAGCAAAAGGCCGAATGACTGAACAAGAGGCTCTGACGAAAATCCCTGATGCGTTACAAGAACGATTAGCTTTACCTTTTATTCAGATGCAGAGTTTGTCGAATAAGCAGGTAATGCGTGTTTATGTTGCGCTAGGAGAGATTCAATCAGAACCTGTTTTTGGTGAGTTTTCTAGCTATGGTATGAGCCGCACGTCGACCATTCCTTGGTTTTAATCTGTAGACCCTTTTTTTAAGCTTATACTTAACTTATTGATTTATAAATAAGATTGTAATAGGTGAGAAAAAAGGGTTTTTTATTGGAAAATGACTTAAGCTCTTTAAAAATAAACCGAAATCGAATAAAGTCTCCA # Right flank : | # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGAGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTCACTGCCGAGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //