Array 1 3207-3417 **** Predicted by CRISPRDetect 2.4 *** >NZ_WKJY01000380.1 Streptomyces clavuligerus strain NCIMB 14335 NODE_380_length_7158_cov_23.3739, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3207 28 92.9 33 ....C........A.............. GTCCTCGCGCCGAAGGCGGGGAAGTGGGACGCC 3268 28 100.0 33 ............................ GAGGGTGCGCAGGCGCTGGGCGGCTGCGCGGAG 3329 28 100.0 33 ............................ AAAGAAGGGCCCCTCATCTCCGCCCCCTCTCGG 3390 28 96.4 0 ......T..................... | ========== ====== ====== ====== ============================ ================================= ================== 4 28 97.3 33 GAACGACCCCCGCGCGGGCGGGGCGGAT # Left flank : CCGGTCGACGTCCCCGTTCCGCGTGAGGTACGACGCCGTGTTCTGCGGCGTGGTCCGGGCGTGCAGGGCATGGACGGCCCCGTCCCACGAGTATCTAGCGGCATCGCCGACCCAGGCGAGTACCGTGTCCTCCCCCTCCTCCAGCACGGCCAGGACGGCGGCCCCGGTCGGCTGCCCCGGGTCTGCGACCTGGCGCCCGGCGGCCGTCAGACCCGCGCGGGCGCCGTACAGGGCGCCGTATCGCACGGCGGTCCGCGCGCACAGCAGCCCGACCGTCGGCGCACCGGGCTCGTGCCCGGAGATATCGACAACACACAACCACCCCTCCGGCCGCCGGCCAGAAGACGGAGCGGCTGCCGGCACTGTTCCGTGGGTTGGTGCCCTGACGGCTGACCGCGACGACGATGACGGCCGTGGTGGTCATGGTCTCCCCTGGCGCCGGTGTGACCGCCGACCGTAGCCAGGGAGGTGTATGCACTCGACCCACAGTGTCATCGCGA # Right flank : TACTTCGTGACCTGGGGTGTTGTCACGTGATCATGCTGTTTTCATTTACCTGCATCCGGCTGGGGCTCCGTCGGTCCGGTGCTCTGTTGGCCCGGGGCTGGGGTGGGGTTCAACGGTATCGGGCGGTGTGGTTGTTGTGGGGTGTCTGGTCGCCTTCCGGTGTCTGGAAGGCGACTTGCCCCGGCTCGGGGTGTGATGGAGTCGGCTGGGTCCGCTGTTGGTCCAGTGGGGCGGTGTCTGGGTGGGGATGCCTGCGTGGTGGTCTTCGAGGATGGCGTCGAGGACATGGTTTGTGGTGGTTCCGTAGAGGGCGACCGCTTGGTCGTGGCCTGCGTGGCGGGCGTAGGCGCGGACGAGTGCCGGGTCGGCCTCGGCATCGGCGCGTACGGTCGCCCGGTCCCACAGGTCCTCGGGCGCTCCTCGGCCATGGGGTTTTCGACGAGGGTGGGTCCGGCAGTCTGGTTCCCGCGGGCGGTGAATGCTGCTCGGGCGGCCTGGAA # Questionable array : NO Score: 2.72 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAACGACCCCCGCGCGGGCGGGGCGGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.20,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.68 Confidence: LOW] # Array family : NA // Array 1 73-221 **** Predicted by CRISPRDetect 2.4 *** >NZ_WKJY01000510.1 Streptomyces clavuligerus strain NCIMB 14335 NODE_510_length_5654_cov_35.3935, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ================================== ================== 73 27 92.6 34 ....A..............A....... TCACGAGAATCGCCGCGATGGTGCCGGCCTGCAG 134 27 96.3 34 ........................A.. CGGGGCGGCGGTCCTTGTAGGTGACGCCCTTGCC 195 27 100.0 0 ........................... | ========== ====== ====== ====== =========================== ================================== ================== 3 27 96.3 34 GGACGACCCCCGCGCGGGCGGGGCGGA # Left flank : GACCGCAACCGCGTACGCCACCCGCTACCGCAAGCGCCCCTCCACCTCCTGACCCACCCACACCAACACAACG # Right flank : ATCCGTTCCAGCCATTCCGAAATCACCTGGTTGGTTTCTTCTGGCATTTCCTCCTGGATCCAGTGACCGCAGTCCAGGCCGACCACTTCCACGTTGGGCACGAACTCTGCCAGTCTTTCGAATCTCGGGATCGCGAAGTCCTGGTCGCCGTAGATCATGAGGGCGGGCTGCTTGATGATCGGGTCCGCGTCCGCCAGCTGGTGCCAGTTGCGGTCGAGGTTCCTGTACCAGTTGATGCCGCCCGTGAATCCAGACGTCTCGAACGCGGAGACGTAGACGGCCAGGTCGCTGTCGCTCATGATGGGCTCACCGAGTGGTGTTTCCGCCTCGGCGAGGTTGATAAATGCCATGCCCGGCTCAGGGGGTGCGGGGGGCACGTTCTTCCGGTAAAGGTTGCGGAGGAACTGAGAGGTGTTGGCATCAAATGCGGCGTCCGCGACGCCCGGCTGCCGGTTGAAGTGGACGAAGTAGAAGTCGCCGCCGAGGAAGGTTTCCATGAC # Questionable array : NO Score: 3.98 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGACGACCCCCGCGCGGGCGGGGCGGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,0] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.90,-9.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.68 Confidence: LOW] # Array family : NA // Array 2 4890-4676 **** Predicted by CRISPRDetect 2.4 *** >NZ_WKJY01000510.1 Streptomyces clavuligerus strain NCIMB 14335 NODE_510_length_5654_cov_35.3935, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 4889 29 89.7 32 .C.......................C..A CCTCAGCAGGCATGAGCACGAGGTGTTCATCA 4828 29 100.0 34 ............................. TGGCGCCCCCCGGCGACGGTAAAGACGCTGCGGT 4765 29 89.7 32 C..T.................A....... ATCACCGTGGACGGAGCCCCGTTCCCGTGGCT 4704 29 69.0 0 G..T.................TG.AGCTC | ========== ====== ====== ====== ============================= ================================== ================== 4 29 87.1 33 ATCCGCCCCGCCCGCGCGGGGGTCGTTCG # Left flank : GTGCCGAACGTGGATTTCCAGGCCGCCCGAGCAGCATTCACCGCCCGCAGGAACCAGACTGCCGGACCGACCCTGGTCGAGTACCCCACCGTCGACACCGCGCCCGAGGACGTCTGGGACCGGGCGGCCGTACGCGCCGACGCCGAGGCCGACCCGGGCCTCGTCCTCGCCTACGCCCGCCATGCGGGCCACGACCAGGCGGTCGCTCTCTACGGAACCACCGCCACCCGCATCCTCCACGCCGTCCTCGAAGACCACCGCGCGGGCTTCCCCGGCCGGGCACCGCCCCGCTGAACCGGCAGCGGGCCCGGCCGACTCCACCGCAGCCCGAGCCGGGGCAAGTCGCCTTCCGGACACCGGAATCGACCCAGACAACCCCACGACGACCACACCGCCCGATACCGTTGAACCTCAGCCCAGCCCCGGACCAACGGAACACCAGCCGAATGCAGGTAAACGAAAACAGCAAGATCACCTGACAACACCCCAGGTCACGAAGT # Right flank : TGGCTCCAGCGTGCCGGTGACCACATCAGCACGGCTGACCGCAGGACGGCGGCGCCCCGACCAGGCCCACCGGGTCACCGCCAGCACTCCTCCGCCACGACCGCCAGACACAGCAGCACCTCGAACAGCACGGACCCAACCCCGGACAGGCCGAGCGTGAGGCGACCGTGCCGAACCCCGAGTTCCAGGCCGCACGGGCAGCCCTCACCGCCCGCGAAAACCAGAACACTGACCTCGACCTCGTCGAATACCCCACCGTCGACACCGCGCCCGAGGACGCCTGGGACCGGGCGGCCGTGCGCGCCGACGCCGAGACCGACCCTGGCCTCGTCCTCGCCTACGCCCGCCACGCGGGCCACGACCAGGCGGTCGCTCTCTACGGAACCCGAGCCGCTCGCATCCTCCACGCCGCCCTCGAAGACCACCGGGCAGGCATCCCCGGCCAGGCGGGGTTCCACTGAACCGGCAGCGGACCCGGCCGACTCCACCGCAGCCCGAGC # Questionable array : NO Score: 3.40 # Score Detail : 1:0, 2:3, 3:0, 4:0.35, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCCGCCCCGCCCGCGCGGGGGTCGTTCG # Alternate repeat : TCTGCCCCGCCCGCGCGGGG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [1,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCGCCCCGCCCGCGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.77 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 3670-3459 **** Predicted by CRISPRDetect 2.4 *** >NZ_WKJY01000751.1 Streptomyces clavuligerus strain NCIMB 14335 NODE_751_length_3751_cov_12.0425, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3669 28 85.7 33 ..............T.T.......G..T GTCGTGCTCGGGCTCGCTCACCGGGTCTCCTTG 3608 28 100.0 33 ............................ CGAACCCCGGTGTCTCGACGGTTGCCTGGAGCA 3547 28 100.0 33 ............................ ATCCCCAGACAGATCCGCTCGGACTCGCCCAGC 3486 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 4 28 96.4 33 GAGCGACCCCCGCGCGGGCGGGGCAGAC # Left flank : CACCTCCACCAGTCGTGGGGGTGCCCGATGACCGCGGCCCGCCCGCCGCCCGCCGTAGCTCTTTGAACGGCACGGGACACG # Right flank : ACTTCGTGACCTGCGGCGTTGTCAGGTGATCATGCTGTTTTCGTTTACCTGCATTCGCGGCTGGTCCTTGTGTGGTGCGGTCTGGGTAGGTGCACGGTATCTGCCGGAGTGACCGTCGCGGGGGGTGTCTCTATGTCCTTCGTCAAGGATGTGGTGCCGGGTGTATAGGTGTTTGTGGTGGTTATGCGGCGAGGGCGGCGGTGGGGGTTCGGGACTCGTAGAAGGTTCCGTCGCGGAGCATGGCGAACAGGACGCTGACGCGCTGGCGGGCGAGGCGGAGGAGTGCCTGTGTGGTGCTCCTGCTTCTGGTGCGGGCCGGGTGGAGTGGTTTCGTGGTGAGTGTGAGCCGTACGCGGCCTGGAAGGCCCGTACGCCCGTACTGCTGCAGGTCTGCCGGTCGTGTCCTGCGCGGGCGGCGTGCTGCGGGCTCGCGCTGCGGGACCTGGAGGGGATGGACCTGAACCGGGGTGAGGACGACATGGTCCGCGGCGGTCTGCTGG # Questionable array : NO Score: 2.68 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGCGACCCCCGCGCGGGCGGGGCAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,0.74 Confidence: LOW] # Array family : NA // Array 1 1229-1501 **** Predicted by CRISPRDetect 2.4 *** >NZ_WKJY01000873.1 Streptomyces clavuligerus strain NCIMB 14335 NODE_873_length_3209_cov_20.0406, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1229 29 96.6 32 ............................G TCGTTTTCGGTTCCTTGCTGGCTTCCCTTGCC 1290 29 96.6 32 ............................A GAAGGGCCTCTTCGCTATCGCCCTGTTGCTGT 1351 29 100.0 32 ............................. CCTCCGGGACTGACAAGGGACCCGGGACCCTC 1412 29 93.1 31 .....................G.....G. GTCCTCTTTGGAGCGGCCTGGCTGGCCGCGT C [1437] 1473 29 89.7 0 ........T.....T......G....... | ========== ====== ====== ====== ============================= ================================ ================== 5 29 95.2 32 ATCCGCCCCGCCCGCGCGGGGATCGTCCC # Left flank : GGACACAGGTGTTCCTTTCACGAGGTAGGGCCTGTGATCGCGCCGCCCGGAGGGTCAGAGTTTCGGGCGGCGCACCTCCATGTTCAGGGGCATCCTGCAGTCCCACACCCACCACCAACACGACCCCCGTACAGGCGAGTTGATGACGGATGGGCAGCACAGGAGCACAGTCAGAAGCACGGACGGTGCGGGTGAGTACGACTGTCCCCGTGGCTCTCGGGGGCAGCAGCCGACCCTGGAGCACGGCGGCCGACGGCCGGGCCGCGGGCGTTCACACCGAGGCGGCGCAGGGACCTGTTCAGAACCCGGTACAGGGCATGCCAGGCCCAGCCAGACATCCGGAGATCCGTGCACGGGCGGCTTCCTTCCGGAACACCCCCCGCACTGGTCATGCCGACGGATACCGTGCACCTACCCAGACTGGACGACACAAAGGCCGGCCCGGAATGCAGGTAAACGAAAACAGCATGATCACCTGACAACACCCCAGGTCACGAAGT # Right flank : CCGGGGTCGCCATGTCGGTCTGGACCTTCGCCCTGTCTGCCCGCGCCCGCGCGGGGCTCCGCTCTGGGTCCAGCGGGTCGGTGACCACATCAAAGCCACCGACCGCGGACGGCGGTGTCCGGATCATCCGCACCGGGAGTCAATGCCGCGGCACTCCTCCGCCACGGCCGCCAGGCGCAGCACCTCAAGGGCCACGGACCCGACCCCGGACAGGCCGAGCGTGAGGCGACGGTGCCGAACCCCGAGTTCCAGGCCGCCCGAGCAACATTCACCGCCCGCGAAAAGCCAGACTGCCGGACTCGATCTTGTCGAGCACCCGACTGTCGAGGAAGCGCCCGAGGACCTGTGGGACCGGGCGGCCGTACGCGCCGACGCCCACGCCGATCCGGCACTCGTCCGCAGCTGCGCGCAGCTCGCCGGGCACGACCAGGCCGTCGCCCTCTGCGGAACCACCGCCACCCGCATCCTCCACGCCGCCCTCGAAGACCACCGGGCAGACA # Questionable array : NO Score: 3.83 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:-1.5, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCCGCCCCGCCCGCGCGGGGATCGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCGCCCCGCCCGCGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 253-103 **** Predicted by CRISPRDetect 2.4 *** >NZ_WKJY01000802.1 Streptomyces clavuligerus strain NCIMB 14335 NODE_802_length_3527_cov_38.4153, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 252 28 85.7 33 .AGT..C..................... TCGGGCATCCGTCCTCCTGTGGTGGCTCACCCC 191 28 100.0 33 ............................ CTACGCGTCCGATCCGAAGCAGTCCCCGATGTA 130 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 3 28 95.2 34 GGACGATCCCCGCGCGGGCGGGGCGGAT # Left flank : GTCAGCCCTTGAGCCACCTCCCCAGCTTCCGCGCTGCTCGGACCAGTAGGTCTTCGATGCGCTGCCGCAAGGTCGGTTTGGGCTTTCCGCGACGCCCCATGGGCGCCTCCCCTCAGAACAGTCACCAGTGGTTCCCGGCTGGTGACCTTCTTTTGGGTTCGGGCCGGCCCCGAGGGCGGGGGCCCGGACGCGAATCGTTGAGGGGAGGCGCCACGAAGCGCACCGGTACTCTACCCCCGGCGCCCAGTCGTACGGTCCGTTCCGTCAACTCCCGTACACGAACGTGCTACTTCCGCAGCCCCGGCCCGCCAGGCCGGTGCCGGAACAGACCCCGGGACCGAGCCACTCCCGCTCAGTGAAACCCCGCCCGGGGAAGACGCGAGGTCGTCCTCGAGAGCAACCTGGGTGATGCGTTCGGCGGTGGTTCCGCAGAGAGTGATGGCCGCATCATGTCTGGCGACTCGTGCATGGCTCCGGACGAGAGCCGGATCGCCGCTGCC # Right flank : TACTTCGTGACCTGGGGCGTTGTCACGTGATCATGCTGTTTTCGTTTACCTGCATTCGGCTGGGGCTCCGTTGGTCCGGTGATCTGTTGGCCCGGGGCTGGGC # Questionable array : NO Score: 5.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGACGATCCCCGCGCGGGCGGGGCGGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,0.74 Confidence: LOW] # Array family : NA // Array 1 28-380 **** Predicted by CRISPRDetect 2.4 *** >NZ_WKJY01000093.1 Streptomyces clavuligerus strain NCIMB 14335 NODE_93_length_14649_cov_42.2862, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 28 29 100.0 38 ............................. ACCCAGGCCCTCGGCCTCCACGTCCAGCTCACCCACCG 95 29 100.0 35 ............................. CTTGACGGGCGACGCCATCCCATGGCGTTCACCCT 159 29 100.0 35 ............................. GCGCGCGCTCTCGGCTACCCCGCTGCCCGGATCAC 223 29 100.0 35 ............................. CTCCACGTCTCCGCAGAAGGCGACTGGGCCATCTC 287 29 96.6 36 ..........T.................. CACACTGCGCCAGGACGCTCCCGACTCGGCGTGGGT 352 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 6 29 99.4 36 GTTGCGAACCCACCAGGGCTGATGACGAC # Left flank : GCCCCGGGAAGGGGCGGGGGAGGGGTCG # Right flank : CCCGAGAGTAAAATCGCAGCTCAGAGGCCATCCGCGAGCCTCGCTGGAGGCGGCTTCTGCGGCGACCCGCCGGTACTGCATCCGCCCAGGTCAGATGATGTCCCCCGGCCCCCCGAGGTCCACGCCCAGCGTATCCGTCTCGACCATCTCCGGAGACCGCACGGTATAGGTCCTGATGCTGTCGTACCCCGGATCGATCGCACCGCTGAGCGCGGCCATCAGCGCCCGGTACTGCGCCGCCGACAGCTCGCCCTGGAAGACGCTGCGCTGCGTCCAGTGCAGATACTTCCGGCAGGTCTTCAGCACCCTGGGGTTGCGTTCCACTGCCGTGTCATAGATGAGGATCACGAACACAACCCCTCACCACCACGGCCGGAACGGCTTGTATGGCTGGCCCTCAAGACACAGGCGGACGATCTTCAGGGCCTCCAGGTGGATCAGCTCCTCGTAGCTCACCTTCCGCTTGAGGGAGCGGTGGTAAACGGTCGTCGCCAGCTCCT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGAACCCACCAGGGCTGATGACGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.60,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [6.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA // Array 2 9898-9475 **** Predicted by CRISPRDetect 2.4 *** >NZ_WKJY01000093.1 Streptomyces clavuligerus strain NCIMB 14335 NODE_93_length_14649_cov_42.2862, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 9897 29 100.0 37 ............................. CAAGGCCGACCCGATCGCGGACGAGCTTGACCGGCTG 9831 29 100.0 36 ............................. GCGTCGGCCTCATCGAGCCAGCGTCGGGTCTCCGCC 9766 29 100.0 36 ............................. ATGTGATTGCGTGGGACGGTGACCGTGCCGGTGCGG 9701 29 89.7 37 ..............C..G...G....... ATGACCATGCGGACGGCGGCGACCATGGCGTCGGGGC 9635 29 93.1 36 ..T.C........................ AGTGGCTGGTGACCCGCGTGCAGATGGCTGATCTCA 9570 29 93.1 36 ........T................T... GGCCTGGAGAAGGAAGCAGGGACGGATCGCCTTGCC T [9559] 9504 29 93.1 0 .................G..A........ | C [9490] ========== ====== ====== ====== ============================= ===================================== ================== 7 29 95.6 36 GTCGTCATCAGCCCTGGTGGGTTCGCAAC # Left flank : ATGCCCAATTTCGATGTGATTTTGAAGCGTATGGGACCCCCTGCGCGCCGATAGGACACTGGGAACAGAAGGGACGAGTAGGGCGCAGGCATAACGACTGCACAACACCCGGTACCGGAGACGCCAAAAGCGCTGCGGGAATCGCACCTGCCTGCGATTATCGGTTCGCTTCACCGAACCTCCACATCGTGCCACGGAGGTGAAGCAACCGGGGCAAGGCGTCTGGAGCCCTATCCTTGTCCCCGGCAAGGTCACGGACCCATGGGCTCCGGGCACCATGGCCACACCATCGGCCCCCGTAGCTCAGTGGATAGAGCAGGCGCCTTCTAAGCGCTTGGCCGCAGGTTCGAGTCCTGCCGGGGGCGCACATCGCCCGATCATGTAGACCTCCCCCCGGAGGGCCGCCCGTGACACTTGGCGGGCACCTCTGGCCTCGGCGGGTGCATTACCGTCGGGTCGCTGCGGGAGTGGCTGGCCGAATGCTCCGCGTACGTCATCCC # Right flank : ATCCGTTCGGCCTGACCGGCGACTGCCCAATTCCCCCCTCCGTCAACGCGGACCCGGGATACAGCGACGGAGAGCATCAGGACCGTCTGCGCCCCGCCCCCTGTCAGGCAGGCCGGTGAGGATGATGCAGATTGCGGTGACCCCAGCGCTCACGTTCAACAGCCACGCATCAGACTTAGCCGCTTTCGCGGCAGCCCGGCCATTCACGTACACCACCAAGAGCCCCGCACCGCAAAAAATATGATTACTTCGTCGGCCAAATTTAGCCAGCGCGCATGCGCCGATGCAGCCCATTGATCTCCCCTACGGTCAGCCCCTCTCGGATGGAGTTGTAGTTCAGCTCTTTCCGAGCAAGACCGTTGGCATACGAGCGCCACGAATAATCGACCCGTTCAGCGCAGGGCCACTGGACAGGTGAGGCCGTCGGCCCTCACAGCCGACGGCCTCGCCCTCAACCCAACAGGGCTGATAACGAAAAACCTAACTGCAACTCCACCATT # Questionable array : NO Score: 2.89 # Score Detail : 1:0, 2:0, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCATCAGCCCTGGTGGGTTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.60,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //