Array 1 3108421-3107593 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_KK328412.1 Mycobacterium tuberculosis TKK-01-0085 addxH-supercont1.1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                          	Insertion/Deletion
==========	======	======	======	====================================	=========================================	==================
   3108420	    36	 100.0	    38	....................................	TTAAAACCGTGTTGCACTGCAACCCGGAATTCTTGCAC   	
   3108346	    36	 100.0	    41	....................................	CATAGAGGGTCGCCGGCTCTGGATCACGCTCCCCTAGTCGT	
   3108269	    36	 100.0	    36	....................................	TTTTTGCCTCATGCTTGGGCGACAGCTTTTGACCAA     	
   3108197	    36	 100.0	    34	....................................	TCGCAAGCGCCGTGCTTCCAGTGATCGCCTTCTA       	
   3108127	    36	 100.0	    36	....................................	TTCGTCGACCATCATTGCCATTCCCTCTCCCCACGT     	
   3108055	    36	 100.0	    41	....................................	TTGCGCCAACCCTTTCGGTGTGATGCGGATGGTCGGCTCGG	
   3107978	    36	 100.0	    24	....................................	CTTGAATAACGCGCAGTGAATTTC                 	Deletion [3107919]
   3107918	    36	  94.4	    36	.CG.................................	ATTCGCACGAGTTCCCGTCAGCGTCGTAAATCGCCA     	A [3107914]
   3107845	    36	 100.0	    37	....................................	CCGGCAACAATCGCGCCGGCCCGCGCGGATGACTCCG    	
   3107772	    36	 100.0	    36	....................................	CGCATGGACCCGGGCGAGCTGCAGATGGTCCGGGAG     	
   3107700	    36	 100.0	    36	....................................	TGGATTGCGCTAACTGGCTTGGCGCTGATCCTGGTG     	
   3107628	    36	 100.0	     0	....................................	|                                        	
==========	======	======	======	====================================	=========================================	==================
        12	    36	  99.5	    36	GTCGTCAGACCCAAAACCCCGAGAGGGGACGGAAAC	                                         	       

# Left flank :   TTCAGTACGCCCTCGACTTGCAACTGCAAAGCCTCGTGCGTGTTATCGAAGCCGGGCACCCGTCGCGGCTCGTCGATATCGATATCACCTCCGAGCCATCCGGAGCCTAAATGCCCACTCGCAGCCGTGAGGAGTACTTCAATCTCCCGCTCAAAGTGGACGAGTCCAGCGGCACTATAGGCAAGATGTTCGTCCTCGTAATATACGACATCAGCGACAACCGGCGGCGGGCTTCACTTGCGAAGATCCTGGCCGGGTTTGGCTATCGCGTCCAAGAGTCCGCATTCGAAGCGATGCTGACGAAGGGCCAGCTCGCGAAACTAGTTGCACGTATCGACCGCTTCGCCATCGACTGCGACAACATCCGGATCTATAAGATAAGAGGTGTTGCGGCAGTTACGTTCTACGGAAGGGGACGGCTTGTCAGCGCAGAGGAGTTTGTGTTCTTTTGACATCATCAGCAGGCATTGTTACCACACGCTGGACGAATTGTCCATAGA
# Right flank :  TCCACATCGATTTCCTTGACCTCGCCAGGAGAGAAGATCACGTCGTCAGACCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN

# Questionable array : NO	 Score: 6.19
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGTCAGACCCAAAACCCCGAGAGGGGACGGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [2,12] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-6.40,-7.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [41.7-55.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,1.01   Confidence: HIGH] 

# Array family : NA
//