Array 1 437562-436873 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHAMT010000002.1 Vibrio metschnikovii strain M19C.2 Scaffold2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 437561 28 100.0 32 ............................ ATTAATTTCAGCGACACGTCCATCACCAGCAA 437501 28 100.0 32 ............................ CCGATGCTCCAATCTCCAACGACATCGACCGC 437441 28 100.0 32 ............................ TCGATGCCAAGGTAGTGCTTATCGATTTGCTC 437381 28 100.0 32 ............................ ATAATGGGGATTATCATCAAAATCGCCTTCCT 437321 28 100.0 32 ............................ TATCACTCAAGGAGGAGGCTATCTATCTTCGT 437261 28 100.0 32 ............................ TCATCATAATCAACACCAAAGTCAACTAGGTT 437201 28 100.0 32 ............................ TTGAGATATAAACCTAGATACAGGCTTCTTAT 437141 28 100.0 32 ............................ TCCCCGTCAAAACTAATTACTACCCGTTAGTC 437081 28 100.0 32 ............................ AGTCCAAGAAAGATGCCCCCAACCGATACCGC 437021 28 100.0 33 ............................ ATTACATAAGAGCTTTGCACTGTGCGAATATCC 436960 28 100.0 32 ............................ AGAACGGCCATGTTTCGATTAATGGGGATTGT 436900 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 12 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CGATGTGACTTACGTAAGCTTTGTACGCAAGCAGGTGAAATCGCCCGAGCGAATAGAGCGGGATATGCAGCAAAAAGCGGTATTATGGGCCGCTAAATCTGGTCAATCGCTTGCAAAATGCTTAGCCGAACTTGAACAAAACAAGCCAACAGCATTGTGCCGTTTGCCGTTTATTTACCTATACAGCCAGCAAACGAAGCAGCGCTCTCCTGAAAAAAGCAGTAAGTTCCCGCTGTTTATTCAGATGCAGCAACAAAGCACATCGCAAGACGGGGCCTTCGATTGCTATGGTTTGAGTAGCAAAGCGAATGGACAATCAGCATTGGCAACCGTCCCGTATTTTTAAATTGAACGAAAAAGGGTATTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGCTTTAAATACAATAAGTTACAAAGGGTGGTTTTTTATAAGGTAAAAATGCAATTTTTATCCTAACTAACTGTTGTAACTTATTTTTATTGATTTATTCTATA # Right flank : CGCCGGATTCGATGGAATCAAACTCCCGCCAGTCATCCCCGCGAAGGCGGGGATCCATTCTGCAACAGATGCCAAGTGCTTAAGTGAGCGATCAATTGGCCACAGATTACTGATACTTCGCATAGATTCCCGCCTACGCGGGAATGACGGTTTGGTTGTGGTTTTGGGAGCTGAACTCCATAGATCCCCGTCATGTTTTGCCTGCTACTGCTGTGAGGCAGAAAATGAAGGCGTAGCGATCATCGAAAACTGATCCACTAAATACACTTAGTCAGCATAGACTCCCACCTTGAGGGCAATGATGCTTGACGCTTTGAATACTCGATTGTTCACCTTGATTACAAGAAAGCGTGAGTTGTTTAACAATATGTGCGCCTAATTCCTTAGACACTACGTTGTATGATTGATGTGAGTGGTGGAACACATGAGCTCCCTAACGTTACCTTGCCAGCGAGAGATTGATCTCTCATCAGAGTTAAACGTCGTATTACAAGACAATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [38.3-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 891-262 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHAMT010000022.1 Vibrio metschnikovii strain M19C.2 Scaffold22, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 890 28 100.0 32 ............................ GACCGCATCAACTGTACCGCCGACAATCTCGC 830 28 100.0 32 ............................ ACGTTTGAAGGGCAGTATTTATACGTCAAAGC 770 28 100.0 32 ............................ TATCAAGGGCTTGTGTGCGACATTTTGAGCAC 710 28 100.0 32 ............................ GTTTACGCATTGATGAACATCTTACTTGACCA 650 28 100.0 32 ............................ TCAGAGCGAGTAAAAATCCGAACAAGCTGCGC 590 28 100.0 32 ............................ AAGCATTGCGGAAATCCAATCATTGACAAAAC 530 28 100.0 32 ............................ ACGCTCGATAGCTTCGACACGCTCGATAAGCT 470 28 100.0 32 ............................ CGCTTGCGTTTGCAACGGGTATTTCATTTGGT 410 28 100.0 32 ............................ TCGGAACGTGTCCAAGTAAAATTATCGGCAAC 350 28 100.0 32 ............................ ATTTATGGGGATTGTAAATAGCGCAAAATGGG 290 28 100.0 0 ............................ | A [266] ========== ====== ====== ====== ============================ ================================ ================== 11 28 100.0 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : ATGATTAACAAACATTATCGTTTAATCACATTTGGCAGCTATTTTAATTTGGTTTGCATTAATGGCTTATTTATCTGATATTTATCATTAGAATCAATGGGTAAGCTTAAGTCGATTTAAAAAACAACGGTTTTTCTGTATCAAAAATTAGCTCATTTTAGATTAAGTATTTGATGTTGTTTGCTATTTTATAAGGGTTGCTTGGTGTTTCAGTAGCTATCTGGAACTGAAATATAACAAACAATTCAAGCAGACCCTCAACGCGCGGCATTTTTATTATGCGTTGAGTTTAGTGATTACGGTGTTGTGCGGGAAGTTGCTAGTAGCGTTTCGGGCTACTTAATTGGGCGTTAACTGGCAATAAAATTACCCATCTTTTTTCGTTGAATTTTAAGTCATTGATTTTTATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACTTTTATTAACAATAAGTTACTGATAGAGTTTCATT # Right flank : ATTGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTAAAGAGGGATTCGCAACGCGTAGCATTTTCGTTATGCTTTGATTTTATTAGTTTTCAGTGCAATGCGGTGAGTTGGCAGTTGCGTTGCTCACCCCTTAACGCGGCGTTATGTTTTTTCAGGAAAATTATGATCAGAGAAATTACGAAGTCAGATTTTGAATCATTCTGGCCAACATTTTTAGATGTAATCCAAGCTCAAGAAACTTACGCTTTTGAGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1881-1613 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHAMT010000024.1 Vibrio metschnikovii strain M19C.2 Scaffold24, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1880 28 100.0 32 ............................ AACCGATGCCGCAACTAACGGCGGCTTGAGTC 1820 28 100.0 32 ............................ TAGATTGTGTAGGCGTGCCAAGTGGGTTTTAC 1760 28 100.0 32 ............................ TTAGCTTTCGATTTAGCGTGGTATGCGTAGCT 1700 28 100.0 32 ............................ CCGAAATTAAAAAGCATTTCGAAGCGTCTTTT 1640 28 92.9 0 .............C..........A... | ========== ====== ====== ====== ============================ ================================ ================== 5 28 98.6 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : AAAATTAATGGGAACCAACATCTTGGTACGGAAGCTCGTGAGCTACTTGAGTTAATAGAGTTGTATGGTGAGTCTAACAAATCAATATTGGCTTCAAGTGTTCATGAATTAGTTGATGATAGCGCAAGGTCTGAGGATAGAATCTTTGCAAAACATAGGCTTAAAGGTTTCTTAATGTCTATTAGTGCTAAAGCTGGTGATGTTGCAACTGGTGTTTTACAGTCATTTATCGAAAATCAGATAGGATTATAGAAAAGGCGTATAACAAAGCATTTAAGAGTGATTCGCAACGCTTGGCAGTTTCGCTTCGCTCAAGTATAGCCAAGCGTCGCTCACACCTTAATGCGGCGTTAACTGGCAATGAAATTACCCATCTTTTTTCGTTGAATTTTAAGTTATTGATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACCATTATTAACAATAGGTTACTGCTAAAGTTTCATA # Right flank : ATGGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTCAAGAGGGATTCGCAACGCGTAGCATTTTCGTTATGCGTTGATTTTATTGGTTTTTAGTGTAATGCGGTGAGTTGGTAGTTGCGTTACTCACCCCTTAACGCGGCGTTATGCTTTATTGAACCTCAGCAAAATCAATATATAAATTTTAATGGGAAAACTCAGTCTGATTTAGAAGTTTTTATATTCTAATTTATTGATATTATGAGTTTATTGTTCTTTTTTGTGGCGATTGAAAGTTGAACGATGCTTTTGTGTTTTTGTCGGGTTTTGCTCTGATAAATTGTGTGTGCAAAAGGTTCGATTTTTGCTGAAAGGTCTCTTTCTTTTGTGCTGTTGGCTCGTTGATTCCACAGGCTATTTCGCTTCAGCATGTCTGGGATCTCATTGACATCTTGCTTGCTGAAAGTGTTTGGTGAGCGCAAGTTTATCGATGATTGTGTGCTTTTGTCCGGCTT # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //