Array 1 41267-41474 **** Predicted by CRISPRDetect 2.4 *** >NZ_NCRB01000008.1 Salinivenus iranica strain CB7 scaffold_7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== =================================== ================== 41267 26 100.0 34 .......................... CCCGACCCGCCCAAATACGTAGCCGATGCGATTC 41327 26 100.0 35 .......................... CCCCAGCAGAAGGTAGAGGGTGGTCATGAGGCTGT 41388 26 100.0 35 .......................... CCCGGGTGTGTCCTGGGACAAGTGGGAAACGGTGT 41449 26 96.2 0 .......................T.. | ========== ====== ====== ====== ========================== =================================== ================== 4 26 99.0 35 GGTAGCCCCGCATCCGCGGGGATAGA # Left flank : AGGAGGCCTGCACCTGCGACGGCACGCCGCTCTACCGGCACGTGGCCCGGACGGTGGCCGATTGGGACGACGCCGCGGAAGGGACCGCCGGGCTCGTGGCGGGCGCCACGGCCCCCGAGGCCCTGGCCGAGCTGCGCGAGGATGCGCCCTCGCTGCCCTTCCTCATTCCCGGCGTGGGCGCCCAGGGCGGCAACCCGTCCGCCGTCGTCGATGCGGCCCAGACCGACGACGGCCCCATCCTCGTCAACAGCAGCCGCAGCATCATATACGCGTCCGAGGGCGACGAGTACGCCGACGCGGCGGCGGACGCGGCGAAGGCGCTGCGGAACGCGCTCCGTGCTTAACATCGCATCACCGCCCCGGCCAGCTCTCTTGATTCTCCGGGCGTCAGGCCCGTCGTTGTGAACGCAGAGAGTCTCCCTCCGACAGAATGACGGGACGTGGCGGGTGCCAGTAGCGCTCTCGCCAGCGTCTCGGTGTTCTCTGACATTCTGTAGCAG # Right flank : AAAGCATGAGACGTTATAAAGCATGAAACGGTTGTGTCTACGGAGCAGCACCTCCTGCCGCTCGTCGTCTCGTGCCTATGCCTGGTTCCGGCGCCCCCGTCTACACTACGGACGACACGTCCCCATTTCTTTTCGAGCCCGACCCGAGGGTCGAGGTGCCCGAGGCCCTCGTCCACGACCTCTGGCGCCACCAGCGCTTCGAGACCGAGGACCTCGCCACCACCGAGGGCACCCCGATCACGGTCTTCGACCCGGGACGGCTCAACGAGGACGCCGGCCCCGACTTCGCCAACGCCCACGTCCGCCTCGGCGACATGGACTGGCGCGGCGACATTGAGCTACACACCCGCTCCGGCGGCTGGTTTGAGCACGAGCACCACACCGATCCGCGCTACAACCGGGTCGTCCTGCACGTCACCCTCCGCGCCGACATGTGGACCGGCGGCCTCCTGCGCCCCGACAAATCGCCCCTCCCGGAGCTCGTCCTCGCCCCTCGCCTC # Questionable array : NO Score: 2.81 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTAGCCCCGCATCCGCGGGGATAGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-12.10,-12.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 52630-52052 **** Predicted by CRISPRDetect 2.4 *** >NZ_NCRB01000013.1 Salinivenus iranica strain CB7 scaffold_12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 52629 29 100.0 32 ............................. CGGGCCCGCACAAAGCCCTCGCTGTGGTCCCG 52568 29 100.0 32 ............................. GGCACGCTGCCGTGGCCCGTCGATGGGGTGGG 52507 29 100.0 32 ............................. TATGCGGTGCCGTGGTCCGTATTCTGCAAGAT 52446 29 96.6 32 ............................T CCACTCGCGCGCCCAGTCCATCAGGCGATAGT 52385 29 100.0 32 ............................. AGCCGATGCAACGCGCTCCCTCCCCTTCCTCT 52324 29 100.0 32 ............................. TGGAGACGGACGGCGGAGAGCGCACCCTGATC 52263 29 100.0 32 ............................. GAAGGGCAGGTGGGACAGGGCATCTTCCGCAT 52202 29 100.0 32 ............................. CTGATCGACCGGGTGGCGGGTGCGACTATCTA 52141 29 96.6 32 ............................G GAGGGCACCAGGTAGAGGAGCAAGTACCACCA 52080 29 86.2 0 ......................C...TTG | ========== ====== ====== ====== ============================= ================================ ================== 10 29 97.9 32 GGTGCCCCCGCATCCGCGGGGATAGACCC # Left flank : TCTACGTGGCCCCGACCATGACAACCTCCGTCCGCGAGCGGGTGTGGGCCGTGATGATGGAGTGGGAGGGCCTGCTGCCCGACGACGCCGGCGTGGTCTTCTTCTGGCGGGATCCCGACGCGCCCTCCGGCCTCCAGATCCGCATGCTGGGGTGGCCCAAGAAAGAGTTCATAGAGCACGAGGGCCTGTGGCGCACGCTGCGCGATCTAACGGAAGCCCACAATGTGGAGGAACTGCTGGAGCAGGCGGAGGTGGAGGAAGTATCCATTGACGAGGCGGACCCCACCCTGCCGATGGGAGGCATGGGTGCGGCCTCCTGAGGTCCCCCAATTGTTCATTGACGTTGCGATTTTTCGGAACGCTTTCTATGCTTGGACCGCGACGGGCGACGCAGTCGCGTGCCACAATTTTGATTCGCCCTGTGACAGACTGTCGCTCTTATGGAGCGATACACGGAATGAAGGGCCCGTAGCGCCCGATTCCTGACAAACTGTAGCAGG # Right flank : GGGTCGTTTCAATCGATCGTACAGGAAGACACGGGCGACCCGCAAAACAATGCCCGCCCCGGCGGAAAGCACCGCGGGGCGGGCACAGACATCGGTCGCAGAATGACATTCTAGGAGGGGGCTACTTCTCCCAAATGCCCTCCAGGGTGTAGGGGCTGCCGTCCATGGCCCACACCTCGCCTCGCACGTAGCGTCGGCCCCGTCCGAGCTCACCAATCGCCTCCATGTCGTTGTCGGTCAGCGAAAGGTCGGCCGCGGCCAGGTTTTCCTCAATGTGACTGGGCGTCACGGACTTGGGAATGGTGATGGTGCCGCGGTGCAGGGCCCAGCTGATGAGCACCTGGCCCGGTGTCGCGTCGTGGCGGTCGGCAATCTCGTTGATCGTCGGGTCCTCCAGGAGGAGCGGCTCGTCGTCGCCCTTCATGCCCTCGGGGCGATCCTTGGAGCCGAGCGGCGAATATGCCGTGAGGGGCAGGTCGTGCTCGTTGGCAAAGCTGAGC # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTGCCCCCGCATCCGCGGGGATAGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 1 136034-137329 **** Predicted by CRISPRDetect 2.4 *** >NZ_NCRB01000003.1 Salinivenus iranica strain CB7 scaffold_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ====================================== ================== 136034 38 100.0 36 ...................................... GGTGACGACGAGACGGCCCTTGCCCGGCTGGAGGGC 136108 38 100.0 36 ...................................... GGATGCGACCTCGGGGCTTAAGCGAAACGTCATCTC 136182 38 100.0 37 ...................................... CCGACCCGTCAGCGGAGCAGGTGGCGCTTGCGATGGT 136257 38 100.0 37 ...................................... GTTGTGTCGTAGGTTGTAACCAAGTCCGTGCCCGCGG 136332 38 100.0 37 ...................................... GCCGACCTCATGGTGGGGCTGGGGGCCTTTGCGACGA 136407 38 100.0 35 ...................................... AGGCAGAGACGGGCTCAATGTACGTTCAACCCATT 136480 38 100.0 36 ...................................... TTACGACCAGGATCGAGGTGATCGCAATGCTTGATA 136554 38 100.0 36 ...................................... GTCGTCGAAAACGCGCCGTTTGAGCCGGCCAGCGAG 136628 38 100.0 35 ...................................... ACTGCTTCTCATGCCAAGCGGGAGGGGACGGCGTG 136701 38 100.0 38 ...................................... ATTGCCGCCGTCACGAGGTCCTGCACGATCGCCCGGCG 136777 38 100.0 35 ...................................... TTCAGCATCGAGATGGGCCGGGAGGAGGTGGTCAA 136850 38 100.0 35 ...................................... ACCAGCGTGGCCATCGTCTCGGCCCCGCCAAGCGT 136923 38 100.0 35 ...................................... GCACGGCACTCCGGCAAGCTGGAGCAGATGTGGAC 136996 38 100.0 35 ...................................... TGCGGGTTGAGCGTGACGGACTGAAACGCCCGCTT 137069 38 100.0 35 ...................................... CTGAGTACGGCCCCGAGTTCAAGGCCGGGCTCCAT 137142 38 100.0 38 ...................................... ATTGGCACACCTCCGCGACGTCTGCCGCTTGGATGCGC 137218 38 100.0 36 ...................................... AGCTCGCCGGGCGTTTCGTCTGTCCCTGCCAAAATC 137292 38 100.0 0 ...................................... | ========== ====== ====== ====== ====================================== ====================================== ================== 18 38 100.0 36 GTAGCATCCCCCCTCACCGGGGGGATGAGGATTGAAAG # Left flank : GCCGTCGACTGCGTCACGTGGCCCAGGCCTGCACCAACTACGGTCAACGCGTGCAGCAGTCTGTTTTTGAGTGCACCGTGTCGACGGCCCAATATGAACAGTTGGTCGACGACCTTACGGGCATCATCGAAGAAGAGGAAGACAGCCTACGTCTGTACCGCCTTGCGCAGCCAGCCGACGAGACGATTGAGACGTGGGGCGTGGACGACACGATGGATTTCGAGGATCCGCTGGTTCTGTAGCGCGAGTGCCGAATGATTCTGGGGATCGGTTCTACAAGTGGGCCGTGTGAGGAGCCCGGATTCGTGCGAGTACATGAGAAACGACAACCACAATGAGTGCGAAACCTCGTGGGGGCCTTCGAAATAGTGTAATTAACTGATACACAAAGTGTTGAGGCCAGCAAAAAAGTTTCTAGTATTCGCCTGGTATGGCTGTTGGCCGGGGTCTGCGAAATCGGCCTTGCAAGTCCGTGCTCCACAGAAGATTATGAGGGTACG # Right flank : GTCCCCTTGCCATCCCTGTCGCTGTGCGACAAATCAGTAGTCTCACCCCCCTCGCCGGAATAGTGAACGTGGTGTCGGGGCGGTGCGTTGAGGCGGGGACGGCTCGTTCTTGCGCAATCGGTCCCCGGCCCATGATCCCCGACGGCCTGTTTGAGAAAATCCGACGTCTCGAAGTGCGCACCCGCGGCGTGGTGGAGGACGTATTCGGCGGGGAGTACCGGTCCGCCTTCAAGGGGCGGGGCATTGAGTTTGCCGAGGTGCGCCCCTACCAGGTGGGCGACGACATCCGCACCATCGACTGGAACGTGTCGGCGCGGATGGACGAGACCTACGTGAAGGTCTTTGAGGAGGAGCGCGAGCAGACCGTCATGCTGTGCGTCGACGTGTCCGCCTCCGAGAACTTCGGGTCGGAGGGGGCGCTAAAGCGCGACATGGCCGCCGAAATCTGTGCCGTGATGGCCTTCAGTGCCGTGCTCAACCAGGACAAGGTGGGCCTGCTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGCATCCCCCCTCACCGGGGGGATGAGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-16.00,-16.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [41.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : NA //