Array 1 246302-244242 **** Predicted by CRISPRDetect 2.4 *** >NZ_JGZN01000008.1 Bifidobacterium saguini DSM 23967 Contig08, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 246301 33 100.0 34 ................................. TCGCGAAGCAACCGTTTGATTCGTTTTGAATCAG 246234 33 100.0 35 ................................. ATATCTGGGGACGAGCCCCGGAGCGCACCGGCCTC 246166 33 100.0 33 ................................. TGCATCGAACCGCCGGCGTAGCGGCCTCGGCTT 246100 33 100.0 34 ................................. ACCGATTGCACGCGCTGCTCGGTTTCGCAGACGG 246033 33 100.0 35 ................................. CGGAGGTTGATAATGCTGTTGAACGAGTATTGGGA 245965 33 100.0 35 ................................. ACAGTCTGCACGCGCTGCTCGCGCTCGCAGACGGG 245897 33 100.0 35 ................................. TACATCGACGTGAAAAGCCCGAACGGCAAAAAAGC 245829 33 100.0 33 ................................. TGATGCAGATGTTAGCACGTGCCAATATGTTGG 245763 33 100.0 35 ................................. TATTCGCATTCCCGTGGTGGATACTCGCCATGCAT 245695 33 100.0 36 ................................. ATAGGGCCGGTGAGCTCCGTTTCCGTACCGTCCGCC 245626 33 100.0 35 ................................. TTCAGCGGCGCGGGCAGCTGGCTCGTATCCGCTGG 245558 33 100.0 35 ................................. TCCCGCGCATGCAAGCGGAACGGATCCCCCAGCCG 245490 33 100.0 35 ................................. GACACGGCGAAGAACCTGATCGTCGCGGAACCGTT 245422 33 100.0 34 ................................. CATGCATGAGGCGTTCGACAAGGCCACCAAGGCG 245355 33 100.0 33 ................................. GCCAAAATGGCCAACGGCGTGGAAACCGCATTG 245289 33 100.0 37 ................................. TTCGCCTGGCAGGGGTACGCGCACATCCCCGACGGTC 245219 33 100.0 36 ................................. TCCAACGCGGCAAGCGGCATCGGCAGCGCATTGAAA 245150 33 100.0 35 ................................. ACGTCCTTGGACTCGTCATCGCCGGAGTGCTGCTT 245082 33 100.0 33 ................................. ACCGGACTCTCCGGCGCGCTCGGAAGCCTCGCG 245016 33 100.0 34 ................................. CTATACGCCAGCGGCGTGAAGCCCTCGAAACCGG 244949 33 97.0 33 ......................T.......... CGGTCATCGTGTACCCGCAGGGCGTGTTCCCAA 244883 33 100.0 34 ................................. GCCGGTCGGGTGGATGCTTGGCCAGACGACGCTG 244816 33 100.0 36 ................................. GTCACCCAACCAACCGAGGAAACCGCACACCGAACC 244747 33 100.0 32 ................................. GCCGCAGGCAGTTGCGTCCAGTTGCGGGTCTG 244682 33 100.0 37 ................................. AACGTGCTGTCACCGGTTTCCGCGGCCTTGCCGCCGG 244612 33 100.0 34 ................................. CTGAGGGTACTGCACCATTGCCGAAGAAGCCACG 244545 33 100.0 36 ................................. TGCGGACTCCGCTGGGGCGAGGCCGCAGCATTACGC 244476 33 100.0 35 ................................. ACCGTGCGTGCGGGCCGGTTCGCGGTCAGACTCCG 244408 33 100.0 35 ................................. ATCGGCCTGGCTAATCTGGCCGGCCAATTGCAGGA 244340 33 100.0 33 ................................. ACGCAAGGTGGAATATCCTGCGTGTAGTCAACG 244274 33 93.9 0 ...........TG.................... | ========== ====== ====== ====== ================================= ===================================== ================== 31 33 99.7 35 GTCACCCTCCTCACGGAGGGTGCGGATTGAAAT # Left flank : TGAATGTGCGGTTTCGCCTTCAGGCTATTTGCAGCTTCGTCATGAGCTGAATGACATCATCGACATGGAAAGAGACAGTCTTCGTTTTTATAATCTAGGTGCGAAGTATTCAGATCGTATTGAGAATGTCGGTAAACAGCGGCATCTACCAGTTGATGATGTCATGTTGATATAAGACGGTGCGATATAATGTGCTTCGATTGGATTGGTACCGTCTCTGGGGAAGGGGATGCGCGGTGCCGCGTATGGTGCGATGTGTGAGCTGTCATAAAACTAGTAGAGGTTCGCACCGACGCTGATAAGGAATGAGGATTATTTTTCGGCGATTCGGTAATATTCCAACTTCGTTTGCGGTTTGATAACTAAAAAGTGGTTAGACAACTATCCGATATGTAGGATGCAGCGCGAGTTTAGGGTGTTCTGAAGGATGAATAGTTGATACACTGCAAGTGTCTGTGAACATATTGTCCACAATGTGGGCCGTATATTTCATGGATGCT # Right flank : GATGACGGTGCTGAACGGTTTGGAATAATCCGGTGGTTGATGATGGCGCTGACCAGTAAGGGGTCGTGTTCACCGACCGACATCGCAGGAATCAGGTGCGGTTGGCGATCACCGCCGACAGTCAGGCGCGAAGGCTCTGGGATTCCACGTTGGACTTGGATAATCTGAAGGGTTCGCAGCCGATATGGAAGAACGCGATGCTGAACCTGTTGCAGACATGGTGGCAAGGTGAGCGCCGCAACGGCTCGTTCCGAGACTCACGACAGCGCAGAAGCTCGTCGGAATATCTCAAGCGACGACGGCAGACTGTTTTCGATAACGGGATTGCAGGGCTGCTCCCCGAAGTCAAACCAACAGGGCAAAGTCCGGATATATTGGCGAATAACGTTCAGCCCCAAACGAAGAGGTCGTCAATCACGTCCTGCACGGGGAAGGCGACGGGGAGCGAGGAGGCCGTCTGTATGGTTCGAATATATTAGGCAAGACCGAGTTCCTGCAAG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCCTCCTCACGGAGGGTGCGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCACCCTCCTCACGGAGGGTGCGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.50,-8.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //