Array 1 45826-42475 **** Predicted by CRISPRDetect 2.4 *** >NZ_RZNY01000018.1 Paenibacillus anaericanus strain DSM 15890 Scaffold18, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 45825 33 97.0 33 ................................A TGGGAGACTACAACGGGCAATCAATATGTTTCG 45759 33 97.0 33 ................................A AGGTACGTATATTTAACCCTTTTGCTCATCGCG 45693 33 97.0 34 ................................C TCTCCATTTCCCAGTTGTCATTTACCCACTCTAG 45626 33 97.0 33 ................................A TAATCGCCCCTAGCTCCCCGGCTCTAACTGTCC 45560 33 100.0 34 ................................. TCCTATCCTGCCAGTATGACTTCGCTTCCTAGAT 45493 33 97.0 35 ................................C GATCAGATAATTTATACGTTAGGGATAATACATAA 45425 33 97.0 32 ................................A GCTGGACCCCTTATGCGGTCGTAATTGTCTGA 45360 33 97.0 34 ................................C TGTATGCCGTGAAGCTGGCTTATAAGAAAATGAC 45293 33 97.0 33 ................................A ATTCTATTGAAAGGGGGTTCTTCATCAGATTCG 45227 33 100.0 33 ................................. TTGTGGTAGGTTTGTTTAATGATATCACCTTCG 45161 33 97.0 33 ................................C AAAAACGAACCACTACCCAGTAAGGTATTTCCG 45095 33 97.0 33 ................................G TCCTGATAAAGTTCGACCATATTGTTAGTCGAG 45029 33 97.0 32 ................................A GTAATGAAGTATTGCAAATCATCCTTATGCGC 44964 33 100.0 32 ................................. CAATCTCCTATCTATTGCAAATTTAATCTTTG 44899 33 100.0 34 ................................. CATGAGGAGTGAAATCATATAAAGGATTAGGAAC 44832 33 100.0 35 ................................. TTATCAAGATTATGCAGAAGAATTAGAAGAAGAAA 44764 33 97.0 33 ................................A TCGAAAGACGAAGTGCAAATCGAGCTAGTGTCA 44698 33 97.0 35 ................................G ACACGAATCTCACTTATAGGACAAACCTATCAAAC 44630 33 97.0 33 ................................A ACAACGGGCTACATCTTTTGTAGGAGCCGGGGC 44564 33 100.0 32 ................................. TTTGTAATTACAGTGCCAATCACACCAACTTT 44499 33 97.0 35 ................................A AATAGTACCATCAAGTAAATTACTAGATAGAACCC 44431 33 97.0 34 ................................A CTATTACCATGAACATGTAATTCAGTATAAATAC 44364 33 97.0 33 ................................A AGATTCCGTATGGGATGCGCTGATTGAATTATC 44298 33 97.0 32 ................................C GAAAAAGTTATGAGCGTCTAGGGCTAAGTCCG 44233 33 97.0 34 ................................A TTAGGCAGTGCCGCCAAAGTATCAAACAAATTCA 44166 33 97.0 32 ................................C ACAAGTGGGGGAGTGGTGCTAGATGATGTTAA 44101 33 100.0 33 ................................. ATGGTTCGCAGGCAAAAGCCGCTAAACAATTAG 44035 33 100.0 33 ................................. CCTGCGTATCCCGCTTGCTGTAATGCCAGTGCT 43969 33 97.0 32 ................................C TAGAGTAGCCGAGCGAATTAATAAGTATCAAG 43904 33 100.0 33 ................................. TATAAACCAAAAAGTAATAACCGCTGTAATTGC 43838 33 97.0 35 ................................G GGAAAATCTGGACTTGTCGGTCGGATGAATTCCAA 43770 33 100.0 33 ................................. CTGTCGAAGCTTTTGACCGTGGCGCTGAATATC 43704 33 100.0 33 ................................. TTGCAGGAATAACAGAGGAGGGAAACAACAAGT 43638 33 100.0 31 ................................. ACGCTTCGGCTTAACTGTGCTAATGCGACAA 43574 33 100.0 34 ................................. TATATGCTTTGCTTTGAGCTTTCCAACGTTACGA 43507 33 97.0 36 ................................A TGCAAGCAAGAAAGACCCTCACGACATGATACAGAC 43438 33 97.0 33 ................................A TATCAGCTTGCCTAGAGTCGGAAAAACATAAAA 43372 33 97.0 33 ................................C GGGTTATAGACAACAACCAGGAACATAGTATCC 43306 33 97.0 34 ................................C TACTAACATATCCCCAGCGACCGCCGTTGCGTCA 43239 33 100.0 32 ................................. TTTTAACCAACTCCTTATAAAAACTCATTGGA 43174 33 97.0 34 ................................C GTCATTTCCTTGAAAGGAGATGTTTGGATTTTCC 43107 33 100.0 34 ................................. ATCATGCGTTTCGACAAAATAACCTTCCTTTTTA 43040 33 97.0 33 ................................C AGCATTTCTTATCAATCCGATAATCTCATTTGA 42974 33 97.0 34 ................................C CTTTATCGAGTACCAAGAACATACCGATTAGAAA 42907 33 97.0 32 ................................C ATTACCAGAACGTAAAACACCAGACGATATAA 42842 33 97.0 33 ............T.................... CTAGCACTACTGAAGCAATCGATTGGGAAGCTA 42776 33 100.0 33 ................................. AGTATACTCCATAGAGCAAACCACCCTATTAGT 42710 33 90.9 35 .............A..T...............C GTCCTAAAGGTGAATTAACACGAGCGGAGAGCGCA 42642 33 93.9 34 .........T......................G CATCTCCATACACCACAGCAACACCACGTTTATC 42575 33 90.9 35 ...................TA..........C. TTTCTGTGTGTACAACTCGTGTGTTCGCAGATCTA 42507 33 93.9 0 .............GA.................. | ========== ====== ====== ====== ================================= ==================================== ================== 51 33 97.6 33 GTCGCATCCCTCGCGGATGCGTGGATTGAAATT # Left flank : CACGGTATTTGCGAAATGATCTGGATGAGTACCCTCCATTCCTATGGAAGTAGGTGCAGCTAATGCTGATAATAGTTACATATGATGTAAGTACGATGGATAGTGAAGGGCAGAGAAGATTACGTAATGTATCAAAAATATGTCAGAATCACGGTCAACGCGTCCAAAACTCCGTGTTTGAATGTATTGTTGATTCGACCCAATTCGCTGTATTAAAAATGAAGCTTGAAGATGTAATTGACCAGAATCAGGACAGTCTTAGATTCTATCAACTTGGCAACAATTACAGAAACAAAGTTGAGCACATTGGCATTAAAGCCTCCCTTGATTTGGAAGGGCCTTTAATTTTGTAGTGCGAATCCAAAGCGAACATGAATTTCCCGGGACATTCGCACCGAGAAAACCATGCAATACATCCAAATAAAGAAAAAAATGTATAATTTAAATGATGTTTTGGTTAGGGAAGGCTGATTTCTAGGTTAAATTACTAGAAAATCGGA # Right flank : CCTATATAGCCGCTCCTTTAGGGAGGCGGTATTTTTTTGACTCTCTTTACTCGACATCGATCCATGTTACGAATGCGTCACATCCCTTGTTGAGTCGTGGATTCTCTTATTTTATTTTGGGATATTATAACAAAAAGGGCATTAATTCGGCTACGGACACTAATTTTTTTCGTTATTTTGACCGATAAGTTATAAGTAGTTTATTTTTTCTGAAATTCATAATAGAGACAGAGAGACAGAGGCATCTTGCCAAAAGGAGAAGAGACTATGTTTAAACGGGTAGAGAACGAACTGGAGATGGCGATGTTTAACGGCGTTTGGACTACCGTGTGGTTGGAAAAAGGCTATGACCTGGAGTTCTCAGAGCGGATTCTCGAAAGATACGTAGTCGTTACCAAAGAAGGGCATTACGTCGGAACGACGGAGATCAAGCCGTTTAGCAGCGGCAGTTCCATTAACGAGACTGCGGCCTTTGATCAGCATCCGGCTGTTATGCAGGC # Questionable array : NO Score: 5.55 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCTCGCGGATGCGTGGATTGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCCTCGCGGGTGCGTGGATTGAAATA with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.60,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 57993-54374 **** Predicted by CRISPRDetect 2.4 *** >NZ_RZNY01000018.1 Paenibacillus anaericanus strain DSM 15890 Scaffold18, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 57992 32 100.0 34 ................................ TTAAAAGCAACACAGCTTACAAGTTCATAGAACT 57926 32 100.0 36 ................................ TAGCAATCGTTATTGTAGGGTTGTTCATCGTCAAAC 57858 32 100.0 34 ................................ TTTTAACTCTGGAATCATTGTTTTCCCTCCCTAA 57792 32 100.0 34 ................................ TCTGAGGTATTAGTTACACCTAAAAAGATATCAC 57726 32 100.0 35 ................................ AAACATAGCCTTGCTGATCTTGAATGACTCTACTA 57659 32 100.0 33 ................................ TCTCAAACATTAACTTCGCTTTGGCTTCCTTAC 57594 32 100.0 36 ................................ TTAATAACGAGTTGATCCTTTATAGCCTGTGTCTCA 57526 32 100.0 34 ................................ ACGTTCTCCACCTTGGCTAGTAAATGGTCTATCT 57460 32 100.0 34 ................................ GTCCAGTTAGGTGAGCTCTCTCTGTGGCGTTCCT 57394 32 100.0 35 ................................ TGACCTCGTCAGTAGGGGCTTTACCCCTAGACCGC 57327 32 100.0 35 ................................ TTAGTTGTTGATGGTCACGAAACAGACGTACACTA 57260 32 100.0 35 ................................ TTAGTTGTTGATGGTCACGAAACAGACGTACACTA 57193 32 100.0 35 ................................ TTAGTTGTTGATGGTCACGAAACAGACGTACACTA 57126 32 100.0 35 ................................ CCTAACAGTAAACGACAAATAGTTGCCCGGCTCCA 57059 32 100.0 35 ................................ ATTTCTTTTGCCTTTTCGTCTTTATTAAGGATATC 56992 32 100.0 34 ................................ CGAAACCCGAAGAGTTTATAGTGAATTTGTTTGA 56926 32 100.0 34 ................................ TTTATCCATAATTTCAATAACTTCATTTTCAATT 56860 32 100.0 34 ................................ TTGTAGTTGTCCCTGTATCTGCTATTGTAACATC 56794 32 100.0 34 ................................ AAAATCCATAAGCTCCCCAGACACCGGATAAGGC 56728 32 100.0 35 ................................ TGTATCTCGTATAAATTCTCTGAGGTATTCGTTAC 56661 32 100.0 34 ................................ TTTAGATGTACACCAAAATCTTTTGATTACAGTT 56595 32 100.0 35 ................................ CGACAGAAGACGCCACTATGACACCAAGTAAAAAT 56528 32 100.0 33 ................................ CATTAGATCAGATCAAACGATTATCTAGCGGCA 56463 32 100.0 34 ................................ TCCCCTATAAGGGTTAATCATTCAAACCTCCGTT 56397 32 100.0 34 ................................ CCTGTGGTTAACAATGATGATCCAGACCGTATTC 56331 32 100.0 34 ................................ ATCTTAGCAATCATCGAATTCATTGCGTTTAGGT 56265 32 100.0 34 ................................ CTCCTTTTCCTCCGGTTCCGAGTTCGATTTCGAC 56199 32 100.0 36 ................................ CGGTTAGTAATACAAATACTCCTCAATCAGTTGAAC 56131 32 100.0 33 ................................ TTTGCGCATCTTGGGAATATTCCTGTACTCATA 56066 32 100.0 34 ................................ ACCTAGTACTAATATAACTCCAATTAAATATGGT 56000 32 100.0 33 ................................ TGTCCTCCGTTGTCGGTAACATAAAGGTTATAC 55935 32 100.0 36 ................................ CTCCAATTCTTATGAACGGTTTTATTCACAGTGATG 55867 32 100.0 35 ................................ CAAATTGGATATAAAGGGCTTATCACTTTAGCCTT 55800 32 100.0 34 ................................ TATCCAGAGTTAGCATTGGTAGATTGGAATCTAA 55734 32 100.0 34 ................................ CAACATTAAAGATATTGAGCAGTAGGACGAAACT 55668 32 100.0 34 ................................ TAACAAAAGTGTCCCCATACTGTGTCGTAATCCA 55602 32 100.0 35 ................................ ATATCCCATGGCTTGTCCATCCTTTCAGGTAGGTA 55535 32 100.0 33 ................................ TGTACTCAGTATCGATAGACCGAGTACATCATC 55470 32 100.0 34 ................................ ATTTTCATATTTCCGAGAAGATCGGCTGTACGTT 55404 32 96.9 35 ......A......................... GATTTGGTTCATGACGGCGTTTATTGCGATCAAAA 55337 32 100.0 35 ................................ CGTAAATCGTGCATATCTCCTTGGGCTTGCGTCAA 55270 32 100.0 34 ................................ ACCATTGAACGTTGATCCCGCTTGATTAATTACA 55204 32 100.0 33 ................................ AAAATTAAAAGAACGTCATAATGAAAGTTTAAA 55139 32 100.0 34 ................................ TTTTTGTTTGCGATTATGCGACATGGATGTACGA 55073 32 100.0 35 ................................ ATCCATTACGTTTACTGGTATGGCATGCAGCTGTG 55006 32 100.0 35 ................................ CCTGTACGCCGTGTAATATCGTTTATGGCCTCGAT 54939 32 100.0 36 ................................ TAGTGGTCGTCCTCATACCGATACTTCGGGTTTGGG 54871 32 100.0 34 ................................ AGAAGTAGACACTTCCAATATCGGTCCCCAATCG 54805 32 100.0 34 ................................ TTTGATGAGTTGCTTTTCCTCGGTTGTATGCATT 54739 32 100.0 35 ................................ GGTCTCCTTATTGCGCTCATCGGCGCGTGGTTTAT 54672 32 100.0 33 ................................ AGGAATGAGTGAGAACACCGAGAACTTAAATTT 54607 32 100.0 36 ................................ ATGAGATCCGATGTCACAGAAAGCACGTCATGATAT 54539 32 96.9 34 ..........G..................... AAACATATCGCAAGCGCTATAGTCTGATTTAATG 54473 32 100.0 36 ................................ GCTAGGTGATTTGGTCAAATCGGGGGCCTGTCGGAC 54405 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 55 32 99.9 34 GTCACATCCCACGTGGATGTGTGGATTGAAAT # Left flank : ATATACTTGGGAGATCCGTTGGCAGTGGGTTCGATGGATAAATACGTATGTTTATATATGTGAATTAGTGATCAACAAGCCAAGTGCTTGTTGGTTTATTTATTCTTCCATGTTAAAATTTGGAGGTAAAGATGATTTATTGCTGTCGAATGTTGAGAATATAGAATGATGACTACAATGAACTCGAGGTATCGCAGATGAAACAAGAATTGTAAGAACAGATCATTAATAATATAACGAGACTGCCTTTGGGGACTCAGGGTTTAGGTAAACCAATAAGACTTCTACATCGTTGTCGAATAAAATTAGTAAAAAACAAAGCTATTTATACGGTGCGAATGTAAAGCGCACATAAAATTCCAGGGAGATTCGCACCGATAAATTACCTTATAATAGAAATTTAAATCTCCAAAAGAGGATAATCGAAAAAAATCAGGCAAATTAAACCAATCTATACACTCGAAATGCGAATATTAGTTCATTTTTGCTTAAAATTCGCT # Right flank : TCCAAGTTAGTGACCATGTTTTAGCAGTGCCAGGTCACATCAAGGACAAACAACTGAGATATCAGTCACATTCCTCGTTGACGCGTTAATAAATGTACAATAGGGATCATGAAATGATTATAAGCGGGAAGATAAAAGCAAGTTCAGGTTGTCCGAAGGATAATGAAGTTCTGACAAATGGATCATTATGTAAAATGTAGGTCGAACTAATGGTTCGGCTTATTTGTATTTTTACAAGATATTACCTTAATTTATTTAGATCCTTAGTATCGCTTAAATCAGCTAATAGTTAGTAACCACGGAGATTAATAATCTTAATCACGCTTTGATAAATGCTACGAAGAGGCAATATCCTAGAATCACCAATTTTATAAATATTTTGGAAGGTGATTCATTAAGTATGTCGAATCATGTTTATAACTAGGGTAAAAATATGTCGCAGGGGGAAAGTGAAATGAATTATGTGGCTCATATTCGTGAGAGCGATCATCAGTACCAGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACATCCCACGTGGATGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.90,-6.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA //