Array 1 594480-598229 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACDXW010000001.1 Pusillimonas sp. CC-YST705 contig01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 594480 28 100.0 32 ............................ TCAGGCAACTTTCTTGCGCCCGATCTGGGTGA 594540 28 100.0 32 ............................ CCCTCATCAAGCGTCTGTTTCTTTTTCTTATC 594600 28 100.0 32 ............................ GAACAGGCGATCATAGAGCTGGGCGCCAGGTA 594660 28 100.0 32 ............................ ACCAGCAACTAGGTCACTGGATGGGAGGAAAG 594720 28 100.0 32 ............................ TTTAGGGGGTATGAGCCCTTCGCAAAAAGCCG 594780 28 100.0 33 ............................ CAGCGCATTACCTCTGGATAGGTCATGCGAGAT 594841 28 100.0 32 ............................ AGACGAACATCAATAAAATGAGCAGTGCCCTG 594901 28 100.0 32 ............................ TGCTGAGCAACGGATGGCAAGCGATGCGCTCG 594961 28 100.0 32 ............................ AGGGGTGTGCGTATTGGCGGCTAGATCCCCGC 595021 28 100.0 32 ............................ CTCGCAAGTTAGTGATGAGCGCCAATCATCGT 595081 28 100.0 32 ............................ GCCCAGCGCACCGCCTCGGCTTTCGTTGAGAA 595141 28 100.0 32 ............................ GTCGCCGAAGTCGTCACCGAAAGGGTCGTCTG 595201 28 100.0 32 ............................ TATGCGGCAGTGCAATGAGCATACCACTAAGC 595261 28 100.0 32 ............................ AGAAACTTTGCTGGCGTGGGCAAGGCCGGCAC 595321 28 100.0 32 ............................ GTATTCGCTGGTTGGATCTGGATGAGCATCGC 595381 28 100.0 32 ............................ TTGGCCAAGTCGGCGTTTAGCGCACGCACTCG 595441 28 100.0 32 ............................ AGCATCAGGATTGACCAACGCCCAGGTTGGCG 595501 28 100.0 32 ............................ ACTTGTGATACGAGGGCGTGGCGTAGCGGTAG 595561 28 100.0 32 ............................ CCATTCATGAAGCAGGCTGGCGGCTGGCTGAG 595621 28 100.0 32 ............................ AGGCCCGACTGAAGACCGTCACGCCGTCCACC 595681 28 100.0 32 ............................ CGTTGCCCAATTCGCCGCTGCATCGAATGCGC 595741 28 100.0 32 ............................ TCGAAAAGGTCGAGTTATCCGGGGATCCCGGC 595801 28 100.0 32 ............................ CTTCCGGCAAAATTTAACCATTGGGGCAGCGC 595861 28 100.0 32 ............................ AGACAAGTCCGCATACTCTGGTGTTGGGTCGC 595921 28 100.0 32 ............................ GCCGGCATCGGGCTGGAGACGCGCCGCGATTT 595981 28 100.0 32 ............................ CGCTCTTGCGATTGTTGCGGTGATCACCCTAA 596041 28 100.0 32 ............................ ACTCCGAACGGTAACCACCGGCGGCCATCATG 596101 28 100.0 32 ............................ CCTTGGCTGGCCTCTGGAAATGGGTTTGCTCC 596161 28 100.0 32 ............................ TAGAGCTCGTGACTCTAGGCGATTTCTAACCT 596221 28 100.0 32 ............................ TGTGGGAGTTCAAGACGCTGGTCGATGACTAC 596281 28 100.0 32 ............................ AGTCGCCCACCGCTTCGCCATCGATTGCGCGC 596341 28 100.0 32 ............................ GAAGCCCGACCATATCGAGCGCCACCTCGAAA 596401 28 100.0 32 ............................ ATGTCCGTCTGCATCAACTAAAGGTGGCAGGA 596461 28 100.0 32 ............................ TATCCGCCCACCAATCCAGATCAAACGAAGTG 596521 28 100.0 32 ............................ TTGCGTGACCCCACCAGCGCCTACCGCTTCTA 596581 28 100.0 32 ............................ AATATCGCCGGAACCGACTACTCGGCTTCCGT 596641 28 100.0 32 ............................ CCCATGTACCGTTATCAATAACGTCCAGCGCA 596701 28 100.0 32 ............................ AGGTGCCTGTTTTAGGCACGGAGTCGATGCCG 596761 28 100.0 32 ............................ TCTGCAAATTACATTATCAGTTCGTTTGTTTC 596821 28 100.0 32 ............................ GGTCGCTAGAGATACGCGTAAACGGGCAGCCG 596881 28 100.0 32 ............................ CGGTGGTATTCGCGACAGAAGGAACATTTAAG 596941 28 100.0 32 ............................ TTGGCGGGGGCTTGTCATCGCCCCTGACCAGC 597001 28 100.0 32 ............................ TTCGTCTTTCTGGCGGGCATGGGGTTTTGACA 597061 28 100.0 32 ............................ AAAAAGAGCGATTGACATGTCTGGCCAGGTCA 597121 28 100.0 32 ............................ ACGAAGAAAAAGACGCCGTGTGGGAGCGAATC 597181 28 100.0 32 ............................ GCCGTCGCTGCAACGGCCCCGCAAGTAATGGC 597241 28 100.0 32 ............................ GCAACCCAAGCTGGCCTGCTGGCACGATCCTG 597301 28 100.0 32 ............................ ACGAAATCGCTAGGGAGTTAGGTGATGTCAAA 597361 28 100.0 32 ............................ CGGTATCCCACGAGTAACCGCGCAGGCCCAGG 597421 28 100.0 32 ............................ TGCTGCGGTTGTTTCAATAGCCGCGCCACCTG 597481 28 100.0 32 ............................ TGCCGCTCAGTGTGCAAAAGCCAGAACGCATT 597541 28 100.0 32 ............................ AACCCTAAGCCAACCGGACGAGGACGGGGGCG 597601 28 100.0 33 ............................ CCGCTGGCAATTCTTGGTCGTAATACTCATAAG 597662 28 100.0 32 ............................ GGATCAAGGGTTGGTGCAGTATTGGGGTTATC 597722 28 100.0 32 ............................ AGCGGCTCCGCTAATAACTTGGCCTTGGTCGT 597782 28 100.0 32 ............................ TGCTTGACGACACAAAGAACGGCGAGCCTCGC 597842 28 100.0 32 ............................ GACTTGGTTAACCTGTTTGGCACCATGTCAAA 597902 28 100.0 32 ............................ CTGGAAAAACGAGGTCATGACGTAATCACCCT 597962 28 100.0 32 ............................ TGAAGGTGAGGATGCGCGACGCAAGCAAGATG 598022 28 100.0 32 ............................ GCCATGCGGCGCGCTCATTACGCTTCTCTTCA 598082 28 100.0 32 ............................ CGGAAGATTGGCGCCCACCTACATCGTGGGAA 598142 28 100.0 32 ............................ TGGAAGCACTTTCCGCGATGCGGCCTTGAAGT 598202 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 63 28 100.0 32 CTTCACTGCCGTATAGGCAGCTCAGAAA # Left flank : ACCCGTCTGCATCAGTTAATGGCGGCGAACTGGCTAACAGGCATGGCTGACCATGTCGAAGCAACGGACATACTAATCGTGCCTCACGGCACTCTGCATCGAACCGTAAGGCGTGTGCAAGCACAAAGCAGTGCCGATCGAATCAGGAGGCGTCAGATCAAGCGCCATAACTGGACGGAAGACGAGGCGCGCGCACGGATCCCTGACACAGTAGAACAACGCCTGAAACTTCCTTGGTTGACTTTACGCAGCCTTAGCACTGGACAAAACTTCCGCCTCTTCGTCGAACACTTACCGTGTCAACCAGAAGCCATAGCAGGACGATTCAACGCTTATGGACTAAGCACTACAGCCACCGTACCCTGGTTTTGACCCTTTTTTATGGGCTTTTAAAAAATCATTAAAAATCAATAGATTAAAATGGAAGCATAAAAAACGGTTTTTTTGCATCTTTTGCCGGAGCGCTTTGTATTAAAAGCGTTTTCCGGCGTATTTTTGCA # Right flank : AGTTGTGCGGGCCGCCGTCGATGCCGTCAAGCTCATCATCTGTTCGCACGCCCTTTTCCCTTTTCTTTACCTGCGCCGACAGCCGCCGCGAAGATCAAACTCACCCGACAGAAGCCGTATCCCTTCTGATGCTTTTCTGCCATACAGCCGAATACAGCAGGTTGTTAAATAACCCTTTAAGGGTTAAAATTGCCTCTATAGAAAAGAACAAACCCCACTACTCGCTCGCGGTCATGCAGACAGCAATTGCAGCAGTCGGACGCCACGCCTTTACGCTGACCGCCATCAATGGCGGTCGGGCAATGGGGCTAACCGACAGCGATATGCTGGCCGTCATAGCTAGTCTGGGTAGGAAGGATTTCTACAAATCCATGACCACGCATAACGATCATAGGGTGTGGCAAGACGTGTATCACGCCACATGCCCCAATGGTCGTATCGCCTATATCAAACTTACCGAAGTTGCCGAGCGTATCGTCATTCAGTTCAAGGAAAAGTGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGTATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTCACTGCCGTATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [60.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //