Array 1 15732-17389 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHXCH010000011.1 Prevotella histicola strain SCHI0028.S.4 Contig_11_pilon, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 15732 47 93.6 30 A........C............A........................ AATGGAAGATTACGGAAAATCTTACCTTCT 15809 47 100.0 30 ............................................... GCATATCCTTGGCTCTCTTGATACTGTTCC 15886 47 100.0 30 ............................................... TTTGCTCCAGCCTATACAATTAGCCACCAC 15963 47 100.0 30 ............................................... AATTTGCAAAAAGATACACAAGGGTTATTA 16040 47 100.0 29 ............................................... ATATGAATGAAATAAATTTGATAGCAAAC 16116 47 100.0 30 ............................................... AGCCATTGCGAGACAACTCCCTGATACCCA 16193 47 100.0 30 ............................................... CAAATGAAATATAACGACATAAGTAGCTGA 16270 47 100.0 30 ............................................... CTCCGAACTCGCAACAGAGGAAGTATTTAT 16347 47 100.0 29 ............................................... ATTTAATTATTAAATACGAAGCAAATATA 16423 47 100.0 30 ............................................... TCCGTCAGTTCCTTCATACCCGTATAGCCA 16500 47 100.0 29 ............................................... CTCCATTCACCTTGAAGTAGACCACTTTG 16576 47 100.0 30 ............................................... CTTGACAAAAGTAACTATCAGGGTATATTG 16653 47 100.0 30 ............................................... TGCTGCATGATGATATAGTTGCCTGATGTA 16730 47 100.0 29 ............................................... AGTACTAACTGCAGAAGAGATACCTTGTG 16806 47 100.0 30 ............................................... GTAGCACGTACGAGCATATTAAGCGAAGCA 16883 47 100.0 30 ............................................... TTGCTTATCATAATGGACAAGCATGTCTTG 16960 47 100.0 29 ............................................... ATGCAGAAGAAAATGGAGCAGAGAGGGCA 17036 47 100.0 29 ............................................... GCGTGTAGAAGATTTCACGCCCGAAGATT 17112 47 100.0 30 ............................................... AGTATGACAACGCAAACCGTTACACGTATT 17189 47 100.0 30 ............................................... ACATTTGAAGAAACTGCAAATACAGAATTA 17266 47 100.0 30 ............................................... CCTCAACGGGCACAGGAGGAACGAATCTAG 17343 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 22 47 99.7 30 GTTGTGATTTGCTTTAAAATTAGTATCTTTGCATTATCAGACACAAC # Left flank : TAGCAATAACAATAATTATATATAGTAGAACAAATCTACCACTACGTAAAAGAAGAAAAGGGGGATAAGAAAAATATAAAAAAATAAGGCCGCTAAAGAACGACCTTGGGCGGTACACGATCTTTCGACCCTGTCCCTAAACCATATTACTATGATCTGATGCAAAGGTATATAATTAATATTAAACTCCAAAATCTAAATCTCTTTTTAAAGTTAATTAGCATTAAAAAGCCCGTTGTGATTCGCTTGAAAATACGTACCCTTGTGGTAGCAATAACAATAATTATATATAGTAGAACAAATCTACCACTACGTAAAAAAAAGAAAGGGGGATAAGAAAAACATAAAAAAGTGGGACGCTTAGAGCGCCCCTTGATGGTACACGATCTTTCGACCCTGTCCCTAAACCATATTCTTATGATCTAATGCAAAGGTATATAATTAATTTTATACTTCAAAATATAAATCTCTTTTTTAAATTAATTAGTATTAAAAAGCCC # Right flank : CTCAAGTAGCGTAAGAAGGTGGTTATCAACACTGTAACACCTACTTTGAGAAAAGAAAAAATGCAAGTAAAAATAAAGTTCCACCATTAGAAGTGGAACTTTATTTATTTCTAAAACAGCTCTAATTGGACTCCAGGAGCATTTGGCTTATGCGGTTTCTTGCCATAAAAAAGTTTAATTTCTTCAAACTGTTTATCAGTTATACTCATTATTCCAACTTTCCCATACACAGGAATAATGGTTGACACCCTCTTAATATGCACTTCCATGTTTTCTTTACTACCACAATGGCGTATGTAAATAGAGAACTGGAACATTGTAAATCCGTCTTTTAGCAAGTTCTGACGAAAGAGTGCAGCAGCCTTTCTCTCCTTCTTTGTATCTGTGGGTAAGTCAAAAAACACCATTAACCACATACTCCTATATTGACTAAATCTATAAGTTTCCACTGAAGGGGATTATAAATCAGGATACAATATTCTTCTTTGCTCACCATTAAA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTAAAATTAGTATCTTTGCATTATCAGACACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.40,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA //