Array 1 28609-24925 **** Predicted by CRISPRDetect 2.4 *** >NZ_FXPI01000007.1 Klebsiella pneumoniae subsp. pneumoniae strain 3189STDY5864864, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 28608 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 28549 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 28488 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 28427 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 28366 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 28305 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 28244 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 28183 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 28122 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 28061 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 28000 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 27939 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 27878 29 96.6 32 A............................ GGCCTGAACCAGAGCATGATCTACACCTGGAA 27817 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 27756 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 27695 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 27634 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 27573 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 27512 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 27451 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 27390 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 27329 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 27268 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 27207 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 27146 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 27085 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 27024 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 26963 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 26902 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 26841 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 26780 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 26719 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 26658 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 26597 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 26536 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 26475 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 26414 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 26353 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 26292 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 26231 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 26170 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 26109 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 26048 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 25987 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 25926 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 25865 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 25804 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 25743 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 25682 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 25621 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 25560 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 25499 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 25438 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 25377 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 25316 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 25255 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 25194 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 25133 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 25072 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 25011 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 24953 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 61 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //