Array 1 332298-334669 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKZW01000002.1 Dictyobacter vulcani strain W12 sequence2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================================================================================================================================================================= ================== 332298 36 100.0 38 .................................... CGGATGAAGTATCCAGGGAACCTAGTGGGAATTTTGGG 332372 36 100.0 37 .................................... CGTCTGACCGTTGCCGGTCAGGTCCAAAGTTGCGAAC 332445 36 100.0 37 .................................... CAGTAATGGCTAATGGTAGTAGTAGGCATACTCCAGT 332518 36 100.0 37 .................................... CTATAAATCATGCCTTTCGTCGGCAGAAAGGAAATTG 332591 36 100.0 37 .................................... CTAGCACGCCCCCTGCGAAACCTCCATACCGTGCGAA 332664 36 100.0 38 .................................... CGCCCAACGATTAACCATCGTTGGAATTTACTTACGTC 332738 36 100.0 37 .................................... CACACCAACCACACCACCTTCACCACCACCTTCACCG 332811 36 100.0 37 .................................... CTAGCAATATAATGATCACCTCTATTGCCACTACCCC 332884 36 100.0 37 .................................... CAACACTGAATGCGACGATCACGATTGCACAAGCAAC 332957 36 100.0 36 .................................... CAGCATTACAGCACTGAAAAAGGGTTATGAGACTCT 333029 36 100.0 38 .................................... CTAATCTGACATGTTTCATTCTCCTTTATTTTTAAACA 333103 36 100.0 39 .................................... CTTGTATCACAGTGAAACGGGCGGTAAGTTTCCTGTTTC 333178 36 91.7 185 .............................GG..C.. CTAAATCATTGATAGAGCCATAGAAATGATGAATTTGGCATGGAGTAATGATCGTTTACATCAACAATAGAATGCTTTCTTGCTTATGTTGAATGAAATGCTCAGAAAAGTTCATGACTGTGAGGAGATTGAAACAGTAATGGCTAATGGGTAAGTAGTCAGTATTAGGCATACTCCCAGTGGGC G [333209] 333400 36 86.1 39 ..............AA.CG..............G.. ACTATAAAATCATTGCCTTTCGTCGCAAGGAAGGAAATT GG,CA,T [333408,333414,333424] 333480 36 94.4 45 ................................TG.. ACTAGGGCACGCCCCCTGCGAAAACTCCTCCCAACCGTGCGGGAA A,GG,C,T,G [333484,333489,333493,333501,333507] 333567 36 88.9 49 ......TG.......................G.G.. ACGCCCCAAACGATTACCATTTTCGTTGGGAAATTTTACTTTACGTCTG T,A,T,GG,C [333573,333580,333586,333592,333596] 333658 36 91.7 67 CTT................................. CCACACCAAAACCCACACCACCTTCACCCCACCCAACTGGCTTCCTATCCATATCACAGCATATGCA AC,A,T [333665,333669,333678] 333765 34 83.3 41 .................-........-...A.TTG. ATACGGAGAATATCTGCAGGTAACCTAAGTGAATTGGGGGG T [333779] 333841 35 97.2 101 .................-.................. CGTCTGACCGTTGCGTCAGTCCAAAGTGCGAACGGCTAAACGACCACGCTCTCGACAGAATTGAAACAGTAATGGCTAATGGTAGTATAGGCATACTCCAG 333977 36 97.2 38 T................................... CTATAAATCATGCCTTTCGTCGGCAGAAAAGGAAATTG 334051 36 91.7 33 ...............................GA..C TAGCACGCCCCCTGGAACCTCCATACCGTCGAA 334120 36 100.0 37 .................................... CGCCCAACGATTAACCCATGGTCGGAATACTTACGTC A [334145] 334194 36 91.7 36 ...............................GA..C ACACCAACCACACCACCTTCACCACCACCTTCACCG 334266 36 100.0 37 .................................... CTAGCAATATAATGATCACCTCTATTGCCACTACCCC 334339 36 100.0 37 .................................... CAACACTGAATGCGACGATCACGATTGCACAAGCAAC 334412 36 100.0 36 .................................... CAGCATTACAGCACTGAAAAAGGGTTATGAGACTCT 334484 36 100.0 38 .................................... CTAATCTGACATGTTTCATTCTCCTTTATTTTTAAACA 334558 36 100.0 39 .................................... CTTGTATCACAGTGAAACGGGCGGTAAGTTTCCTGTTTC 334633 36 91.7 0 .............................GG..C.. | G [334661] ========== ====== ====== ====== ==================================== ========================================================================================================================================================================================= ================== 29 36 96.7 47 GGCTAAACGACCAACGCTTCTCGACAGAGATTGAAA # Left flank : CTGGGCCAGAACGCATGCCAGGCTTGCGCAACTGTATAGGGACCGCGCGTCGCACGCTGAACAGGCTGAAGAGCGCCCTGGCTGGCTGGAAAAGGCTCTGCAAAGTATCGACCAGGCACTGCCACTTTTCCGTGGACATGCGCCCGTTTCCTATACCCAGGCCCAACACATGCGTGGAGAAGTAATAGCAGCACGAGAAGAGACGCTTCGTTCACCCTTTTGAGCTTGCTTACCTGTCTTCGTTCTCTTTTTCAGCGAGCATATCCTGTCTGGAATCCAGCCCTCAAGGTGTTGTTACTTTTTCGAAAAGCTCATCAATTTCCGAGAGGTGCCAATGCTGCCGCCGCTGAGCTGAGCCTCTCGGAAGGCTCCACAAGCCCATCGAGCACCAAAAAGGGCTGAACGTGCTTCCTGTTTGGCCCCCAAAATAAGCTCTTTTTCCGACCCTCTCGGAAATGCTTGCTTCAACTGGCTTCCTATGCTATACTACGAGCATAGCA # Right flank : ACTAAATCATTGATAGAGCCATAGAAATGATGAATTTGGCATGGAGTAATGATCGTTTACATCAACAATAGAATGCTTTCTTGCTTATGTTGAATGAAATGCTCAGAAAAGTTCTGTGAGGAATGGGGCTATCCAAAAGAAGAAAGGGAGGGGAGGCGAGTCAAAGCTAAAAGGGAGTCTATTTCTGGCAAGTGATGATGAATTTTGATAAATGAATTACTTGCGCCAGTATAAATAGAAAAATCTCTACAAACATAGTCGTAAATCAGAGAATAAATCTATTTGTGATTTAGTTGCACCCCTCTCGACAGAGATTGAAACAATCATTGTATACTCTTTTTATTTCTAAAAAAATCAAGGGCTAAACGACCAACGCTTCTCGACAGAGATTGAAACCCCTCGGACTTTTCGCTCTTGCACCGCTAACGGGAATGGCTAAACGACCAACGCTTCTCGACAGAGATTGAAACCACTCCTCTCCGCTCAGCATCGATAAGCTG # Questionable array : NO Score: 5.32 # Score Detail : 1:0, 2:0, 3:3, 4:0.84, 5:0, 6:0.25, 7:-0.77, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTAAACGACCAACGCTTCTCGACAGAGATTGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.90,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : NA // Array 2 335028-335654 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKZW01000002.1 Dictyobacter vulcani strain W12 sequence2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 335028 37 100.0 37 ..................................... CCCTCGGACTTTTCGCTCTTGCACCGCTAACGGGAAT 335102 37 100.0 37 ..................................... CACTCCTCTCCGCTCAGCATCGATAAGCTGGCGAAAA 335176 37 100.0 36 ..................................... ACCTAGTCATGGATTTTGTGAGGGGAAACTCTCGAA 335249 37 100.0 36 ..................................... AACGTCTCTTCGGAGCATGAAACCCGCCCCTCGTGA 335322 37 91.9 35 ............C.T..A................... AACACATAGGCGCATGACACTTCAATGTGCCTTGT 335394 37 91.9 37 ............C.T........G............. TGTACGATGCAACCGTGTCTACATTTGAACAGGTAGA 335468 37 91.9 38 ............C.T..A................... TAATCTAAGATCTTGAGGCAACGTTTGAAATACCGTAA 335543 37 91.9 37 ............C.T..A................... ACCAGAGTAATAGCTTCCTGGTCGGAAGCTAATTCAG 335617 37 73.0 0 ...G...T.C.TGTT..............GG..C... | G [335645] ========== ====== ====== ====== ===================================== ====================================== ================== 9 37 93.4 37 GGCTAAACGACCAACGCTTCTCGACAGAGATTGAAAC # Left flank : ACATGTTTCATTCTCCTTTATTTTTAAACAGGCTAAACGACCAACGCTTCTCGACAGAGATTGAAACTTGTATCACAGTGAAACGGGCGGTAAGTTTCCTGTTTCGGCTAAACGACCAACGCTTCTCGACAGAGGGGTGCAACTAAATCATTGATAGAGCCATAGAAATGATGAATTTGGCATGGAGTAATGATCGTTTACATCAACAATAGAATGCTTTCTTGCTTATGTTGAATGAAATGCTCAGAAAAGTTCTGTGAGGAATGGGGCTATCCAAAAGAAGAAAGGGAGGGGAGGCGAGTCAAAGCTAAAAGGGAGTCTATTTCTGGCAAGTGATGATGAATTTTGATAAATGAATTACTTGCGCCAGTATAAATAGAAAAATCTCTACAAACATAGTCGTAAATCAGAGAATAAATCTATTTGTGATTTAGTTGCACCCCTCTCGACAGAGATTGAAACAATCATTGTATACTCTTTTTATTTCTAAAAAAATCAAG # Right flank : CTAAATCATTGGTAGAAGTCCTCTATTGATCGAAATGGCTCGACTGAGAGCACGTCCATTGATAATCACATAGGTTAACGTGTTCAGGTTAGCGACAGAGCGATGATTATGGACTCTGGGTCGCTCAATTCCGAGTGCTTTGGCCTGGCTGTTGATGCGCTCGCAACTGGTGCGTTGGGTATACACGGCCTTGTAGAGCGGACTCTCATGATCGAGGCTGACACGTATTCGTGCGCCCTGCTCCCAATTCACATCCTTGACGCAGCCTTTCCCTTTCACACATGGTGCGTGATCGTACCTGTTCCCCGCGGCTTGAGGGAAGAGCAGCGGACAGCGGAAGCGTTGGGCTTGCTAGCCATACGTAGGATGAAATTGAACGGTCGAGTGCATATGGAGCTTGTTCGGGCACCATGAGGCCCCATTCAAGGCTCGCTCATAGACCACATGCCCATATGTAATGCTGCCGTGGTAGACACGGTTCGTTGGTATACATACCGGCC # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:0, 3:3, 4:0.67, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.81, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTAAACGACCAACGCTTCTCGACAGAGATTGAAAC # Alternate repeat : GGCTAAACGACCCATGCATCTCGACAGAGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.90,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : NA // Array 3 359756-360085 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKZW01000002.1 Dictyobacter vulcani strain W12 sequence2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 359756 37 100.0 36 ..................................... TAGATTGCCGTCCACCCCGCGCCGGGGCTCGCTATC 359829 37 100.0 36 ..................................... TGCGATTTCCTGTGCGGTGAGGAGATGGTTGGATCG 359902 37 100.0 35 ..................................... ACTGGATCAGGGAGTTGGGTAGAGAGAAGAATGGG 359974 37 100.0 37 ..................................... ATCCGCAATTACTCTTGGATGGCTTAAATGAGACTTG 360048 37 89.2 0 .......................A.....GG..C... | G [360076] ========== ====== ====== ====== ===================================== ===================================== ================== 5 37 97.8 36 GTTGCAGAAGCGGAAGCATCTCGGTAGAGATTGAAAC # Left flank : ACCGACCCTGACATTGTGGATGTTGGCCGGATATTGCGCAGTCTCTCCCCTCAGGACCGACCTGATCACATTTTTGGTCCTGCCGCCTGGCATGCAACGCTGAGATATACATCTACCGCTGGTTTTAAAAACGATCCCTTCCATAATCAGATCTACGCAGATCACTTACACCTGAGTTTTGAACTGGAGACAGGAACAGATAACCAAGAATAACTACCGCATACTAGAGAGAGCCAACGTTGACGATCAGGTAGATAAGAGCAAATGTCATCTCCTCTAATTACAACATGTTGCGAGGCACAAAGTGGTGAAAATGCTAAGCTCGCTGCCTCGCAAAAACAACGTGATAGTGTCAATGGGCTCCTCAGGCCCTTGTAAAGGATACAGAACTTGTGTATAGTATAGGTGATAGAGATAAAAAGCAGGTCATTCAGCCCATTTTTAGTTTCTGCCTCGCAACTGGTGCATTCAGCGCGCTTCACAAGCGCCGCGAGGCAGCC # Right flank : CTAAATCATTGATAGAGCCATAGAAATGATGAATTTGGCATGGAGTAATGATCGTTTACATCAACAATAGAATGCTTTCTTGCTTATGTTGAATGAAATGCTCAGAAAAGTTCTGTGAGGAATGGGGCTATCCAAAAGAAGAAAGGGAGGGGAGGCGAGTCAAAGCTAAAAGGGAGTCTATTTCTGGCAAGTGATGATGAATTTTGATAAATGAATTACTTGCGCCAGTATAAATAGAAAAATCTCTACAAACATAGTCGTAAATCAGAGAATAAATCTATTTGTGATTTAGTTGCACCCCTCTCGATAGAGATTGAAACCATCATTTGTGGTTTGGCAATGGAGAACACATCATTGTTGCAGAAGCGGAAGCATCTCGGTAGAGATTGAAACAGCGCGTAATTCACGCCTTCTGTGTAACTTTTGAGGGTTGCAGAAGCGGAAGCATCTCGGTAGAGGGTGGGCATTAATGTATTTGTAAAAGTCGTGTGTTGATCGAT # Questionable array : NO Score: 5.95 # Score Detail : 1:0, 2:0, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGAAGCGGAAGCATCTCGGTAGAGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.40,-4.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA // Array 4 363690-364381 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKZW01000002.1 Dictyobacter vulcani strain W12 sequence2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 363690 37 100.0 36 ..................................... AATTGCTGGTGACACTGCTAGGACGAGGACGTCTAT 363763 37 100.0 36 ..................................... CCAATGGTCGCGAGTGTGTCATCGAGTTCTCGCTCG 363836 37 100.0 36 ..................................... ACCACCTGGTTGCGGTGCCTATAGCCAATTTCGATT 363909 37 100.0 35 ..................................... TCAACCATGCCGCATAAGGCGGCACCCAGTGCCAC 363981 37 100.0 36 ..................................... AGCGCCTTACCGGCAGAGTTGCCATCGATGACTGCA 364054 37 100.0 37 ..................................... GGTTCTGGGTTGTAGCTGTTTATTGGCAGGATGCTGC 364128 37 100.0 34 ..................................... GTACTCCTCAAGTTGGCACGCGAGGTACTGGTTG 364199 37 100.0 36 ..................................... AACACTTCCACCGTAGTGGAAGTTGCAGTTGCAGTT 364272 37 97.3 36 .A................................... AGGGCCATTCCCCACTGGCCGTTTATAGGCATGGAG 364345 37 97.3 0 .................T................... | ========== ====== ====== ====== ===================================== ===================================== ================== 10 37 99.5 36 GGCTAAACGACCCATGCATCTCGACAGAGATTGAAAC # Left flank : AAACTGTCGCAGTTGGGTTGAATAGAGAAACCCTTCGCGGATACGTAAAAGAAAGGCTTTCAAGTAGGCACGCTCAGAATGGAGGGGTGGTCGACGATGTGTGGATTGGCTGCGTTCCCATTGCTCGACCAACGACCAATCAATCAAGGAAAAGAAGGCACGATAGTCGGCGACAACAGGATCATGATCAAGTAGGGTGGCCAGGGTGGACTGGTCAAAGAGGTGAGAAACAGGTATCATATCAAGAGACTCCTTTGGAGATGTGTGGTTTGATATAAATACTCTGCAAAGGAGATTTTCTTTTGTCAAGCAAAAACGAGATCAATAGAGAAAACAGGTGGATTTTGCGATCTCTTCTTTAGTTGCTCGTGTTTTTAGAGAATACAGGGACGAGTCGGAATCGTTCAAAGGGCCTTTTTTGAGGAATACTTTAGTTGCACCCCTCTCGACAGAGATTGAAACTCCGCACGATTTCACGGGTGTTCCGCACGATCTTTCCT # Right flank : CAAGCTGTCTGGTAGGGGACATAGACTTCGATAGTTGGGGCTAATTGAACTGTCGGGTGCATACGGAGCTTGTTCGGGCACCATGAGGCCCCATTCAAGGCTCGCTCATAGACCACATGCCCATATGTAATGCTGCCGTGGTAGACACGGTTCGTTGGTATACATACCGGCCATCAGAGGGGGCATCGGCAGTGAGATTGATAGGAAACGCTCCTCATGTGGCAACGGTGTGCCGATACCATGGCTCGAGGTAGGTGACATCACCTTTAAGCAAGGATGGGGGAATAGTGATTCACAAATATGTGAACTGCTCGCTGGCTGTTTGTGCTATGTGCATGGTGAGCAGTTCACGTTTAATTACTATGAGCTAAACTTACTTTTTATACTAAAATGTTTGGCGTATGTGCGTTATTACCTGACGAATCTCCTGGTCTACATTCAACCAGGCTTTATGCCGGTCGGACCAGGATGAAACAGGTTTTCCCCTTGGCAACCACGCG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTAAACGACCCATGCATCTCGACAGAGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.80,-4.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA //