Array 1 21989-22953 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANIK01000082.1 Leptospira alstonii serovar Sichuan str. 79601 ctg7180000004733, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 21989 36 100.0 36 .................................... TCTGAAGAAGTCAAAGCACAGGAAACTGAGAAGGAA 22061 36 100.0 36 .................................... CCGAAATTTTAATTCTTCCCCCGGATTTTCGCGGTA 22133 36 100.0 36 .................................... CCGAAATTTTAATTCTTCCCCCGGATTTTCGCGGTA 22205 36 100.0 36 .................................... GAGTAAGCCCGCCATTTTCATTGACCAGGGAGATAT 22277 36 100.0 36 .................................... GAATTAAAGCATGGCCGTAAAGAGAGAAACGAAAGA 22349 36 100.0 36 .................................... GAAAGGCATCAATATAATCTGTCCAAAACCCAGGAT 22421 36 100.0 34 .................................... AAATCGCAGAGGATCTTAAAGAACTAAAATGGAA 22491 36 100.0 35 .................................... ACAGAAATTATGAATTTTCTTTTTCAAAAACTATC 22562 36 100.0 37 .................................... TATCATAGGATTTCTCGAAGATTCTTAGGCGATTTTT 22635 36 100.0 34 .................................... CCGACTACGCCGGAGAGTGGTTTGTAGTGGATGC 22705 36 100.0 35 .................................... AGCACGAATTTTCAAGAAAGAAAATGGCCCAATGG 22776 36 100.0 34 .................................... GAACCAGGGCAGTCGGGTTTGATTTTGCCTACGC 22846 36 100.0 37 .................................... TTTATTCTGATTACGATAGGTGGCGCAACGATTTAAT 22919 35 91.7 0 ..........................G...-..G.. | ========== ====== ====== ====== ==================================== ===================================== ================== 14 36 99.4 36 CTGAACATACCTTTGATGCCGTTAGGCGTTGAGCAC # Left flank : GAAATTGGCAAAAGTCACTGAAAAAGAAGACGATGTTTTCTATCTTACCCTTTGCACCAAATGCGCCTCAGGCGCCCATACCCAAGAGAAAAAATCCGCTTGGCCGGAGGCTCCAAAAACTCTGAAAATTCTATAATTCAAGTATCTCTTCAGGGCATAGACATAATTCTATCTATAAACAAAGCCTTAAATCCTCAATCTAAGTTTAGTTCCGGCATCTATCAACTTTCATTAGGATTTCTGAATCCTCTCGATTCTATGGTTCTCCGCGGCTTTTTTTCTTCCTTGCGATAATTCCGGTTCCTTTTAGGATTGAAAATGTATGGAAACGTACTTGATTCTTTAAATCTTAACGGTAAAGACCGAGAGAATCAAAATTCGATCCGTATCGAAATCCAGAAGATGAAAAAGAGAAATATCCGACTATATGCTTGTTTTCCCTTTACAAATTCCCGTACATCCGCAACCTCTCCTCGTAAAAGCCATAAAAACAAAATGCT # Right flank : CTTTACATACAATAAAACGCAAGCGTTCCGACAAAAATGGAGCTTTTTACTTGCAAAAAGTATGATTTTCTAATAGAGAAATGCCACCGGAGTTTTCCCGCCTCCTATTTCGCGATCCTGAAACGCGATCCATAGAGAGCCATAACCTTACCCACAAATATGAGAAAAAACTAGATTTTTCAACCTTTATTTCCAAAGTTAGTAAGGGCCTTATAATGAACACTACACATTGGAGTAGTACACTCGGAACGGAATTAGATTGGGTGGAAGAAGAATATTTATCGCTGAACTTGGGAGATACTCGATTAGATAAACGACTCAAGAAAATCGTGAGCGTGATGACAAAACGAGGAGGAACGAGTTTGCCAGATATATTTGGCAATTGGTCAGGCACGAAAGGAGCGTATCGCTTTTTTTCGAATCCGAAAGTATCATCGGAAAAGATCATAGAACCTCATAGTCAAGCAACAAAGAAACGACTTCACCAACAAGAAACAGTC # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGAACATACCTTTGATGCCGTTAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.80,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //