Array 1 123144-124575 **** Predicted by CRISPRDetect 2.4 *** >NC_017130.1 Acetobacter pasteurianus IFO 3283-26 plasmid pAPA26-013, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 123144 29 100.0 32 ............................. CGGTCGATATTAAGGCGGAAGAGGGGGAGGCC 123205 29 100.0 32 ............................. CCGAGGCAGATAGAGCTGTGGAATGTGTCATG 123266 29 100.0 32 ............................. CACGCTCTCCGTGCCTCAAATCCATTGTGAGA 123327 29 100.0 32 ............................. ATAGCGGCACCTGCGCCAAACCCCATTTTCAG 123388 29 100.0 32 ............................. TTCAGCGTTTGGCCATCAGCAAAAACTACCGT 123449 29 100.0 32 ............................. CGGGGCGGCTGTTGGTAATGCAGACAATCCGT 123510 29 100.0 32 ............................. TCGCCCACGGCCTGCCAAGACTTGCTCACTTC 123571 29 100.0 32 ............................. GCGGTGGATAGGCCTTCCATATCTGGCAGGTA 123632 29 100.0 32 ............................. CCCGCGTAGCATGTTTGCGCGTGCACCGCCTG 123693 29 100.0 32 ............................. TCGGGCGTCTGGCCGGTCGCTGAGGCTCTCAA 123754 29 100.0 32 ............................. CCGCCTGACCGTCTGACCTCCTGACCGCCTGA 123815 29 100.0 32 ............................. GCGTATCGGTCACAAATGCAGAACCGGCTGGC 123876 29 100.0 32 ............................. ACGCGCGCGGCGGGTAGTGTAAAGAACAGCGC 123937 29 100.0 32 ............................. CCCCGACCGTTGGCAATATTACCATCACGCCT 123998 29 100.0 32 ............................. ATATTTGGACAGTTCGCCCCGGCTGGTAATGT 124059 29 100.0 32 ............................. TCGCAGCGGAAATCATTGTTGGCAATAATGCC 124120 29 96.6 32 ............................A CGTGGCCCATGCATTCTTCTCTGGTGACGAAC 124181 29 100.0 32 ............................. TAACAACAACCTAGCCGCCGTGGTAAATACCA 124242 29 100.0 32 ............................. CAGCACAAAGCCAGAGACCAGAAGGTTTATGC 124303 29 100.0 32 ............................. ATCTTGGGTTTGTTGACTTCCGGCATCGTGAT 124364 29 100.0 32 ............................. AACAGCCCCGCATACCGGCGCATATTGACGCA 124425 29 100.0 32 ............................. AATTGCCGGGTCTGGCCGCTACCTGCAAACTG 124486 29 100.0 32 ............................. GCTAAAAATGGGTGATTCCAAAACCAAAACTA 124547 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 24 29 99.9 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : TATTGGCTGCTGGTGGAACTGAGGCACCATCCGTACAGCCTGAAGCAATGCCGGTTGCTTTCGCAGATCCGAAAGGTTCGGGTGATGTTGGTCATCGTGGTTGAAAATGCTCCGCCACGTTTGCGTGGGCGGTTAGCTGTATGGCTTCTGGAAGTGCGGGCTGGGGTTTACATTGGCAGTTATGGCCGGCGTGTGCGTGAAATGATATGGGGGCAGGTTTGCGCCTATATTGAAAATGGCAATGCTGTGATTGCATGGGCGGCCCCCAATGATGCTGGGTTTGAATTTGATACCTGCGGTAAGAATCGTCGCGTGCCTGTAGATCTTGATGGCTTGCGTCTTGTTGCTTTTGGGCCTGAAGCCGCTCTTCCTATACATCCTGGACCAACAACGACAATGCTTCCAAGGCGACGTGGAAAAGGGTAATATACCAACTCCATTCAGTTGGTGGTTTCTTTGACAATAGAATAATTCTTTAAAATCAACTATCTTCACGAAGA # Right flank : GACGCCTAACATGTCTAGGTGTTTGGTCCCGGGGTTTGATGGGTTGGATTGATGATGAATCTTTCTGGCTCTGAAGTCCATATTTTGCAGAGGTATTCGTAAGGCGTGAGGCCACTCAGCGTCTTGAGCCTTCGCCCGAAATTATAAGCTGCCATGAAGTCGTTGAGGTGTGTCCTCAACTGCTCATGACTGTCGTAATGGAAGCGTTTGACGGTTGCCTCTTTGATTGTCCGGTTCATCCGTTCAACCTGACCATTGGTCCAGGGATGATTGGGTTTCGTCAGACGATGTTCGATCCCGTGGGCTTCGCAGATCATGTCGAAGCGCATGGGACGCGACCAGGCCGTATTGCGATTACGGGGTTGGTCAGCGAACTGGATCCCATTGTCGGTCAGGATGGTGTGGATCCGGTAAGGGATGATGCTCAGGAGATGTTCGAGGAATTCCCAGGCCGTCTTCCGATCAGCTTTCTCGACCAGTTGTGTGACAGCGAATTTGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //