Array 1 65173-64966 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI530699.1 Acinetobacter gyllenbergii NIPH 230 adfcq-supercont1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 65172 28 100.0 32 ............................ TAAGCAGAAAGTGCTTGTAGGTTGGCTTTTAA 65112 28 100.0 32 ............................ AGCTTCATTATGCAGCCATTCCGACATACCTG 65052 28 100.0 32 ............................ TTACCATCTTTAAGGAACTTTAACTGTTGCGT 64992 27 85.7 0 ....................CA..-..T | ========== ====== ====== ====== ============================ ================================ ================== 4 28 96.4 32 GTTCATGACGGCATACGTCATTTAGAAA # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATTGCTCACCACGTGCTTCCGAAGAATATTGAATCAGACCCTTTACCGTTCTAAA # Right flank : TAATGTTCTAACTGGAGATAAGATTTAAACTGAAAACCCCGATGTATCAAAGAATTGAAAGAAATAGGAAATCGAATTCTGGCAGTTTGTAATACTTGAAGAACCCATGTTTTTTCAGCTAAAAATTCAAATAAGATTTTATCATCAGATATCCTCGGGCCAGTAAAGATATCTGTCTGATAAACCAGCCCTATCCACAATGACTCCAACAAGCTATTTTTATCCAGATCGACTAACGCCAAAGTTAAAGTTTCCTCAAAGATACAATCATGGGTAAGGAAAAGCAGATAGCAGTGAGAATATACACAAACCACACCTTCTAACACTTTACCCTCAACCACAACCCCTGTCTTTTTTCCCTTAATCACGACTTCCGACTGGGGCAAACTCTTATCTGTCATATCTTGGATCAATGCTAAACCAATATAATCAGCCACATACATATTCAAACTTACCTAATAAAATTATTACTGATTATATTTACATCTATTCCTTTTGCC # Questionable array : NO Score: 5.68 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGACGGCATACGTCATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: R [matched GTTCATGACGGCATACGTCATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.50,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 213178-216205 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI530706.1 Acinetobacter gyllenbergii NIPH 230 adfcq-supercont1.4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 213178 29 93.1 31 ......A....T................. CACAGTTAGAGGGAAAGCCTGATGCAGCCCC 213238 29 93.1 31 ......A....T................. AAAGGCGGTGCGCCTTTTCAACTGTCAGATC 213298 29 89.7 31 ......A....T................A GTAAAATCCCAATCAAAGACCATCTTGGCTT 213358 29 93.1 31 ......A....T................. ACATAGCACGCGCGTGTGGCGGGCGGACGGC 213418 29 89.7 31 ......A....T................G TTGCGTTCAAGCCAACGTTTTTTCATGCGTG 213478 29 89.7 31 ......A....T................G CAGGCATCTTCATTGCACTGGGCAACTGTAC 213538 29 89.7 31 ......A....T................A TTTGCTTCCACTAATTTCAACATATCCTCTG 213598 29 93.1 31 ......A....T................. GAAAAAAAATGCTTCATGATTGCTTCAACGC 213658 29 93.1 31 ...........T................A TTACAAAATGTAAATCCACGCCCTGCTACAC 213718 29 93.1 31 ...........T................A TCGAGACCATTTTTACCGTCTAAACCGTTGC 213778 29 96.6 31 ...........T................. TGGATTATCAGCAACCATGCCATCAATCTTA 213838 29 96.6 31 ...........T................. TTTGATGCAGCTAACGTTGTTGTGAATCCCG 213898 29 93.1 31 ...........T................A AGAACAATTTAAATGGTCTGCTGAAATGTGT 213958 29 89.7 31 ...........T....A...........A CCTCGGATAAACGAATGGCATTGATTAGTGT 214018 29 93.1 31 ...........T................A TAATGGTTATTTACTTTACCGCCTAAGCCTG 214078 29 96.6 31 ...........T................. CGCTATGATCAAACGTGGAATACCAATAAAA 214138 29 93.1 31 ...........T................G TTTTCGAGAGAAAAATTTGCTGAAGATTCTG 214198 29 96.6 31 ...........T................. TGGCCTTTTAATATCAACTCACGATTATCTA 214258 29 93.1 31 ...........T................C AAAAAAGGAAAAACCAACCAAGGTCAAAGCC 214318 29 96.6 31 ............................A ATAACAACATACAGCATGCCACTCCATCTAT 214378 29 96.6 31 ............................A TACTAGCTCCATGTGATGTTACCGAGCACTG 214438 29 100.0 31 ............................. TGCAATTGCTGCACTTGTTGGAATGATTGGC 214498 29 96.6 31 ............................A GCTTAAGGCTTCACCTGCAAAGATCATGCAA 214558 29 96.6 31 ............................A ACATTATTTCGTAGCGTGTGTAGGTCTTTGC 214618 29 93.1 31 .................G..........A TATAATTTGATAAGTCATGTCCATCCATAAT 214678 29 96.6 32 ............................C ATCGACAAAGCTCAGGCTTCTCATTTGCAGGA 214739 28 93.1 31 ........................-...G TTAAATTCACCCTTAGAACTTTTTGCACCTA 214798 29 100.0 31 ............................. GACATGATGAGCGCTGGCTTTTGCTGAAAGA 214858 29 96.6 31 ............................A ATAGTAATACGTACAATTTTATTGGGGATTC 214918 29 96.6 31 ............................A AGCCATGCTCAAACAATGGGGAGGATGAAAT 214978 29 100.0 31 ............................. ATAGTGCCATTAATAATTTGGCTCAAATAAG 215038 29 100.0 31 ............................. TGTTATTGGTAGCCGCGAATCAGGTAAATAC 215098 29 100.0 31 ............................. TTTGATGACCAAAATATTAAAGAAATTACCG 215158 29 100.0 31 ............................. CACTTGCAACGTTCAACGGTAATCAAAGAGG 215218 29 100.0 31 ............................. CGTTGTATAGAAGCACATCGGTTGGTAAGAG 215278 29 100.0 31 ............................. AGACAACAGCCAATCAATTTCAAAAAGTCGA 215338 29 96.6 31 ............................C ATATGGATCTTTAGTGTCACATTTTGCATCA 215398 29 93.1 31 ...........T................A GAAAAAATAGTTCGAAATGGCCGAGTTATCA 215458 29 93.1 31 ...........T................C AGTCATTTGTAAGTTCGACAGGGCAAGGGAA 215518 28 93.1 31 ...........T.......-......... CGATTGGGAATAAAGCAGGGGCCAACACTGA 215577 29 96.6 31 ...........T................. AGGAAAGGACGAATAATGAAAAGCTTAATCA 215637 29 93.1 31 ...........T................A ATCTTTCTGAATAACTCTTTTATTTAACATT 215697 29 96.6 31 ...........T................. AAAACGACACGTTCAACACCATCAACCGTAG 215757 29 93.1 31 ...........T................A TTAATCGTGACATTCCTCATCGTTTTCCCAG 215817 29 93.1 31 ...........T................C ATCTGAACGATGTCCACTGGATCGACCACAG 215877 29 93.1 31 ...........T.....T........... GCGACTGATAACGTATCAAATGCCAATTGAA 215937 29 100.0 31 ............................. TATCGAAGCCGGTAATACCAGCTAACCTACT 215997 29 93.1 31 ...........T................C CACATTTTTTCCCACACATTTTTAACATCCA 216057 29 96.6 31 ...............T............. GACCATCGTTCAAATGACCAAAGCTTGAATA 216117 29 96.6 31 ............................A GTCGTATTACTTCCTGTGATCTCAACTGAAA 216177 29 82.8 0 ..................T.....TTTG. | ========== ====== ====== ====== ============================= ================================ ================== 51 29 94.9 31 GTTCATGGCGGCATACGCCATTTAGAAAT # Left flank : GGGAAGTGGTTGGAACGATTTGTGGACTATGTCCATTTCACCCAACCACGCGAAGTACCTCAAGCTAAAATCATGGGTTACGCTCATTATTTTCGAATTAATCCAAAGATGAATTTAGAAGAGCGTATTACTCATCAAGCACAGCGCCACAATATTTCTTTGGATCAAGCGAGGCAGCACTTTAAGGAATATATTGATCAGCCTGTAATTGAACCTTATGTGAGCTTAAAAAGTCTGAGTGCCAAGCGAGAAGAAAATATAGATCGACCGTATCGCCTATATATTGGTAAATCTGTTGCTGATGAGGCAAAGGAGGGAACATTTGGAACTTATGGGTTAAGTCGTTTCTCAACCGTACCAGAGTTTTAACCCAATTTTTTTTGACTCTTTAACAGCTTAATAAAATCAATGAGTTACAGTAAGTAGTTTTTTGATTGGGCAAAATGCCTAAATCTACATTAACTACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TGAGGCAAAGAGTAGATAGGTTAATTAATAAGAACTTATACACTCCCTATCTTTAATTTTTAACCAAGAAAATATACCCTAAAGTTAATGTAATTATAGTGAATAGTGAAACGTTCATGCGCGGTCTTTATCTCATCACCAATGATGATCCAATCCAACTATTATTAGAAAAATTAGACGTTGCATTAGCAACAGGCAAGATTGCCATTCTGCAATACCGTCGTAAGAAAGTGGCAAAAGCAGATCAGCCAAGTGAAGTAGAGCAGATCAAAGCACTTTGTGAAAAGCATCAAGTCCCGTTTGTGATTAATGATGATTTGGCTTTGGCTGAACAATTTGGTCTAGGTGTACATCTTGGGCAATCTGATGGTGAAATAAGTGATGCTGCCACACGTTTACCACAAGGTGTAATTATTGGTCGGACTTGCTTAAACTCATTAGAGCTGGCGGAGAAGGCGATTGCTGACGGTGCAACTTATGTGGCCTTTGGTGCGGTTTAT # Questionable array : NO Score: 5.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.22, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAAT # Alternate repeat : GTTCATGGCGGCATACGCCATTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGTATACGCCATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //