Array 1 38237-38404 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUMC01000018.1 Butyricicoccus sp. OF10-2 OF10-2.Scaf18, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 38237 32 100.0 36 ................................ TTTTTCTACTAGCTTGACGGCAGCTACAGCGTCAAC 38305 32 100.0 35 ................................ TTGATGAGCAGACCGGGTTTCTTGGTGTTCTCGAT 38372 32 93.8 0 .......T.............C.......... | G [38389] ========== ====== ====== ====== ================================ ==================================== ================== 3 32 97.9 36 GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAT # Left flank : TTTGTGGAAATGAGGTGTCGAATATGCTGGTTGTGATTACTTACGATGTCAACACCGAAACAGCCGCCGGGCGCAAACGCCTGCGGCAGATTGCCAGGCAGTGCGTCAATTATGGACAGCGTGTGCAGAATTCCGTGTTTGAATGCCTGATTGACGCGGCTCAGTGCCGTATGCTGCAACAGAAGCTGTGCACCATTATGGATGATGAACTGGACAGTCTGCGATTTTACTATCTCGGCAACAAATATGAAAATAAGATTGAGCATTTTGGTGCGAAACGCGGCTATGAGCCGGAAGGCGTGCTTATGGTGTAAGGCGGTGCGAAGTGCAAGCAAACCGAAAAGCGTCGGCGCTTCGCACCGTAATTTCCGATAGATTATATACAATAGTTTTATCGAATGTCAAATTTGCAATTGTGTTTTGCACGAATCTATGCAAAACTGTTATTGTAATTGTTTATTTTGTAAAAATCATTTGGGATAGTCTTGGTGATTTTTGCT # Right flank : TTTAATATGCAGCAGTATGTCCGCAGATACGCCTTGCGTCGCTCCCTTCACGGGAGCGACACAGATAGCCGCACCACCATCCCCGATCCCCATCCCTCACAATCTTTCACCCATCCCGACCAAAACATTTGCACATGTCATGACACATGTGCTATAATAACTCCAATACCGCTATTGACAGCGCCGCACAGATTGCTGCGGCGTTTTGCCGGGAAGGAGAAAAATCAAATGAAAGCATACTTTGACAGCATCGAAAAGGAGGTTCCGGAGCAATTACAGCAGGTTTTCCTTAATCGCCGCGATACGGCTGTCATTACGATCGATATGCACGATGGACACCTGTCAACCGATCTGGACTGTCCATGTCCGTCTCCGCGAGGACGCGAGATCATCGAACCGCTCAATCATTTCATGAACGAAGCACGCTCGCTCGGTCTGCCGATCATCCATGTCCGCTCAACGCTGCGTAAGGGCGGCGCAGATGAAAAGCTGTTTCCGTC # Questionable array : NO Score: 8.26 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.00%AT] # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 14502-15137 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUMC01000045.1 Butyricicoccus sp. OF10-2 OF10-2.Scaf45, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 14502 32 87.5 36 C..TT...A....................... TTATGAAAAGGAGTGATTAATATGAGAAAGATAAAA 14570 32 96.9 31 ...........................A.... GATATGACGGAATCAAGACGCAAGACGCTGA 14633 32 100.0 37 ................................ GCGGAAACGGCAACCCGACGCTGACGCAGTTTCTCAA 14702 32 96.9 32 ........................G....... GGCGGAGAGTGCGCCGATGTATGACCGCGAAG 14766 32 93.8 37 ...A........G................... CGCGAACGTGGAGGAGAGCCGCCAGAACGAGGAATAC 14835 32 100.0 37 ................................ TATGATCCTGAAACCGAAAAGATAATTGACTATCCTA 14904 32 100.0 37 ................................ CCGTGATGATGTGACAGGCAAGGGATGGCACTATCCG 14973 32 96.9 34 ............G................... CCTTCGTTTCTTGGATGCTGGACCTGCGTGACCC 15039 32 93.8 33 ...................A.C.......... GACCGCTATGACGGCCGTGGCTGCATCTTCGAC 15104 32 96.9 0 ...............................T | C,G [15108,15119] ========== ====== ====== ====== ================================ ===================================== ================== 10 32 96.3 35 GTTGCTGTCCCCATAGGGGTATGAAATGTTTC # Left flank : AGGTCAACACGATGCAGATTGAGCATATTGATTCGGCGGACACGCTGCTGCAGCTGCCCGAGCACCGCACAATGAAGCTGCGGTTTCTCACGCCGACCGCATTCAAAAGCGATGGCAGCTATGTCAATCTGCCGTCCGTGCCGCTCATTATGCGAAATCTGCTGAACAAGTGGAACGGCTGTTTTGCGGAGGTCTGTCCGATCGAGGACGAGGACGGCGAAGGCATTCAGGCGATCGCAAACGGACTTCGCATTGCCGAGTACCGGCTGTCGAGCCGTGATTATCTGCTCAAAGGACAGTCCATTCCCGGCTTCACCGGAGAACTGACGCTTAAATGCCGTCTGGATGGGTTTCATCTTACGATGGCGAACCTGCTGCTGCACTTTGCACCGTATGCGGGTGTCGGCATTAAAACCGCGCTCGGTATGGGCGGCGTAACATGTGAATAACAATAGCGGATAAAGTAAAAACCGATATGTCGAATTGGACATATCGGTTTT # Right flank : CCGACCGC # Questionable array : NO Score: 2.58 # Score Detail : 1:0, 2:0, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCTGTCCCCATAGGGGTATGAAATGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.20,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [5-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-5.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA //