Array 1 16312-13048 **** Predicted by CRISPRDetect 2.4 *** >NZ_BDHJ01000015.1 Streptomyces sp. NBRC 110465, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 16311 29 100.0 32 ............................. ATCGAGCGGACCGTCACCTTCAAGATCAGCGG 16250 29 100.0 32 ............................. CTGTCCGAGGACACCGTCACTCTCGACGGCCC 16189 29 100.0 32 ............................. GGCTGGCCGCAGGGAACGTCACCTCGGAACGG 16128 29 100.0 32 ............................. CATCGGGGACGGGGCGGTGCTCATCCCAGGGC 16067 29 100.0 32 ............................. CCGATCGAGTTGGTCCGGCCTGGAGACCTGGT 16006 29 100.0 32 ............................. TCGGAGGTTGGGCGGATGCTTACCAGCGTTGT 15945 29 100.0 32 ............................. ATCCTGTATCAGCGGCCGGCTCTGCTGGAGCA 15884 29 100.0 32 ............................. ATCGACGCCACGATCCCGAGCATCCTCGCCCA 15823 29 100.0 32 ............................. CCTCCGGCGCCGGCCGATCCGCGTTCGGGGCC 15762 29 100.0 32 ............................. CTGTCGACGAACGCCGCCGCGCTGGTGTGGTC 15701 29 100.0 32 ............................. CGGGCGGGGGTGACCTGGTGACCGCCGATGTC 15640 29 96.6 32 ............................C GGTCCGCGTGACGGCGGGCGGGGCGTCAGTCC 15579 29 100.0 32 ............................. AGGCTCGCTGCTGCCGTCACGCACCACGCGCA 15518 29 100.0 32 ............................. CGCTTCGTTCGGGTCGGGGTCGCTGTCGCCGG 15457 29 100.0 32 ............................. CCCCCGGGGCCGTGGGGCCTTCGCGGGGGTGT 15396 29 100.0 32 ............................. CTCGCCGAGGACACGGACGACATCGAGGTGGC 15335 29 100.0 32 ............................. TCTGTAGGGTCAAAACAGCAGGTCAACGCGTC 15274 29 100.0 32 ............................. GTCGCGCTCCTCTCCGACCGGGCGTTCCGGCT 15213 29 100.0 32 ............................. CCGAGCGGCGCCTCAAAGCGTTCGGCCGGTAC 15152 29 100.0 32 ............................. GTCGCGGGGAGCCTCACGAAGGCGCTGGTCCA 15091 29 100.0 32 ............................. ATCGCCGCCGCCCTGTACGAGCAGCAGCTCCG 15030 29 100.0 32 ............................. GTCGCGGGGAGCCTCACGAAGGCGCTGGTCCA 14969 29 100.0 32 ............................. ATCGCCGCCGCCCTGTACGAGCAGCAGCTCCG 14908 29 100.0 32 ............................. CGCCGGAGCATCGCCAGCACCTCGGCGTGGTC 14847 29 100.0 32 ............................. ACGCTGTACTTGGGGGGTGGCGCCGACGTCAG 14786 29 100.0 32 ............................. AGGCCAGCCGATTCGGCCGCCAGCTTCTGCTC 14725 29 100.0 32 ............................. GAGGTTGAGCACGGCGTCCCCGACGTTGCGGA 14664 29 100.0 32 ............................. GGTGACGAGCTTGAACCCGGTGTACATCTGCA 14603 29 100.0 32 ............................. CCCCACGATTCTGGTCTTCGGCTTCCTCAACA 14542 29 100.0 32 ............................. GACATGGCGGTCGAGGCCGTCGAGGCGCTCGC 14481 29 100.0 32 ............................. GCGGAGGGTCGGACGTTGCAGATCTTGCACAC 14420 29 100.0 32 ............................. GACTGGCTGGCCTACGGCAAGGACGCCCGCCG 14359 29 100.0 32 ............................. ATCGGATACACCACCAACCTTTCCAACCGGGT 14298 29 100.0 32 ............................. GACGCTGAGTACGATCTCGTGCTCACCGTCGT 14237 29 100.0 32 ............................. ATGCGGACGTGACACTGAATCGCATCGGAAAC 14176 29 100.0 32 ............................. GCCGAGCAGGCGCACGCTGCCGCCCCACTCGG 14115 29 100.0 32 ............................. GAGTGATCGTCATGCCCCGTGGTGGAGCGCGC 14054 29 100.0 32 ............................. CGCTTCGTTCGGGTCGGGGTCGCTGTCGCCGG 13993 29 100.0 32 ............................. GTCGTGCGCCCCGACCACCTGGCCGCCGCGTT 13932 29 100.0 32 ............................. CACCGGCGCCTCGGTGAGACCGCGTGCGACCC 13871 29 100.0 32 ............................. GTGGGCGGAGGGCCGCTCATTCAGATCATCGT 13810 29 100.0 32 ............................. CGTCTGACGGCCGGGCAGGTGATGGGCTCGTG 13749 29 100.0 32 ............................. TCCACGCTCAGGTTCACGTCCGGGGTGGAGAC 13688 29 100.0 32 ............................. GACTTCGGGCCCCGGATCATCCGGACCTGGAC 13627 29 100.0 32 ............................. CTCCTGGACGTACACAGGGCTGCTGCCGAGCG 13566 29 100.0 32 ............................. AAGACCGGGCCTCTCGCCTCCGCGCTTGGCGT 13505 29 96.6 32 ......................C...... GCCACGAAGACGTGGCGCAGGTACGCCATCGC 13444 29 100.0 32 ............................. ATTGGGCTTGTTCATCAGGTTCCTTCGTGAGA 13383 29 100.0 32 ............................. GGCGTCACTGACGTGACCGGGATCAAGGCCCC 13322 29 100.0 32 ............................. CGTAACTCCCTGCACAAGGTCCGGTGCCACGG 13261 29 100.0 32 ............................. CACCCCCCGAACACCCCGCGAACCTCCACGGT 13200 29 100.0 32 ............................. AGGCCATGGGCGGCACGGCCTGGCGGGTGAGA 13139 29 100.0 34 ............................. GCGGACGGTCGCGGCCATCGCGACCCGGGGCGAC 13076 29 93.1 0 ................G.A.......... | ========== ====== ====== ====== ============================= ================================== ================== 54 29 99.7 32 GTGCTCCCCGCCGACGCGGGGGTGTTCCG # Left flank : TCTCCCGCGCATCGTTCGGGACGTCCAGAGCCTCCTGACACCGCGCTCCACGGATTCCACGGACGAAGACGAGCCACAGGAGAAGCGAGACGTCCAGCTGGTACACCTCTGGGACCCGAAAGCCGGTGCCCTACCTGCAGGCGTCAACTACGCGGACAGAGGTGAATGATGCCGTCCATGCTCGTGATCGCCACCACAGCCGTTCCCGATCACCTCCGCGGAGCACTCAGCCGTTGGACCAGCGAGGTCGTACCCGGCATCTTCGTCGGGAGCGTCTCGGCCCGCGTCCGCGACCAACTCTGGCGAGCCGTCACCGACACCGTAGGCAACGGAGCCGCCCTCCTCGTCCACCCCGCCCCCACTGAACAGGGGTACGCCATCCGAACCGCCGGCACCCGCCGCCGCGTACCCGCCGACTTCGACGGGCTCACCCTGATCCGTATGACCGCCCCAAAGGTAAATGAAATGCAAAGCCCCTTTTAAGGTGCAGGTCAGGAAGT # Right flank : AGCTGACATGGGCGTGCGTAATACCCCTGTGGGGGCCGCCACCCCCGGCCGTGCAATAGCGGAATAGTCCTCTGACCTGCGATTTTGTGACCTTGGTGTCGTTGCTCGACTTGCGTCTGTGGCGGCCTGTTTCCAGGTGTTTCCGCCTGTTCCTGGACGCTGTTGGTCACGCGTTGGTCATGCGCTCCCTGTTGGCGGCCTCTGGCTGTAGCAGGGCCGACGCTATCCGGCCTGGCGGGGGCCGACTTGCAGCACGAAAGCTAGCAACAGGATCGGGGGCCCGGCTCGTTTGAGCTGGGCCCCTCGTTATTGGTGTGTGGAAATAGATCGGTGCCTCGCGATGTTGAGTAGCTCCTTACCGAAAGAGGGGGGCGGGGTAGTGAAGCTGTTCCGTGCGGACACGGCGAACAGCGGCATGGCGGAGGTGGTGCCGCGTCTTGCTGAGGTCGAGGCGGACGTGCAGGGCCTCGTTGAGGCACACATGGAGACGCTGCTGGGCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCCGACGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCCGACGCGGGGGTGTTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.20,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 26179-27915 **** Predicted by CRISPRDetect 2.4 *** >NZ_BDHJ01000015.1 Streptomyces sp. NBRC 110465, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 26179 29 100.0 32 ............................. CCCGGCCCCGAACCACCCGGCCCCACCGAGCG 26240 29 96.6 32 ............................T CACGGCGCCCCCTTTCTAGAGCGCGGCGCGCA 26301 29 100.0 32 ............................. TCATACGCCTTCGGGTCGGGCTCCTCGAACTC 26362 29 100.0 32 ............................. GCGAGCGCGGCCTTGATGCGCACAGGCAGGTC 26423 29 100.0 32 ............................. TCCGGGCAGAGGTGCTTGTGGACTGCGTCAAG 26484 29 100.0 32 ............................. GTCCGCCACGTAACCCGCCCGGAACAGCTCCG 26545 29 100.0 32 ............................. GGTAACGGCGGGACGCCTCCCGTACGGACCCC 26606 29 100.0 32 ............................. CGAGAGGTGTCGACGAGCCCTGACCTGGCGTC 26667 29 100.0 32 ............................. AACTCGATGCGCCCGGCGAGCAGCCACGTCTC 26728 29 100.0 32 ............................. ATCCGCCCGCGCGGCCTCCGCGTACCGGAGTC 26789 29 100.0 32 ............................. CTGGACGCCAGCACGATGCGAGCGACCTGGGC 26850 29 100.0 32 ............................. CGGGCCCTGGCGTCGATGAAGGGCAAGTGGCG 26911 29 100.0 32 ............................. GTCGTCGTCCTCAACAAGGGGCACATCGCGAA 26972 29 100.0 32 ............................. TCCGAGCCCCGCGTCTTCTGGAAGACGGCCAC 27033 29 100.0 32 ............................. CCGGTCGGGACGGTCCGTCGTATCCCGCATGG 27094 29 100.0 32 ............................. CGGTTCTCTGGCCTGTTCGAGGTCGGGCCGTG 27155 29 100.0 32 ............................. CCGCCGAGCGCGCTATCAGCGCGGTCGCACGC 27216 29 100.0 32 ............................. GAAACCCGAGCTGTTCTGGCGTGGGCCGAGCA 27277 29 100.0 32 ............................. ACGTCCCCCGTCGAACGGCACCGCCGCCGCGG 27338 29 100.0 32 ............................. TCCGAAGGGGTCCGGGCCGACCTGGAACGCCG 27399 29 93.1 33 ..........................T.C GGCGATCGGTCTCGCCGACGACATCGACCCCGA 27461 29 100.0 32 ............................. TACGAGGTCACCGCTGACATCCGAGAGACGGG 27522 29 100.0 32 ............................. GCCGACGATCAGGGCCTGGTCGAGGGGCTGGT 27583 29 96.6 32 ............................A GGACGAACGGGGCCGCGACCAGGAAGAACGCC 27644 29 100.0 32 ............................. TCGTCGTGATCGATGAGGTGTCCGCGTTCACC 27705 29 100.0 31 ............................. CCCGCTACCGCGAACTCGGCTACGTCGGAGC 27765 29 100.0 32 ............................. GATCATCATGGCCGTCACCTTCGGTCCGCTCC 27826 29 100.0 32 ............................. GGAGTCGGTGACCTGCCTCGGTCATCCGTAGG 27887 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 29 29 99.5 32 GTCCTCCCCGCCGCCGCGGGGGTGTTCCG # Left flank : GGCCAGCACACAGACCGACGAGCGCCCGAGCACGGTCCACTTCCCCGTCCAGGCCCATCCCCTCGGATATACGCGCCCTCTGGTTCTCCGCCAGGTACACGTCCCACAAGTGGAGCGCCATCGCGGCCGCGTCGAGAAGATGCCTCACCAGCGGATAGGGCGGCAATGACGGATCCAATCCACGGAACTTTCCCCACACCGACTCATCCACCACGCTCCGCCTGTGCAGCACGCCAGCCCTCTCCGCTCCACCACTCGAACCTGATCTTGCAAGGGAAGCAAAACCGCCACCGATCGCATACAAGCACCTGGCACTGACATTGACCTGGCTATCCGCGTTCCGACGGTCGTTCGTGAGCCCCGACGGGGCGCCCGTGCGCTCTGGCGACCTTGCAAGCTGCATCTGGATAGGGTGATGACATGCGTCCGACGAAGCATCTCACCCCCTCAAGAATGGCAAAGAAGATGCAAAGTCCTTCTTAAGGTGCAGGTCAGGAAGT # Right flank : GATCGCCGCCGCCCTGTATCGGGAAGCAGCCGCGGGAGGGCGCGGTCGTCGTCGTGTCCCGTCCGTCACCTCCGGGGACCGGTCGCCACCCGGGACGGGCCCCCGCGGATTCTCACCCACCCTTTGGGGCGTTCGCGCCACAGGCCATCGAGTGGCGGTCACCGGCCACGGCGGCTCCGGTCGGTACCGGAGCCGCCGAGTCACTCACTCCACCAGGTAGTGGAGTCGGTCCACCACGTGCGGTCCGTACCCGAACCGCTCACCGACCCGCTCCAGCCTGCCGTACAGATCGCGGGAGACCCGGGACCCGAACGCCTCGAAGCCGTGCAGCAGAAACCGGAACGCGATCTCGCTGCACACCCTTTCCGCACAGCGCGTCAGCGCGTCGCGTGCTTCCGGCAGGGTGACTCCGACCGCGTCCTGCCGCGGGTCCAGCCGGTCGATCAGCCCCTTGACGTCGTCGGCCAGCAGCCGGTGCTCGTACATCGGTGAAGGGACAC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGCCGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCGCCGCCGCGGGGGTGTTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //