Array 1 3394-677 **** Predicted by CRISPRDetect 2.4 *** >NZ_LKBA01000016.1 Aliiroseovarius crassostreae strain CV919-312 NODE_22_length_12746_cov_264.634_ID_47, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3393 29 100.0 32 ............................. CCGGGCAAAACCACCGAAGGGAAAGAGACATG 3332 29 100.0 32 ............................. AACGTCGCTTGCTCTGCGGTCTCCGATGGGCA 3271 29 96.6 32 ............................T GCCTTCATGCAGGTGATCCGGTCCCGTGATGA 3210 29 100.0 32 ............................. ATTCCGCGCTCTTCCGGCTGGAAAGCTACCCC 3149 29 100.0 32 ............................. TAATCATGCACACCAGTGCGCGCCACCCTTGA 3088 29 100.0 32 ............................. GGGACTAACGGCTCTCTTATCCTCGATATGGA 3027 29 100.0 32 ............................. ATAACGTCTTTTGTTGCCAGTCTTCATCCTCC 2966 29 100.0 32 ............................. CTCATGGCGTGGGCGCGCTGGGATGGCATGAA 2905 29 100.0 32 ............................. GTTGATGGAAATAACCACAAGATCATTCAGGT 2844 29 100.0 32 ............................. TGGTGGGTGGCTCCGGTAGTGGCATCCAGTGG 2783 29 96.6 32 ............................T CAGGCCACCGTCAAACAGATATGGCTGATTGC 2722 29 100.0 32 ............................. ATCCAATCGGCGTTCGTACCATGAAGGCCGAG 2661 29 100.0 32 ............................. CGCCAGATCTATTGGTGCAGGCCAGGGCTTTC 2600 29 100.0 32 ............................. GCGGACGGTAAAGCCCTGCTGTCCGGTGACGT 2539 29 100.0 32 ............................. GGGCTTCCATCGGTAGGAATACGTTTCCAGTT 2478 29 100.0 32 ............................. TCTACCCGGCATCATATTGTGGTTGGTACGCC 2417 29 100.0 32 ............................. GGTTTTTGAGTAACTGGCATGGATAAACTCAC 2356 29 100.0 32 ............................. GTCAGAGATTGACCCGCCGCAACCGGAATGCC 2295 29 100.0 32 ............................. CCACTCGCCATCACGCATGACCTCAGACCCGA 2234 29 100.0 32 ............................. ACACCTGATCTGCAATAGCACGGAGAAGCCCC 2173 29 100.0 32 ............................. GCCTGTTTTTAGGTGTCTTTTGATGCTCACTC 2112 29 100.0 32 ............................. TAAAATATGTCATTTTGGGATCTGAGCGACGG 2051 29 100.0 32 ............................. AATATACCGGCAACGCTGTTTTTGATCGCAAA 1990 29 100.0 32 ............................. CCTGTTTCTTCAGCTGCCGGCCGGCCACTTTC 1929 29 100.0 32 ............................. CACTATGCCCTTGACGGAGTGATCGGCGGCAA 1868 29 100.0 32 ............................. CCACTTAGCATAATCAAACCATACAAGCGCAA 1807 29 100.0 32 ............................. ATGGATACATGGCAGCAAGCAAGGTGGGAGAG 1746 29 100.0 32 ............................. AACCATCGTTCATTTCAACGAACCAATCCCCA 1685 29 100.0 32 ............................. GCCGCTGCTGTTGCGAGGTGTTCACGCGGGTA 1624 29 100.0 32 ............................. TAAACCAATGGCTAAATACCTAGTAACATTTG 1563 29 100.0 32 ............................. GTTACGCGCGGATTGGACGCTGCCCCTATGGT 1502 29 100.0 32 ............................. ATGGGGCAATGCCAACAACGCTGGACAAGCAA 1441 29 100.0 32 ............................. AGCTTGAGTTTGTCCGGGCGCATACCGAGGCT 1380 29 100.0 32 ............................. CTGTTGACACAAATGAACCTTACCCGCATCAG 1319 29 100.0 32 ............................. CGCAATCTCATTCTGAATACCGCGCTGACGGA 1258 29 100.0 32 ............................. ACACATACTCTGGTAAATTTACCATTGCCCTG 1197 29 100.0 32 ............................. TACATTTCCAGTGACCACGGGGAAAAGATCGG 1136 29 100.0 32 ............................. CCTTGCCGCCGGTCTTGGCAATGGGAGCGCCC 1075 29 100.0 32 ............................. GTCTGGATTCAGGTTCTCACCGGATCGGCCCC 1014 29 100.0 32 ............................. CCGCCATCGGAAAGGCGTTGTAAAGAAAGGCC 953 29 100.0 32 ............................. TTAGTAGAGGTGGCAACAATATTGGTGCCCAT 892 29 100.0 32 ............................. CAGCTGACCACAAGCGAAGCGGCCCAACAGAA 831 29 100.0 32 ............................. CGGGGGGCGAACTGAGCGATGCGGACCAGCAA 770 29 100.0 32 ............................. GGTGCGACCTGAACCAGTTTCGGGATCGGCCA 709 29 86.2 0 ...................C.T....A.A | C,TCT [681,686] ========== ====== ====== ====== ============================= ================================ ================== 45 29 99.5 32 GCGTTCCCCGCCCACGCGGGGATGAACCG # Left flank : ATGCGTTCCGGCGCACCGGGCTGTTGGCGCAGATCATCCCGCGCATTGAAGAGGTGTTGCGCGCGGGCGACCTGCCCGTGCCCGATCCCCCCACCGAAGCCGCCGGGCCCGCCTTTCCCGACGATCCGGCCCCCGGCGATCAGGGGCATCACGGATGATTGTCGTCGTGGTCTCGAACGCGCCGCCCCGCCTGCGCGGACGCCTTGCCGCCTGGCTGCTTGAGGTGCGCGCGGGGGTCTATGTCGGCGCCTATTCGGCCCGGACCCGCACGATGATCTGGGATCAGGTCGAAGCCTATATCGACAGGGGCGATGCGGTGATGATCTGGAAAGCGCCCACCGATCAGGGGTATGACTTTAAAACCGTGGGCACAAACCGCCGGATGCCGGTGGATTTCGACGGCATGAAACTGGTCAGCTTTGCACCCCGAAAACCGTAAATTTCTCGGTACGTTCTTTGACATTAGAATATCTTTGGTAGAACAATCGCTTACAACAAGA # Right flank : TTTTATTGAGCCGCAATGACCCTCTCGCTGGACGGAGTCAGGCTGCGAGTTGCTGTTCGAGCCAGGTCATGGTCTCTGACATAACACATGGTCCGACACCGAAGGCGCGTTCGATCATGCGTTTTTCGCCGATGGGATCGCGGGTCAGGTTGAAGGCGCGGCCCTGGCCTTTTCGCAATGCGCGCATCACTTCAAATCCCTTGATCGTGGCGTAGGCGGTTTTCATCGTTTTGAAGCCCCGGACCGGCTTGATCAGCTGCTTGAGCTTACCGTGATCGGCCTCGATGACGTTGTTCAGATACTTGACCTGGCGGTGTTCGACGTCCTTTGGGCACTTGCCCTCTTTCTTCAATTCGCGGATCGCCTGGGTGTAGCATCCAGCCTTGTCGGTGTTGATTTTGGACGGTTTTTCCCAACCTTTGCAGGCACGAATAGCCTTGCCCAGAAAGCATTTGGCGGCTTTGGCATTGCGTGTCGAGGACAAATAAAAGTCGATCGTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTTCCCCGCCCACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCGTTCCCCGCACACGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //