Array 1 4105236-4107590 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIWZC010000001.1 Enterocloster clostridioformis strain FDAARGOS_1529 tig00000031_arrow_pilon, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 4105236 32 100.0 34 ................................ GCTCTGGTTGTAGGAGCGGAACTGGCCTGTGTAC 4105302 32 100.0 35 ................................ CTGTGAAGCCTGTCCTTCGGCTGTTTCCTGTCCGG 4105369 32 100.0 35 ................................ AACTCAATTAGATTCTTTTTTGGCTCTTCTATGTC 4105436 32 100.0 34 ................................ AGGATATGGAACGGCTTATGAAGGGGATGGATGC 4105502 32 100.0 35 ................................ CCCAAAGCCTCCAGGTAGGTATCATCCGTTTGGTC 4105569 32 100.0 35 ................................ ATCCGCTGCATCGCTGGCATTATTCAAGTCCTTCC 4105636 32 100.0 35 ................................ GTCCGCGCCAACACCCCGCAGCTGGCCATGATTGG 4105703 32 100.0 34 ................................ TGAAACTGCAATTTGACAGCCTTAAAGCCACAAT 4105769 32 100.0 33 ................................ CCGGCAGCAGGGCCACCTCCAGGTCCCCCTCAT 4105834 32 100.0 35 ................................ GTCACGTCAAATATGATAGGCATATCAGTATCCAC 4105901 32 100.0 35 ................................ CTGGCTCATTCCAAACCAACGCACACCGCGTAAAG 4105968 32 100.0 34 ................................ AGGCTATAGTTTAGCAGACATTGCCGCCGCTACA 4106034 32 100.0 34 ................................ CTTTGGGCGCAAAGGAGGAGCGTACTACAAAGGG 4106100 32 100.0 36 ................................ TGGGAGATAACAACCGTGAAACAGAAGTGGTATCCC 4106168 32 100.0 34 ................................ CGGGCATTAAATCATTTACCGACACTCCAAAATA 4106234 32 100.0 34 ................................ CAGTAGTACATTGATTATATTCATTCAGTGTTAT 4106300 32 100.0 38 ................................ TTTTCATCTGCTTCTAAATCCATACAAAGTCTTGCTCC 4106370 32 96.9 34 A............................... CGGTATCGATAGAATATAAATATGATTTTGAAAG 4106436 32 100.0 34 ................................ CTAAAAATAGGTATAAAAAATACAGCTCCGCAAA 4106502 32 100.0 33 ................................ ACCTCCCACTCCCGGAGCGGATGCTTAACCATA 4106567 32 100.0 35 ................................ TGTTGTCCTGCGGTTCCCAGGCTCATATGCTCGGC 4106634 32 100.0 34 ................................ TCTGATTACTACCCAAAAATGTGCAGCTCTCTGA 4106700 32 100.0 35 ................................ AAGATGTCTCTCTGCTTCTCGTCCGGTTTTGCCCG 4106767 32 100.0 33 ................................ ATCCTGCAACATCTCCTTTATGATTTCTCCCAG 4106832 32 100.0 34 ................................ ATTACCGCTTTCATCCCAGTCCCTCCTCAAAATG 4106898 32 100.0 33 ................................ GACATGGGCGAACTTGATACATCGGCCATGGAT 4106963 32 100.0 35 ................................ CATACCTATAACAATGATGTGCCCGTGGAGGATTA 4107030 32 100.0 37 ................................ AAGGACATAATACACCAGTAACCGGCGGTACTATTGT 4107099 32 100.0 33 ................................ CGATTCTCGCGCGCGTATACGCGCATGTGTATG 4107164 32 100.0 34 ................................ TCATTCGCAGCAATCCAGTCAATGATGAACTGAT 4107230 32 100.0 35 ................................ CGTGGTTGTCCACTTTGCGTCCGGAGTATATACCG 4107297 32 100.0 34 ................................ TTGGGGCAACAAAAGGAGCTGCCATCTTGTTTCC 4107363 32 100.0 33 ................................ CCGCAGTCTGCGATATGGGCGATTGTTTTATAA 4107428 32 100.0 33 ................................ AGCAGTTAAAGGCAGATAATGCACAGTTAACAG 4107493 32 100.0 34 ................................ TCCGGGGTAGTCTCATAGCCGTTCACATAATAGC 4107559 32 68.8 0 ......G.T......TC....CAAG..A...A | ========== ====== ====== ====== ================================ ====================================== ================== 36 32 99.0 34 GTCTCCACCCTCGCGGTGGAGTGGATTGAAAT # Left flank : GCTGGTACTGATTACATATGATGTGAATACGGAAACCGCCGCAGGCAGGGCCAGGTTGAGAAAGGTTGCAAAGCAATGTGTCAATTATGGCACCCGCGTCCAGAACTCCGTATTTGAATGTATTTTGGATAATGCCCAGCTGATAAAGCTAAAGGCGATACTGACAGATATAATTGATGAACAGACGGACAGCCTTAGGTTTTACAACCTTGGGAATAAACACACTACAAAAGTGAACCATGTTGGGATGAATAAGGGGATTAATGTGGAAGAACCGCTGATATTCTGACCTGGCCGCGGGCGGTAAAGCGGTATAAAGTATTTTGGTGCGAACCTGAAGCAAACATGGATTTACGGGGGGATTCGCACCGGAAAATTTGCACAATGAGAACGGATTTGCGAGTGTGCAGGGATGGTTGGCCGTGATTTGAGGGGGGTGGGATATGATTTGTTTGTGGAAATGTGATGAAGAATAGTAGTGGTTATTGTGTAGTATTTCT # Right flank : ATCCGCCAATTACAGAATTACATCCAGTTGCCCTCTCCTCTGCCCTTTTCGCAAACGCCGCAATCCCTTTTGAACTGCAAAAAGGTTAGGTAAAACTAATTCCGTACAACAAAAAAGATGGGGCATGCCCCATCCCTTTCATAATCTTGTTAGAATGTACAAAGAATGCATACTTCCATTATCCCTTCCATGCCCGAATCTCTTTAAGCCCCGGCACCAGCACCTTAGCGCTGGTTTCCAGAATGATCCGTCCCTTTTCAGCTGTGGCGCCTGAGGGGTCCCCGCCGATTCCGATGGGTTTGCCGTCTTCTGTTTTCCAATCCTCGGATACCCAGCCAATGGATACATTTCCGTAAGGTTTCAGCGCCTGATTGTCTTTAAATGCAGTGGGAATTCCCGCCTCTGAGGTCTCTGACTTTACCAGGGACGGGTCCACGGCCATGACCATGGAGGTTTCCATTTCACCTCCATGGAAGTCCCAGATATTTCCTTCTGAAATC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCACCCTCGCGGTGGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTCCACCCTCGCGGTGGAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.40,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 4982621-4985947 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIWZC010000001.1 Enterocloster clostridioformis strain FDAARGOS_1529 tig00000031_arrow_pilon, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 4982621 33 100.0 34 ................................. CAGATGTCCCATCCACACCCATATCTGCATCCGA 4982688 33 100.0 34 ................................. AATTAGGAGGTAAATGTACATGAGTGATATAAAT 4982755 33 100.0 34 ................................. CCGTATATGCTCACTCACTGTCATTTTTTCCCTC 4982822 33 100.0 33 ................................. GCGTATACGGTAAATGCAGCCCGTATAATCCAC 4982888 33 100.0 34 ................................. CGTGTCTATCACAGGAATTTTCTTTTGCTGGGAA 4982955 33 100.0 35 ................................. AAGTCCTTTTGGACGATTTATAATTGTAATATGCA 4983023 33 100.0 33 ................................. TCAAATCCTATAACTCAAGTTATTCGGCAAGTC 4983089 33 100.0 34 ................................. CCGTTTTCTCACCTGCTGTAGAAATCAAGAGAAT 4983156 33 100.0 35 ................................. TCCTCCGCGTTCATTGATGTGCGTCCATCCTCCCT 4983224 33 100.0 34 ................................. CTCTGCGACTGAGCAATCAGGGTCACAAGGCATC 4983291 33 100.0 35 ................................. CCTTGACTGTGGAATAATTGCCTCCAACCTCTTTG 4983359 33 100.0 36 ................................. GGCGCAATGGCCAAGGCTTTTGGATTTGGTGAACAG 4983428 33 100.0 35 ................................. CCTGACCTACAACCGGATTGTAGGCCGGGGATTTT 4983496 33 100.0 34 ................................. CTGCCCTTACATTATGGCAAGGGCATAAAAGAAT 4983563 33 100.0 35 ................................. TGGAACATCGGGTTGTATACGCCGTAGGTATCATC 4983631 33 100.0 34 ................................. CTTGTCCCAGCACCTCCAGGAACGCCAGGAAGAT 4983698 33 100.0 34 ................................. AACGTGAACCGGGGGTATCTGATGATAGTGGACG 4983765 33 100.0 35 ................................. TACCGCCAGCACGGTTCCGGCCGGGCTGCTTCCTG 4983833 33 100.0 34 ................................. AGCTGGTCCGCCGCCTCCTGGGCCTTTCGCACCA 4983900 33 100.0 34 ................................. GCCGGCATCGTGGCAGCGGAGGCGGTAAAACGCG 4983967 33 100.0 34 ................................. CGGAAACAGGTTTGCAAGTGCCCGGGTGAATCCC 4984034 33 100.0 34 ................................. TTTAAACAGATGATGGAGCCTGTCCTGGAACTGG 4984101 33 100.0 33 ................................. ATCTGGGACCGCATGACACTCAGACAGATTATG 4984167 33 100.0 35 ................................. CAGATTGCAGGATTGGTAGTCAGAAACTGTGGCTC 4984235 33 100.0 34 ................................. TCCCTACGAACCCGGTATAGGTTGTCCTCATACT 4984302 33 100.0 35 ................................. GTTTATAATACAATTAAAAGGCGGCAGGACTTTTC 4984370 33 100.0 34 ................................. CATTGAAGCAATTAAAGACCACGGCTATGAAAAT 4984437 33 100.0 33 ................................. CGACCGGCAGATAATCAACCGCATCCGTGAGTG 4984503 33 100.0 34 ................................. ATTCGGGGGATGATGCGGTATTTGTTGGAGTAAT 4984570 33 100.0 34 ................................. AAATTTGTTCCAACCGACCTTGACATATTCGAGC 4984637 33 100.0 35 ................................. ATGGAAATTGGGGACGGATTGTTTTCTCAGGTCCT 4984705 33 100.0 34 ................................. CTCGTCTGTGATTGTCCGTACATCCAGCATATCA 4984772 33 100.0 33 ................................. ACAGAAGATATTAGATAGATTTATCATTAAGTA 4984838 33 100.0 34 ................................. AGTTAGATAAAGAGGGAAAAAATGACAGTGAGTG 4984905 33 100.0 34 ................................. ACTGGGAAAGGCCGTGAAGGCAGGGTTCCAGGGG 4984972 33 100.0 36 ................................. TCCAATTCTCCCGGAAATGCTAATTTCCTGTTTCTG 4985041 33 100.0 34 ................................. TGCTTGGATAGCAAGTAGGATTTCCGGTCAAGCA 4985108 33 100.0 34 ................................. TATATGATGTAACTATGTTTTCTGCTTTTGCGTC 4985175 33 100.0 34 ................................. CCTATGCCAGCTGTGCAGCCGGTCATTGTATAAG 4985242 33 100.0 33 ................................. ATTGATAACTTATTACACATAAATCAGATAAAT 4985308 33 100.0 34 ................................. CCCATGCCAATTGTGTCTACATGATGTATTTCAC 4985375 33 100.0 35 ................................. GCGGGAATGTCGGTTGACCAGTACCGGACCATGAT 4985443 33 100.0 33 ................................. TCTTATACTCATAATAGATTTCCTCCATGGTAT 4985509 33 100.0 35 ................................. CAGTAGGTGTATACTGGCTATAATCGCCACATAAC 4985577 33 100.0 34 ................................. CACAAAAAATAGGCTGGAAGAGCTTGAGGACGAA 4985644 33 100.0 34 ................................. TCGATGATGGACAGCAACTCATTGAGTAAGTACC 4985711 33 100.0 35 ................................. TGTTGCTGCAGGTAAAAAAATGAACGGCGTTATAG 4985779 33 100.0 34 ................................. TCTTTTCTCACCGGACAATATCATGTCAAACCAC 4985846 33 100.0 36 ................................. CACCATGGTCTGTCCGGGGAGTTGAACCCCGCCCTG 4985915 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 50 33 100.0 34 GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT # Left flank : AAGTCCTGGAATTTCCGGAGAAATGTGGATTTCTGGCAGTGGCCGGAACAGCGGTGGCCCTGAAAGCGGGAAATCTGGCAGCTGTAATGGAACGCCAGGGCAGGGTACTGCGCATTTACGATGTCAATGATATGAAGGAAGTGATGGCGGAATTTGTCCGTGCGTTCAAGCAGGGAGCTATATATCCGGAACAAAAGAGGCTTGTTTTGAAAGAGTATCCGGCGGAGGCGGCAGAGGCACTGCAGCATGCGGGATATATGCGTGAAATGAAGGATTATGTAGTGTATAAGTAGAGTGTGATTTCTGTGAGGCGGAATCCCATCAAACCAGGTGCGAATGCCAAGCTAACATGAAATGCCTGGGAGATTCGCACCTGAAAAACAGCGGAAAAGCCGTGAAAATAGGCTGGGTGAATGGATGGAGGAGGTTGAAATAAGGAGGGGAGGACATAATGCATAAAAAGTTAGGGGGATGTGGAGGGATTGTTGGATAGTTTTGCT # Right flank : TATAACATGCTTTATATACATATGCTTTTCCTTTCCACCACTGCTGGATATGTGGTTTATTTTAGCTGGCTGATTTCGTGATAGGCTTCCAGAATACCATTTTTGGCTGCTTTTTATACAGTATCAATATCAACCCAATACCAACACTCACCCAATACCACCCCAATACTAACACCAATTCTTAATCATGCAGAACCATTAGGCAATTGCGAAACTCACTGACCAGAATTTATGCACATCGTATAGGAATGAATCTAAATTGAATATATTAAGCAAGATATTTTGTGCAAGGTGAATATAAAAATTCAGAGTTTCGTAATTACCTAATGCAGAACCATTTATGAAAGGAGAGGGAAAAGCCATGAAACAGATGTCATTATTCGATGACAGAGAAGTATACAATCCCCTGGCCAGCAGGCTGCGTCCGGATGACCTGGATGGATTTGTGGGACAGGAGCATCTTTTGGGAAAGGGGAAGCTGCTGCGCCAGCTCATAGAGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGAGGCCCGCGAGGGCCTTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.00,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //