Array 1 1518819-1517235 **** Predicted by CRISPRDetect 2.4 *** >NC_014414.1 Parvularcula bermudensis HTCC2503, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================== ================== 1518818 31 100.0 33 ............................... ACGGGCCGCCGTCCAGTGTCCACAACAACGCGG 1518754 31 100.0 35 ............................... GACCCTTTCCACCGCGCGATTTTTTCTCCCATAAT 1518688 31 100.0 33 ............................... ATGCCACCGCTCGCCGAGTGGGTCTATCTGCAA 1518624 31 100.0 33 ............................... CCCGGCAACGTGCAGCTGGTGTTACCCCTTGCG 1518560 31 100.0 34 ............................... AGGCCACAGAAGAAAGGGAAGGCCAATGATTGAG 1518495 31 100.0 35 ............................... TGCCCAATGGTGATGAGCTTGAGGCCCACGGCCCG 1518429 31 100.0 33 ............................... CGCCGACGGACAGGTTTTGATCGCCTCGGCCAG 1518365 31 100.0 35 ............................... CCAACGCCGGATGGTTCGCGGGTCTGTGTTAAGAA 1518299 31 100.0 34 ............................... GAAGACTGGGAAGACGCTGAGGGCGAGAGCGATG 1518234 31 100.0 34 ............................... CGTATAAATACTCACAGGCTTCCCCCATCGAAAC 1518169 31 100.0 34 ............................... CCTGATCTGTCGTGGTGCGCAATTCATTTTGCTT 1518104 31 100.0 33 ............................... TGCCGCCGTCGTTTCGGCTCAACGATCTCAATA 1518040 31 100.0 33 ............................... TTGACGACCCCGCATCCAGCGTTCTGTTGCGGT 1517976 31 100.0 34 ............................... CGTCTCACGCTCACCGTCGCGCCGGTTGTCCCTT 1517911 31 100.0 34 ............................... GTGGTAAGCGGTGATCGCCCGCTTGCCCCATCCC 1517846 31 100.0 33 ............................... CTGCATAAGCTGGACGGCCCCCGCGTAGTTGGG 1517782 31 100.0 34 ............................... ATTGCCCTCGACAAAAATAGCATAGGGCCAATGG 1517717 31 100.0 33 ............................... ACATCTGGCGAGGCATCCGGCTCTGCCGTGCCC 1517653 31 100.0 33 ............................... AGCGCGGTGATAAATTCATCGGCGACCTCAAGA 1517589 31 100.0 35 ............................... CCCCTGTAGCGGGCCGTGGGCCTCAAGCTCATCAC 1517523 31 100.0 33 ............................... TTGTGGTGCGGCTGGACGGGCCACGACCTGCGC 1517459 31 100.0 34 ............................... TGGCAACACCTGATTGACAAGGGTCACATCAGCG 1517394 31 100.0 34 ............................... CATCATAGCGCACGGCGGAGGAGCCCAGGGAATC 1517329 31 100.0 33 ............................... CAATGCCGGTCATCATAAACGCACTTCGCAAAA 1517265 31 93.5 0 ............................C.T | ========== ====== ====== ====== =============================== =================================== ================== 25 31 99.7 34 GTCGCCCCCTCACAGGGGCGTGGATCGAAAC # Left flank : CCTTCATCTGGAGATAGACCATGCTGATGCTGGTGACATATGATGTAAGTACGTCTTCCCCCGGAGGAAGCCGACGCCTTCGCCGGGTTGCCCGCGCATGTCTGGATTTCGGCCAGCGTGTGCAAAATTCGGTCTTTGAGTGTGAGGTTGACCCGGCCCAATGGGTGGCGCTTCGGGCACGGCTCATCGCCGAGATCGACGAGAAAGAAGACAGTCTCCGCTTTTATCGATTGGGGGCAGAAGGCAAGCGCCGGATTGAGCATATCGGCGCCAAGCCGGTTCTTGATCTTGATGGTCCCCTGCTGTTCTGAACGGCATTGGCGCGCGAACCCCATATTGTTGGCCATCCATCGGCAGGTTCGCGATTCCCTTAAATTATTGAATTATAATATAATTTTTCATTTTCTGGCAACAATCGCCCCTATCGCAATGGCAGATCCACCACAATCGCGGATCATCCACATTTTCCTCATCTACTACAGGATGTTACGTACCCCACG # Right flank : GAGAGAGCGCTGGCCGCCAAGCAGGAAGAGCCCCGGCCGGCGCCCTTCCCCTATGCCTGCCGCCCTCAGGCGCGGCGCAAGCGTTCGTAGAGAATCTGCGTTTCGAGAAGATTGGCGATCCTGAGGCCGATTTCGACCACATCGAACGGCTTCACGACGAAATCCTTTGCCCCGAGAGAAAGGGCCCGGCGCCGTGACTGCACAGTGGTATCGGCCGTCAGGACCAGGACCGGCAGGAATTCATCCGGCCGCGCATGACGGCGAAAGGAGTCGAGCAACTGGTAGCCGTCCACATCGGGCATCATCAGATCAAGGAGGACGATATGAGGCTCAAGGTCGAGATATCGATTAAGCGCAACCGACGGCTCCCCCACGAAATGGCAGTCGCGGTAGCCCTCCCGCTCCAACAGGGTTGAGAGCAATAAGAGGTTCGCCTCTTCATCGTCGATGACGAGAACGCGGCGTGAGAGGATCTCCTCAGGCTTTACAAAGTCATTCAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCTCACAGGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTCACGGGGACGTGGATCGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.20,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //