Array 1 37273-38203 **** Predicted by CRISPRDetect 2.4 *** >NZ_AVFF01000022.1 Corynebacterium pseudodiphtheriticum 090104 isolate Sokolov C_pseudodiphteriticum_090104_Contig_22, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================ ================== 37273 36 100.0 28 .................................... ACCTACCACGGCACGCGAAGTCACTGTG 37337 36 100.0 28 .................................... AAAAGTATCTGGTTTGTGTCGTGCGACA 37401 36 100.0 28 .................................... CGAGCATGGAAATAGACACCGGCGGTTT 37465 36 100.0 28 .................................... ACCTACCACGGCACGCGAAGTCACTGTG 37529 36 100.0 28 .................................... GCATACGCTAGCGGTTTTGATTCCGGAT 37593 36 100.0 28 .................................... TCGAAGCGGTTTGATTCATCACGCAAGT 37657 36 100.0 28 .................................... CAATCAACATGCTCAACGAAATCAGAGA 37721 36 100.0 28 .................................... TTGCGAATGGTTGGTAGCACCTCGTGAG 37785 36 100.0 28 .................................... TTTGCGCAAATTGAATGTTGCATGATGG 37849 36 100.0 28 .................................... ATCAGTCAGCGCCTTAGTGGCATCGATC 37913 36 100.0 28 .................................... ATTCACCGTTCTTGTTGTCGCCGCCGAT 37977 36 100.0 28 .................................... GCCAGGCAGCACACCACCAGAGTGATAG 38041 36 100.0 28 .................................... ATCGTCGGCTGCTTCCAGGCTTGTGAGT 38105 36 100.0 28 .................................... CTGCCGCGTTTGAGCACTGGTGGTCTGC 38169 35 97.2 0 ...................................- | ========== ====== ====== ====== ==================================== ============================ ================== 15 36 99.8 28 GCTGGGGTTCAGTTCTCATTACCCCTGATATACTTC # Left flank : CAAGGAAGCGAAAAACGCACGGTAGGCCTCGTCGGTGGAGTTATGGAAAAACTCCAGGATCTGTGATCCCAACTGGAACTGATCCCAGCGTGGCCCAATCGAACTACCGGGAAGAGCAGGTGCGGAAGAAGCAAGATTCACTACGGCACCAGAGCGCGCCGAATTGCTGGAACCCGCAGGATTAGCGTGTGCCTCGATCGGAGACGAAAACAAGCTCGCAATGATGGTGAACGAGCCGAAAATTACGGCGAGTTTCTTCACGTCTGGTGCCTTCCGGAAATTAAGGGAGTGGTTGGTGAACTGACTATAACAAGTTGCGGAAGTTATAGAAGTGAAAGAAACCCACTACTGGTGCATTGAAGAAGTTTTAGATGTAAATAGTCGGTAGATCTGACTTTTGGGTTTTGAAGCGGGGGCCGAATTGTATTTTTAAAATTTTCGTGATGAGCGGGATTTACAACCTTGACATGCCGCGACCTGCGGTATGAGAAATAATTTCC # Right flank : | # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGGGGTTCAGTTCTCATTACCCCTGATATACTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.20,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA // Array 1 23044-23335 **** Predicted by CRISPRDetect 2.4 *** >NZ_AVFF01000025.1 Corynebacterium pseudodiphtheriticum 090104 isolate Sokolov C_pseudodiphteriticum_090104_Contig_25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================ ================== 23044 36 100.0 28 .................................... TCGTGTGATGACACCTCAAGAGATAGCG 23108 36 100.0 28 .................................... AGCGGGTTTGTCTTTCATGGCTTTTGTT 23172 36 100.0 28 .................................... AGACGAGTTCGCCGTCGTCACCCTCGTG 23236 36 100.0 28 .................................... TTACACCCTCTAGGTGTTGCCGCGATAC 23300 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================ ================== 5 36 100.0 28 GAAGTATATCAGGGGTAATGAGAACTGAACCCCAGC # Left flank : CTTTTGCTAGTGACGGAAAGAGTCTGAGCACTGCCTTTAACGAATTCGCTCAACACTATGGGCAATACGTTGAAGGTAGGTTCCCGGACCTCAGTGTTCCTCGGTGGGAAGGATTCCTCCGTGCCCACGAAGGATAGCGAACCAATGTGGTGTGTAGTCATGTTTGACTTACCAGTCAAGACCAAAAAGCAAACCAGGGAAGCTAATCGCTTCCGCAATCATTTATTGGACCTTGGCTTTTGCCGCTCGCAACTGAGTGTTTATGTGCAGTATTTTCCTCTCGCCTCACGGATTGCAAAAACAGTCAAAGAGATAAAAACTAATTTGCCAGACGGCGGCGAAGTGAGAATAGTCTCAGTCACCGATAACCAATGGGCAAAAGCCATCAGATTTTCGAAACACCAGGAAGACACAGTTGAGGAAAAACCAACACAACTACTAATTTTTTAATGAGGAATCGCCAAATAACCCCAGTAAAACGGTCCTTTTCGGGCCGCACT # Right flank : GCAGACCACCAGCGCTCAAACGCGGCAGGAAGTA # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAGTATATCAGGGGTAATGAGAACTGAACCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.70,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [56.7-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA //