Array 1 69073-67946 **** Predicted by CRISPRDetect 2.4 *** >NZ_NIHI01000066.1 Escherichia coli strain ICBEc03 Contig_69, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 69072 29 100.0 32 ............................. AAATTAATTTCGAAACGGGCGTTGATGGTGAA 69011 29 100.0 32 ............................. GCTGGCGCACCTTACGCAAAAATAGACGTAAA 68950 29 100.0 32 ............................. CCAGGGAGCGAAGCTGTGGCCATGCTGAAAGG 68889 29 100.0 32 ............................. GGGTTCTATTTCCTCGGGATTTGCCGACACGC 68828 29 100.0 32 ............................. GTCAACGCTGGTCAGGCGTGGTACTTCCTCCG 68767 29 100.0 32 ............................. GCTGCCGCGCTTTCGGTGTGGGAGCAGTATGA 68706 29 100.0 32 ............................. AAACTCCGTGGTGTAGTGCGTTTGTTGGTGCG 68645 29 100.0 32 ............................. TTGGTATTAACGGGAATGTAGTCACTCCAGGA 68584 29 100.0 32 ............................. GCGATCGTATTTTCCGCTACGTCGCTCAAATG 68523 29 100.0 32 ............................. TCGTTGATGGTGTGATGAGTGTACAAAAAAAA 68462 29 100.0 32 ............................. ACGACTGAATCCGGCGAGGCTATCAACTGGCC 68401 29 100.0 32 ............................. CCGCACACGTCGAGCTGGTGGGGATTAATGCT 68340 29 100.0 32 ............................. CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA 68279 29 96.6 32 ............................C TCTGTGTATTCGCTACCAGCCAGCACCGGTAC 68218 29 100.0 32 ............................. CAGGGTAACTGGCTGCTCCTCAACCATTCCGC 68157 29 96.6 32 ........C.................... GGGTTTTAGCGACCGGACCAGAGTACGCAACA 68096 29 96.6 32 ........C.................... TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT 68035 29 96.6 32 ........C.................... GGAGTGATGAATTGGAAGTAACGGATAACCGC 67974 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 19 29 99.3 32 GTGTTCCCTGCGCCAGCGGGGATAAACCG # Left flank : AAATTAATTCCGTTAATTGAGGAAGTCCTTGCCGCCGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCACCAGCTATCCCGGAACCTGAATTGCTAGGTGATAGTGGTCACCGGGGGCGCAGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTTGCAATCTGGCTCCTGGAAGTACGTGCCGGTGTTTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCCCAACTGGCAGGTTGCGGAAATGTGGTCATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAGAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAAAGTTTGAATTTAGTTGGTAGATTGTTGTTGTGGAATAAAATCAGC # Right flank : GACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAAC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-11.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //