Array 1 3465295-3463277 **** Predicted by CRISPRDetect 2.4 *** >NC_012997.1 Teredinibacter turnerae T7901, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 3465294 32 100.0 33 ................................ GTCGTTTGCGTATCGCGGTTTTAATGACGTGGG 3465229 32 100.0 34 ................................ TTCAATAACTGCGTCGGCTATGGCCTCAATAAGT 3465163 32 100.0 34 ................................ ATCAAGTGAGCGCATAATCTGTATACGCACTTTT 3465097 32 100.0 34 ................................ TATGTGCAAAGATGGTGATGGCAAAATATCTATT 3465031 32 100.0 33 ................................ CCGCATCCCATAGCGCCAAGCCTTTGTATTATC 3464966 32 96.9 36 ........T....................... CCGGATTTTGCTCAACGGAGCATCACAAGATCTGAG 3464898 32 100.0 34 ................................ TCCGTCCGCATATGCGGCGTTAGCGCGAGCGATT 3464832 32 100.0 34 ................................ AATTATGATTTATGGCGGTTAAGCGCCACCCGTT 3464766 32 100.0 34 ................................ AGTTTCACACCAAGGGCACCGGTGCAAGCTACGA 3464700 32 100.0 34 ................................ TGATGGTCGTGTTGTTGGCGCCCAATGCTTTAAC 3464634 32 100.0 34 ................................ TCGCGCTACGGCCCCAGCTGATACCGCTGCGGCT 3464568 32 100.0 35 ................................ GCGAATACGAAATAACCGGCTATACGGCAGAGCAG 3464501 32 100.0 35 ................................ ATTGATAGCAATTGGACTGATAACTCGCCTGGCGA 3464434 32 100.0 35 ................................ AGGGTCGAGGCCGAGCATTATCATGTTGTCAATGA 3464367 32 100.0 34 ................................ CCATTTAGACGGGACCGGGATAAACCCGCCTATC 3464301 32 100.0 34 ................................ GTGCTGCAGCCCGCATTTTGAAAAACTACGGCAA 3464235 32 100.0 35 ................................ CCATTGCGGCAGAATTGCAGGCGCAAGCATTGGAG 3464168 32 100.0 34 ................................ GATACGCATGTGAATTATGCAACGCTGGACGCTT 3464102 32 100.0 34 ................................ GTTGTGTGGGATTGGCTGAACATGCAGCTCCAAC 3464036 32 100.0 34 ................................ TGGTTCGACCTCTTCGGGTTCAGCTTTCGCCTTT 3463970 32 100.0 35 ................................ GACATCAGGGCTTGCTAGATCAGCTAAAAGCCAAG 3463903 32 100.0 34 ................................ CCGGTGTTGGTGATTTATGACCCCGGCTTTTGAA 3463837 32 100.0 34 ................................ ATGATGTACCCCCGGTACCCACTCAACAGAAAAA 3463771 32 96.9 34 ...................G............ TTCTCGAATAATGGGTTTTGATAGTGTTACTTTT 3463705 32 100.0 34 ................................ GTGAGCGGGTACGCTATTTTTTGTACTCATGGGT 3463639 32 100.0 33 ................................ TCGGCCTCGTCAAGCAGCTTCTGTATCTGTGCT 3463574 32 100.0 34 ................................ GGCGACGGATGAAGGGTTAGGTGTGGTTAACATA 3463508 32 100.0 34 ................................ ATTACATGGGCCAAAACAACAGATTCAAATCGCC 3463442 32 100.0 35 ................................ TTGTAGGCGTCCCAGGGCCTTTGCTCGTGCGGTAA 3463375 32 100.0 35 ................................ GAATATCGCCTCGTAGATTACGTCCACCGGCCAAC 3463308 32 81.2 0 ........................GGGAG.G. | ========== ====== ====== ====== ================================ ==================================== ================== 31 32 99.2 34 TTCGCGCTCCTCGCGAGCGCGTGGATTGAAAC # Left flank : TTGTATATCGTTAAACGGACATACTTCGATGATGGTTCTTATTACATATGATGTGAGTACGGAAGGTAATAATCCGCAGAAAAGATTGCGCCAAATTGCAAATGCGTGCCTGGATTGCGGGGTGCGGGTGCAATACTCGGTTTTTGAGTGCGAGGTAACCCCCGACCGCTGGGTACAGCTACAAGCGCAATTGTTTGACATTTACGACTCATCGGTGGATAGCTTGCGGTTCTACAAGTTAGGCAAAAATTGGCGGGACAGGGTAGAGCACCACGGAGCAAAGCCAGCGCTGGATATATATCAGGACACGCTGATTCTATAAAAACGCTAACCACCAGTTCTCATTAAAACCCCGATAGGTTAGCGACTGTTATTTTCTATTTAATTTCAATGGGTTACTCAAGATTCGTCTTCAGTTAAAGGAAATTATTGTCAATTTTAGGGAGGTTAGCGAATATCACAATTGAAAGCCCCGGTATTAAAGGCTTTCAGAAGCTACT # Right flank : CGGATTTTTCACAGTAACTCAATACGATTTTGATCTGCATGCCCATAGATAGCACACTTAGTGGAGCTTCGGGGTGAAGCTGCTCGAAGCTGAAAAATTTTATCGCTGTTTTTATTGGTGCGCCGATAAAACTTTAAAAAATAAAAATATTCACTTTGATTGCGTTGAGGCGTTTTGCGCTCATACTATAGTTGCGCGTTATTTTGATTATGGGTTTAGCTGTCGCTTTTTGTGTTAGCGACATCTTCGATTCCCCCAACTCCCCCAAAATTTCATCAGCACCCGTCTAATGTAAAAAAATTCGCCACTCCAAATTCAAAAAATCGCAATAAATTTTAACCGTTTCGTCACTTGTTAGAATCCATCTTGCGCCGATTTTTTCTGTTTTGGTGCAATCGCCAGTTTGTTTGTTTTTTTCTCCCCTTGGTGGTGCGTCGGGCTATATTTGTTCGATATTTTTAATGGAATAGAGTCAATCGATAGTTGGTGGTGTACAACTA # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCGCGCTCCTCGCGAGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCTCGCGGGCGCGTGGATCGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.80,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 4836554-4834731 **** Predicted by CRISPRDetect 2.4 *** >NC_012997.1 Teredinibacter turnerae T7901, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 4836553 37 100.0 34 ..................................... ACGTTGTTTGTTGAGGGCTTGATATGGCTAGAAA 4836482 37 100.0 34 ..................................... GGTTTCGGCTGTATACACATCCACACGGGAGCCC 4836411 37 100.0 34 ..................................... GCCGTAGCGAAATCGCTATCGGTTTTAAGGTCTG 4836340 37 100.0 34 ..................................... CACACCCAACCCCGCGATGGCTTCATCGGCATCG 4836269 37 100.0 34 ..................................... GTCCTCGTTTTTGGGGGCGGTGGGTATTACAGCT 4836198 37 100.0 36 ..................................... TGGGCGCTCGTGATGCCCACACACATCAAGTTCATG 4836125 37 100.0 35 ..................................... TGGATATACAAAGAGTAAATATTAATCAAATGGCT 4836053 37 100.0 35 ..................................... CTCGTTAGCCTTAACCACTTCCGCCGCTGCTTGCT 4835981 37 100.0 34 ..................................... GCTGCGCTCTGAAGATGGGCGGATGTCTACAGTG 4835910 37 100.0 35 ..................................... TCTTTAACTTCGGCTGCGAGTTCCGGGCTTATGGG 4835838 37 100.0 35 ..................................... CTTACAAAATCTTCTGGTTCTCTCGCCTCATCAGT 4835766 37 100.0 33 ..................................... ACTAACTTATCGTGGCTCTCCTGATACTCGCTA 4835696 37 100.0 35 ..................................... ATGTGAAACCGGTTAAGCGTTATAAGCCAGTGATG 4835624 37 100.0 34 ..................................... TCGCTCGGGCGGGACAACAAGAAATGCCGGAGAT 4835553 37 91.9 35 .........A...CT...................... AAAATAAACGCATTCATTTCTGACAGCACGCTTTC 4835481 37 91.9 35 .........A...CT...................... GCGAAATCGTCGTCTGAATATTCGTCTCTAAGCTC 4835409 37 91.9 34 .........A...CT...................... GCTCCTTCTCTCTAGTCTTAATCAGGCTGAGAGC 4835338 37 97.3 36 .........A........................... GTTCGGCTTGCGGTGTAGCACGCGATCCAGCGAGGG 4835265 37 89.2 34 .........A...CT......T............... AATAGTTACTGTTGCGGGCGGGGTGCGGCTTAAA 4835194 37 91.9 33 .........A...CT...................... CTGCTCGCTTAACTGCTGATCCTGAATATTCTT 4835124 37 100.0 34 ..................................... TACAAAAAGTAGAAAAAAATCGGTTTTACCTCTC 4835053 37 91.9 36 ...C.A...A........................... CCGGCTGTGTGTAGTCCAGTTTCCCGCAGTGGGGGC 4834980 37 100.0 34 ..................................... CTGCAGCAATGCCACTGCTTTGTTTATGATTACT 4834909 37 91.9 34 .........A...CT...................... TGCAGTTTTGCACGCATCGGTTGAAATACTCGTA 4834838 37 97.3 34 .........A........................... CGTTAATCGAGTGCAGCTGGCTGGTAGTTCATCC 4834767 37 83.8 0 .....A...A..ACT.................A.... | ========== ====== ====== ====== ===================================== ==================================== ================== 26 37 96.9 34 GCGTCGCTGGAGGTCTAGCCGCTAAGGCTGTTGAAAC # Left flank : GTAGCGCGAATAAAAAACAGGCCGAAGCGAACTGCGGCACAGGGGGGTTAATACTAAAAAGTACAATACAAGTTAACCGGTAAATTGCGTAAGCCGCTATTATTATAAACCGGTGCAAAAGGTTTTAATGTTTGGGGTTTTCACCTCGCAATGGTTGCAGCGCCTTCAGGCAGGTTGTAAAAATAGCAGGCAATAAAAAAAGGCGAACAAATAGCAGCAAACAAAGAACGGGTAGCAAAAACAGGCGGTTTTTCGCTAACCTCTGGTGCTGTTTGGGGCCTTGTAGTGCATAGCGTAAAAAAAGCCCGGTTAAAACAACGGGTTAGCACCGGTTTGCGGGCTATTTTTAAGAAGTTGGTTAGCGAGCCGTTAAAAATCAAAGAGTTAGTGTGGATATGGCACAAATTATCGGTATACTCGATACGCGACTATCAGGAAAAAGCGGGGTTAGCGAATATTGCACTTGCAAGCCGCTACCCGCAAGGGCGCCAGCACCCGGC # Right flank : CCGATTCCGACAGCGAATGCCATGATTGATTGACCTTGCGGTTGTGGGGCTGGTAATTTTAGGCCGGTGGCCCGGTGCGGTTGTGGCCCTAAACCCCAAGGATATTTTTCGACATGGAGAGCAGATGCATGCGCGATTCGCTGCTGCCGTTACAGCACTTACTGCCGTTGCGCAGTGTGGTGGTTTGCTTGCAGTGTGTAACCGCGTGCGAGTTAAGTTTTTTCCATCAGCCCGCCATGAGCGCATTCCTGCGCAATCTACTGGACCACCCGGATCAGTTCGATCAGTTCCTGCTTGCCGATACGCCCGAAAGCGGCCGTCTCTTTTATAACGAAGGTGATTTTTACCGATTTACCGTGGTTGCACTGGCCGGTGGTGAGGTGCTGTTAGCGCGCCTGCTGGCCCGTTTGCGCAATTTACCTGCGGCGGCAGTTGCAGCCAGGTGCAGCGGCGCGTTTGCCGATAATTGGCGTTGGGCAGGCTTTAGTGATGGCTTTAAC # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTCGCTGGAGGTCTAGCCGCTAAGGCTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.80,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [21-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,0.78 Confidence: LOW] # Array family : NA //