Array 1 80011-78300 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADWNN010000002.1 Acinetobacter bereziniae strain ACIN00242 ACIN00242_c0002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 80010 28 100.0 32 ............................ TGTATTGGAGCACGTGAGTAATCAAAAGGACG 79950 28 100.0 32 ............................ TTTGATTTTTTGAAAGTTGTCAGCAGTACCCC 79890 28 100.0 32 ............................ AGTACCGTGTGAATGCGAGTTTGAATTCTTTA 79830 28 100.0 32 ............................ TTTAGTTAAAAATAATTTAGATGAATTTTGAG 79770 28 100.0 33 ............................ TTTTTAAAAGGTTAAGATGTACGAAATTAACTT 79709 28 100.0 32 ............................ TTTATTCATTCCGTTCTCAGGTGTGAATTCGC 79649 28 100.0 32 ............................ ATCCAGCTCGATGTCGATTACAAATGTCGTGA 79589 28 100.0 32 ............................ GAAACATGAAACGTGGGTATAACAATGAAACC 79529 28 100.0 33 ............................ TCTTAATTAATACGGCTTAATAAAATTTCCCAA 79468 28 100.0 32 ............................ GCAGCGTGGACAGATGTCGGGGGTCAGTCTCC 79408 28 100.0 32 ............................ AACCAATGAAAACCCCGAGACAAATAGCAACG 79348 28 100.0 32 ............................ ACAGTATGGTTGAACTCGTTGGCTACGGTGAA 79288 28 100.0 32 ............................ GCTTGAAATCATCACCTCGCGAACGTTATCCG 79228 28 100.0 32 ............................ AACCCCGATTAAACGCCCCCATTCGATTAACG 79168 28 100.0 32 ............................ GTGACGGGTTAGAATCTTCGGTCTATCTGAGT 79108 28 100.0 32 ............................ GCCCTGAGATCGTAAAGTTAAACTAATATCCT 79048 28 100.0 32 ............................ TTAGCTGTATTGGACCAGTTAATTCCTGTTTG 78988 28 100.0 32 ............................ TGAAGGGTTTGTTTTTGTGCCGAAAGAATTGA 78928 28 100.0 32 ............................ TCAACGCACCCATGCGGTGTGGTACGGTCGAC 78868 28 100.0 33 ............................ TGTTTGTGTTCCAGTGTCAGGGTCAGTTTTATT 78807 28 100.0 32 ............................ GACAGTCCAGTTAATAAGACGAATATCAGACA 78747 28 100.0 32 ............................ ATTGTGCGGGGGTGGACCTTGTACTTAATTGA 78687 28 100.0 32 ............................ TTGAACGGTATAGATCGCAATAAATCCAGATT 78627 28 100.0 32 ............................ TTGCCAGTCCCAACGAATTAGATAATTCCAAT 78567 28 100.0 32 ............................ TCAACAGGTAGGCTAGAGATCGTTGCACTATC 78507 28 100.0 32 ............................ TACAACCAAGCATGTCGCTATCACATTGGCAA 78447 28 100.0 32 ............................ TGGAGCATGAGCCGAGAGAAATTGACACAGAA 78387 28 100.0 32 ............................ TATAGTATATAAAAAATTCTATTACCCCAAAT 78327 28 96.4 0 .....................C...... | ========== ====== ====== ====== ============================ ================================= ================== 29 28 99.9 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : TTCCAGAAACAGACTTGGAATCATACATAATTCAAAATTTTATTCTTATAAAAACAATAAGCACTATTTTTGATGAAATTTACGTTATAGCACAAGTTTTATTGAACTTTAACATCATATAAAAATGATCTTTTTTAGCAGTTTATTGAGTTGCAAAGGAAGTATGTATTATCGTTTGCTAGATAAATTAAATTTTAAATATTTGATTGATAAATAAATTATTTTATATGAGGTATGTCGTATGATTCTAAGGAGTGAATCTATTAGAGTTTGTATTATATACTGCTATAACTTGTTGCTGATGAGGCAAAAGGGAACAATTTTGGGAAATATGCTTTTAATAGAATTACGATTATTCAAATATTTTAACCCAATATTTTTTTACTCTTTAACAACTGAATAAAATCAATAAGTTATATTGGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTACCACTTTATTTTTTGATCTAAAATTATA # Right flank : AATTGTTAAACCTCTCTGATGATTTTAAAAATTTATAGTGGTATAAATTGTTTATTTTATAGCAATAAAAAAGCCCACTTGAATCAAGTGGGCTTTTAGAATTTGGCTCTCCAACCTGGGCTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTCTACCGACTGAGCTATTGGAGAATCTGCATGCGATTATAAGGATATATCACGAGTGGTCAAGCCTTTGATGTCATCTTTTCTTCATTTTTGACTTGTATGCTTTTTATTTAAACAAATAAGATCAAAATTAAAAAAATGGATTTGAGTGGTTGCAAAGCGAGAGCTGACTTGTTAGATTAAAAACATAAAGAGCGTTTAAGTTTGACTTAAACCGTGTGGATTTAACCAACTTGCCAGCACTAAAATGGCTAAATAGGAGACAGCGCGATGACGACGCTAACTATTTCTCAAATTTTTGAAAAATTTTCTTTTTATCAAGAAAACTACCTTTCTATCCTGCAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 75689-74160 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADWNN010000021.1 Acinetobacter bereziniae strain ACIN00242 ACIN00242_c0021, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 75688 28 100.0 32 ............................ AGTGTAATGCGTTGGAACGGATTCAAAAGGAT 75628 28 100.0 32 ............................ ATTTGTTGCTTGGTTATTGCGAGTTGCTCAAG 75568 28 100.0 32 ............................ GATATCATGACTTTTTTTAAAAAAATCTTGCG 75508 28 100.0 32 ............................ GATTTGACATGCTGTTCCCCTGAATTTAAAAA 75448 28 100.0 32 ............................ TTGAGGGTCATTCTATGAAAGCTCTTGATCAT 75388 28 100.0 32 ............................ TTAAAAATTTGATAAGAGAAAAAAGACAGTGT 75328 28 100.0 32 ............................ AGTCTCTACATTTAACAAACGTCAATTAAAAC 75268 28 100.0 32 ............................ AGACTTAGAAAAATCGGGGGTGGCTGTCTTAG 75208 28 100.0 32 ............................ TTGTAGCTCCAAAACTGTTCGTTTCATGACAA 75148 28 100.0 32 ............................ TTTATAAAGTGATTTTGGTTCTGCTGGCTGAT 75088 28 100.0 33 ............................ AACCCAAGTAAGTGCAGAAGGACCAAGTTTTAC 75027 28 100.0 32 ............................ ATTCAACGATCAACAAAAGTTGCATGGATTCG 74967 28 100.0 32 ............................ TGAATGTAATATGTATACATGTTCAAAGCAGG 74907 28 100.0 32 ............................ ATTTTCTGGTCGGGAAAACGGCATTTTAATAA 74847 28 100.0 32 ............................ AACACCTAAATCTATTTGCTCTGGGTCTAATT 74787 28 100.0 32 ............................ AAAACTTGCAGTTGCACATCTGCTTTAGCCGC 74727 28 100.0 32 ............................ AATAATATGACTGAGTAATTGAAGCGGATATG 74667 28 100.0 32 ............................ TTGTTATAATAATAAGCAACGCAAAAGCCCAT 74607 28 100.0 32 ............................ ATTTTCAAAATTTAATGTCGCCGTTTTGGTCG 74547 28 100.0 32 ............................ TTGTACAGCTTGTGATTCATCACTATTTCCAC 74487 28 100.0 32 ............................ AGTATGATTTTGAACACCTTGTTCTGATAATT 74427 28 78.6 32 .C...C.G...T.....C.......G.. TATACGTCATGATATTGAGCAAATATTACTCA 74367 28 92.9 32 .....C...................C.. TTGCAAAAGCAGCTTTGGCTAGTGCAATGGAA 74307 28 85.7 32 .....C.G..A......C.......... ATATTATTTTTAGGGGAATAACAATGAATGAA 74247 28 89.3 32 .....C.....T............A... ACTACGAGCTGATAAGGGGATAGACATATCAC 74187 28 75.0 0 .....C.....T...AA.CC....A... | ========== ====== ====== ====== ============================ ================================= ================== 26 28 97.0 32 GTTCATTACCGCATAGGTAGCTTAGAAA # Left flank : TCAAAGTGGCTAGAAAGATTGGTAGACTATGTTCATATCACTCAACCACGAGAAGTTCCAAAAACAAAAATCACTGGATATGCCCATTATTTCCGAATTAATCCAAAAATGACTTTGGAGGAACGTATTGCTCATCAGGCTCAACGACGAAGCATTTCTTTTGATGAAGCTCAACAACATTTTAAGCAATATAGTGAACAACCTGAAATTGTTCCCTATGTCAGTTTAAAAAGTTTAAGTACTAAACGTGAACAAAATATAGATCGATATTATCGGTTATATATTGGGAAATCTGTTGCTGAAGAAGCAAATGATGGAAAATTTGGAACATATGGTCTCAGTAGAACAGCAACAGTCCCCGAATTTTAACCCAATATTTTTCCACTCTTTAACAACTTAATAAAATCAATAAGTTATAACAGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATCACTTTATTTTTTAATCTAAAATTATA # Right flank : TATAAACGCCTTAACATCTTAGCTAAATTTAGGAAAGTACAAACATATGGAATAATTTTTACAGTAAATAAAATATGATAATTTAAATGATAATTATTTGCATTATTAATTGCATTTGAATATTTGGTAAAATACAATGTGCAACAATTCTTACACAATCCCTCCGTAATTTGAGTTGCGTATTAACATGAATAAACAATTAATACTTCAAGCACTATCTCTCTCCATACTCTCAGCAATGTCAATTTCAACATATGCAAACGAGACTTCAGAAGACTCTTCCAAGCTTAAAACGATCGTCGTTACAGCAAGTAGTCAGGCGGTCGATGTTAAAGAAGCACCAGCCAGTATTAGTGTGATTACCAGTGAAGATATAGAAAAACAACCGGTGGGTAGTCTTGGCGAGTTATTAAGTAAAGTACCTGGGGTTACTGGTGGAATTAGTCCTACCAAAGAAGGCTCTAAAATTAAACTACGCGGTTTACCTGACAATTACACAC # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: R [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.00,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [22-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 6878-8048 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADWNN010000060.1 Acinetobacter bereziniae strain ACIN00242 ACIN00242_c0060, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 6878 28 100.0 32 ............................ AGAAGTTACGTTCTTTTTCACGCTGTGATTCT 6938 28 100.0 32 ............................ TTAATCATTGGCGGTATCAGAACGGAGGATAG 6998 28 100.0 32 ............................ ATTATAGAATTGGATATCTAAAAACATGTTTT 7058 28 100.0 33 ............................ AGTTCAAATTGCAAACAATCAAGTAGAATCTCA 7119 28 100.0 32 ............................ CAAGACTTCAAGAATGGGTTAAAGGTCTTTTA 7179 28 100.0 32 ............................ AAAAGGCTAAAAGCAAATGAGCGTAGATAGTA 7239 28 100.0 32 ............................ AGTGGCTCAATTGGTTGCTTTGGATTTTACAG 7299 28 100.0 33 ............................ AATTAAGCTTCTGTGGGATTGATACAGATACAA 7360 28 100.0 32 ............................ ATTGCGTACATGTGTTTGTCGCTTGATCGACA 7420 28 100.0 33 ............................ ATGTACACCCTTACAATCTCGGGTGAAAATACA 7481 28 100.0 32 ............................ AAAGACTACAAACCAAGCTGCAGACAATCACA 7541 28 100.0 32 ............................ ATAGCTGTATGAGATGTAGGTAATCTTTCCCA 7601 28 100.0 32 ............................ AAGCGTTTGCAATGTCGTTTGCCATATCCTCA 7661 28 100.0 32 ............................ TGTAGGTGCAGAATATAACCCTGCGCCTGTTC 7721 28 100.0 32 ............................ AACAACGGCAGAATTAGAGGGTACAGCTTTAT 7781 28 100.0 32 ............................ TTTTGGAGTTGTAACGTCGGGAACAATACTGC 7841 28 100.0 32 ............................ AGAAGCACAGGCAATGTATATCAAAGCGCGAG 7901 28 92.9 32 ..................C.T....... TTTCAATAAATAACAACGATCAAAACAATAAA 7961 28 100.0 32 ............................ ATTCATGGCATCGGTTGAAGTTTCAGATACAT 8021 28 96.4 0 .............G.............. | ========== ====== ====== ====== ============================ ================================= ================== 20 28 99.5 32 GTTCACTACCGTATAGGTAGCTTAGAAA # Left flank : ATGTAATAAGGGATTTAAGCGAAATCAGTAGCTTAAAGCCCTTTTTTTATGCGTATAATAATATGTGATAATATCAGCCTACTAGGTTTAAATGGTGAAATTAGCCGATCTAGCCGAATAATTTACGTCAAGATTACGTCAAGCTTTTGAGTTTAAGATAATGAAAATACCAAAACCGATTAAACGTGGTGAAGTTTGTTTTACTAAGAAAATAATGAAATGTAAGATTTCTTCATTTTCTAATGATAAATTAAATGAGTGGCATTAAAAACATGTGTGAATATTGGAAAATCTTTTAGTGATAAGATAAAAGTAGCTGATTTAGAGTATATAGGCTTAATTAATCAAACAAATATTCTAAAATTTTACCCCAATATTTTTTAACTCTTTAACAACTGAATAAAATCAATAAGTTATAATTGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATTATTTTATTTTTTGTTTTAAAATTATA # Right flank : AAAGATTTCTTCATTCGTAATTTGAATTGTTCAAAATTTGATTTATATTCATTTCTGTTTTATTATTTGCTTGGAGACGCCGAGTAGCGGTAACTACCCGACGCATTCTGTTAGTGAGCTGATTGAGAAATCAACAACAATAACAGGATGACAACGATGATTAGACAAAAGCGCATCGTAAACCTCCAAGGATTAATGTAACGAAACACCGTTACAGGTCACCCTAGCCCCAATGACTAGGGCAGGTTACTGTAACACAACAAAAAGCGCCCATGGGCGCTTTTTGTTGTTTAAAGAGATGAGGTTAACTACATCCTATCCAGCGTTTGTCTTCTTCTTCTTCAATTACCATATTCACTTTTTTCACTTTCAATTCAGCGCGATCATTTATTTTATCTGTTTTGTACACTGAGAGACGTCAAGAGAATACCTTTCGTATAATCTGATCATTCTCTAACAAGCATTCACTACCGTATAGGTAGCTTAGAAACCTTACCAAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGTATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: F [matched GTTCACTACCGTATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [86.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //