Array 1 8045-6888 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JADNBS010000004.1 Streptococcus salivarius strain D53t1_180928_H11 NODE_4_length_147426_cov_30.1114, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
      8044	    36	 100.0	    30	....................................	TGGTGAAGTCGCTTGAATTGGCACGAAGTA	
      7978	    36	 100.0	    30	....................................	GGTATTGTCTCAACTATTAATAACCCTTCT	
      7912	    36	 100.0	    30	....................................	CTACTGCCATGATATCCCTATTGCAGTGTT	
      7846	    36	 100.0	    30	....................................	AAACGAATTGCATGACCTTTGGGTTGCTCA	
      7780	    36	 100.0	    30	....................................	TGTTATCCTGTAATGCTACAGAATTACCCA	
      7714	    36	 100.0	    30	....................................	TCTACAATCAATCCCAGTCCACTATGACAT	
      7648	    36	 100.0	    30	....................................	GTAACAATGAAGCTAATATCAAGCAGCTTA	
      7582	    36	 100.0	    30	....................................	TGGTTTGCGAGATTTTAAAAAAGGTATATA	
      7516	    36	 100.0	    30	....................................	AGGGCCTGTGCAAGAAATAACATCTATACA	
      7450	    36	 100.0	    29	....................................	GCTTGGTTGCGACAAATTCAAAGTGAGTC 	
      7385	    36	 100.0	    30	....................................	ATGTGGATACTGGTGAGCCTACAGCGCTTA	
      7319	    36	 100.0	    30	....................................	ATCACGGCAGTGGTCAAAGGTATCCACGCA	
      7253	    36	 100.0	    30	....................................	CAAATCAGCCAATTTAAGCAAATCACAATT	
      7187	    36	 100.0	    30	....................................	GCAGCGTTAGAGATATGACGACCAGCGTAT	
      7121	    36	 100.0	    30	....................................	TATTTTTCAGAAAGAGGAGAATTAGGGGAC	
      7055	    36	 100.0	    30	....................................	AGTAGAAGGCTTTTCAATGGCTTTCGAAGG	
      6989	    36	 100.0	    30	....................................	TGAACTAATTAAGACGATTGGAGAACACAA	
      6923	    36	  80.6	     0	............CC...............T..CCCT	|                             	
==========	======	======	======	====================================	==============================	==================
        18	    36	  98.9	    30	GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC	                              	       

# Left flank :   AAGAGAATTTTGGTGTTCGTCAATAGTTTGTCGTATTTTTCTAATGATGAAATTTATCAAATCTTGGAATATACAAAGTTATTACAAGCTGATGTATTATTTTTGGAACCTAGAAAGATTAAAGGTATTCAACAATTTATTTTGGATAAGGATTACATTTTGATGCCTTACAATAACTAGTAATTTGGTAATAAGTATAGATAGTCTTGAGTTATTTCAAGACTATCTTTTAGTATTTAGTAGTTTCTACATGAAGTTGAGTGGAAGAATCATTTTGTTAGAGAGTAGGTTATAAGCTATCTGATAGGTGAGAAGGTAAGTTGATTGGAAAAAGATTTCTAAAATTTTTTCGATATAGCGACAGCTCTATTTGTTAAAACGTTGTTATATAAGGCTTTTTAAGGTATAATAAACATAAAAATGGAATCATTTTGAAGCTGAAGTCAGGCTGAGATGAATAGCGCGATTACGAAATCTGGTAGAGAAAAATGACCTACGAG
# Right flank :  CTCTTTGTAACGATTTTGGGTTGACTTCTCCTTAAACTCATCCTATCATAGAGGAGTCTAGTATTGAAATGGGGGAAGAGACATGTTATACGAATATCCAGCGATTTTTCACACGATTGAGGAAGGTTATCAAATTAGTTTTCCTGACTTTGGTCGTAGCATTAGGGCAGATTCTTTGCCTCTTGCCATGACGAAAGCATCTGTGTTTTTATCACATATTATTAAAGGGTATGAAGATAAGCCTTTACCTGAGCCGACTGCGGTTAGCAGTATTCCTAATGAGGAAGAACTCGTCGTGTTGATTCAAACAGAGCTTGATTAAGACTAAAAAACTCTCGGAAGATTAATTCCCGAGAGTTTTAGGTTTTATTGGCTACATAGACGCCCAGGACGACTAAAATGCCTGCAAAAATTTGTAGCTGCGAGAAGGGTTCTCCTAAGACGACAACAGCAGCTAGAATTGAGATAATGGTCGAAATCCCAATAAAGGATGCTGTTCG

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:61.11%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-4.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [7-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [61.7-56.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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