Array 1 8696-9183 **** Predicted by CRISPRDetect 2.4 *** >NZ_PISC01000003.1 Campylobacter concisus strain H3O1 NODE_3_length_220612_cov_89.3182, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 8696 30 100.0 34 .............................. AACTCTTTCTTTGGTGCTGTGATTGTTTTCTTTG 8760 30 100.0 36 .............................. TAAATCAAATAAGAAAAAACTATGAAAGCTAATAAA 8826 30 100.0 37 .............................. TCTATCAAGATGAAGTAAAAATCACGATTTCGATGTT 8893 30 100.0 34 .............................. GCACGTGCCAAAACGACGTGGCACGCTTGGATTT 8957 30 96.7 35 ..................A........... ACGCTTGCTCTAAAAGATCAACTAGCTCATTGTTA 9022 30 100.0 35 .............................. AAGCCATATTCAGGGCAAAAATTCAAAAATTCAGA 9087 30 100.0 38 .............................. TCGTCGCTTTCGCGTTTGGTGTATGCGTCAATCTTGTC 9155 29 86.7 0 ......T........A......-..A.... | ========== ====== ====== ====== ============================== ====================================== ================== 8 30 97.9 36 ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Left flank : AGCTAGATCCTCGCATCGGCTTTTTGCACGAGCCAAACTACCGCGCGCTAAGCCTTCACCTCGACCTTGCGGAGATTTTTAAGCCGATCTTGGGCGACACGTTGATTTTTAATATGCTAAATAAAAAAGAGATCACCGCAAAGGACTTCCAAACGGACGCTGGCAGGATAAAATTTAGCAACGACGCAGTGCAAAAGATCGAGCTAAAGATGATCTCGCGCCTTTGCGAGACGCTCACGGTGGGCGGTAGGGAGCTAACGTGGAGGCAGGTGATCCGCCGCGAAGTAAACAAGCTCAAAAAGTGCATCTGCGAGGACGCGCCTTATGAAGGCTTTAGGTGGGAGTGAAATCGTATTTTAATAAAGCGTTTTTTAAGATTTTAAAAAGCTTGAAATTTGGGGCTTGGCGTATTTGCACATGGCTAAATTTTAGTCAAATTTAAGGCGAAAAAATATAGACTTCTTGCACTAGAATGCCTATAAAATAGGCTTTTTGGTGCT # Right flank : CCCACCAAACATGATTAGCGACAACCGCAATCACTCTTTTGATAGTCGTTTTTTCGGTGTAATTCCATACAAATTTTTAGTTGGTAAAGTTAGATGGCAGGTATTTTGAGACAAATTAGCAAAACACCTTGACTAAATATTTTAGTAAGATTAAAATGAAGCAAATTATCGGATCAATGAATTTTAAAGAAGGTTATAATAATTTTTATCAATTATAATTAAAACAAAAAATATGACTTTATAAAACCCACTTGTAAAGACAAGCAGGTTTTAAAATGTTTTATTTCTCTAGTTTTTCTTTAAGTTTTTCTTTTTTAGATTTAGCTTTTGAAGCAGCTTTTTCTTTCTTTTCTTTTACTTTGTCAACAACTTTGTCTTTTTCGTCTTTTGCTTTTTCACCAATACTAGTTTCATCTTCTTTACTAGAAGTTAGCTCTTCTTTAGTTTTAGAAGCTTTCTTTTTAAATTTATCTTTTTTATCAGAGATTTTTTCTTTCATC # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //