Array 1 1098308-1100794 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFXB01000001.1 Clostridium tetani strain NCTC540, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 1098308 30 100.0 38 .............................. ACAATGAAGATTTTAGTGATTACTTTAAATTTGGAGAC 1098376 30 100.0 38 .............................. AGATTAAAGCTAAAGAATCTAACTTAACTAAAAATCAA 1098444 30 100.0 40 .............................. CATCAAACACCATCATTGGATCTTTTTCAAAATCGTTAGA 1098514 30 100.0 38 .............................. ATATAGTGTAAAGTTATGCTAGGATCTGAATGATTAAA 1098582 30 100.0 35 .............................. GAAAGGTACACCTTTTAATATATAAACATTAATCT 1098647 30 100.0 35 .............................. ACTGAACAATAAGGTTCTTCATATGCACTTAATGT 1098712 30 100.0 37 .............................. TCATATCAGCCATTAAATCAAACATTTCCTTATCATT 1098779 30 100.0 37 .............................. TAATCGTAAAATCGTTTTTAAGCAGTGTTTTCGCTAT 1098846 30 100.0 37 .............................. CTTGATTGTAAAGAATTTAATAAAAAAGAAATTGTAA 1098913 30 100.0 37 .............................. CTTGATTGTAAAGAATTTAATAAAAAAGAAATTGTAA 1098980 30 100.0 37 .............................. TATTTTGAGTTTTGTAGAATACTTGAAATGCAAATTA 1099047 30 100.0 36 .............................. ACAAGGATATAGCTACACTATAGGACACGATATAAT 1099113 30 100.0 37 .............................. GAAAATAAATATGTAAGACAATATAATGTTTTAAAAA 1099180 30 100.0 36 .............................. AATATTTGAAAATTAAAAGGAGCGAAGCAGATGAAT 1099246 30 100.0 35 .............................. AATTTAATTATTGCAAAAGATAAAAAACGTGGCAA 1099311 30 100.0 36 .............................. TTAGAAAGAGGAAATAAGACATTAGGAATAATAAAA 1099377 30 100.0 38 .............................. AATCATCATCTAAATCAAACTCTTTAATGATCCACAGC 1099445 30 100.0 38 .............................. CATTAGTTTTAAATAAATTTAAATTATACTAATTGACT 1099513 30 100.0 35 .............................. TTCCTTACTATGATAAAACTCTGTAGATCTTTTAT 1099578 30 100.0 27 .............................. GTAACATAGAGTGGGCATTTTCCGACC Deletion [1099635] 1099635 30 100.0 38 .............................. ACAAGGATATAGCTACACTATAGGACACGATATAATTA 1099703 30 100.0 37 .............................. ATGGATATTTAGCTCCAGGGCAACTTGAAGTACCTAC 1099770 30 100.0 34 .............................. ATGTATCATTTTGATCTTCTTGATACCTCTTTAA 1099834 30 100.0 38 .............................. CTTAATTCTTCTAATTTATATTTGAATCTTTCATAATG 1099902 30 100.0 36 .............................. CTTGTTTTATCTGTAAATAAGATTATATCTTTGCGG 1099968 30 100.0 35 .............................. TAGTCACATAAAATAAAATATCTTAAGTTATCTCC 1100033 30 100.0 37 .............................. AAGTGCGTTATTTACGCCTTCTATATGTCCGAATACC 1100100 30 100.0 36 .............................. TTTTCATTAGCAATTCCTTTGTACTGCCATCTTCCG 1100166 30 100.0 38 .............................. CCTAGTACGCCCAGCATACCCAAAAAAGAACTACTTAA 1100234 30 100.0 38 .............................. CTGGAAAGAGGCAATAAAGCATTAGGAATAATAAAATG 1100302 30 100.0 38 .............................. CTTACTAACACTTTCAGACCTAGTATTAAAATAATTTT 1100370 30 100.0 37 .............................. GTGTTACATCTCCCAATTTCTCCTCATAATACTTTAA 1100437 30 100.0 36 .............................. GCTATAGCTAGTATAGTAGATACGTTGCGAGAATGG 1100503 30 100.0 35 .............................. CATTAACAGGTGCTCTTGGGAAAACAGGAATGGCA 1100568 30 100.0 36 .............................. AAAACATATAAAAATGCGTCTATGGTCGTTTAAGGT 1100634 30 100.0 36 .............................. TTAGCATCTATAATATTTACTTCTTTAATAGTTCTT 1100700 30 100.0 35 .............................. ATATGTGATGATGAATTAGAGAAAGTGCTTGAAAG 1100765 30 96.7 0 ........................A..... | ========== ====== ====== ====== ============================== ======================================== ================== 38 30 99.9 36 GTATTAGTAGCACCATATTGGAATGTAAAT # Left flank : AAGAATATGAACCATTTAAAATATGGTGGTAGGAGAGATTTAAATGTATGTTATATTAGTTTATGATATAAAAAGTGGTGAGGAGGGGCAGAGAGTTTTAAATAGAACTTTTAAGGTATGTAAAAAATATTTGTCCCATATTCAAAACTCAGTATTTGAAGGAGAATTAGCAGAGTCACAAATAATTAAACTAAAATATGAATTAGATGATATAATAAGAAAAGATAAAGATTCTGTAATATTATTCAAAAGTAGAAATAAAAGATGGTTAACTAAAGATATGTGGGGTAAAAAAGAAGATAGAACCAGTAACTTTATTTGATTGTCTACCTAAGATGATGTTAAAATATAAGGGAGTAGACAATTATAGTTATATTAATGGTTTATAAATTATTTAACATAACTTGTATTATAATAATAGACTATAAGAAATCCCAACTTAGTAGGTAGACAGAAATAGAAGTTATACTATAGACATATAGTGCATCATAGATGAACGC # Right flank : TTGACTGTAACTATAGTATAAATAGGTAAATAGGGACGGTTAATGAATTTTTCAAAAGTATGATATAATAAAAACATAATTTACTTGATGAGGTATGATATGGATTTTAATGAAACAATATATAATAGAATATTAAAATTTGTTAAGGAGAATCCCGATAGTGTTTATTTGCCACAGGATTTTGATGAAGCGGGAAAGAAAGATGCATATTTTATTTTTAATGCGAAATGCGGAACGGAAAAATTTGAAATTGAAAATAGCAATAATTTAATTAAGCTTATATCAAATTATTTAAATGATGAAGCTCAATATAATGATTTAATAGAGTATATTCATGAGTTTCCAATAATAGTATATTATTTTGAGTTTTGTAGAATACTTGAAATGCAAATTAAGGAAAGCTTGTTAAGTAGGAAAAAGGTCATAGAGGTAGGAAAAAAATTTGTCACCGAAAGTAATGATAACGAACAGATAAAGCTTGGCATTGCTTTACTAGGGTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAGTAGCACCATATTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 1459359-1458677 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFXB01000001.1 Clostridium tetani strain NCTC540, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1459358 30 100.0 39 .............................. TACTGTGTTACCTCCTTTCTTGTATTGTTCTCCAGCCAT 1459289 30 100.0 34 .............................. AAATACGGAACTATTGTAGTTCTACAATTAGGGT 1459225 30 100.0 36 .............................. TTAAGATTTACTTCATTTCCCCAACAGTCCCAACCT 1459159 30 100.0 35 .............................. GTTATGCTGCAACTATGTGCTATGGTTGCAAGAAA 1459094 30 100.0 34 .............................. TCCCTTTCTTTTTGGCATAATAAAAAACTAGCTA 1459030 30 100.0 34 .............................. ACTTTTAAAACCTGTTGTCCTGGTAGCTGCTTTT 1458966 30 100.0 36 .............................. TTTATATTTGGATTAACAGTTGTTAATTTAGCACCA 1458900 30 100.0 34 .............................. TAATATTTAAGTTTTTCTCGAACCTCTGCAAAAC 1458836 30 100.0 34 .............................. AAAAATAAAAAAAGAGGTAGCTCCTAGCCTAAGC 1458772 30 100.0 36 .............................. TGCCTTCCTCTAAGTAACTAAACAATTCATTTATCT 1458706 30 90.0 0 ............T...............TA | ========== ====== ====== ====== ============================== ======================================= ================== 11 30 99.1 35 GTTGAACAATAACAAGAGTTGTATTTAAAT # Left flank : TACTATTGGACTCTAAAAAAGACGATGAAATAACAATAATTAATAACTCTAAAATAGATGAGGGCAAATTCTATATTGGAGTTTTAAATTCTGAGAATGAGATTATTGCTTTTGATAAAGAAAAGCAAGACAAAATAACATTTGTAACTCCTGAAGAAGGATGCTATCTTGTTAGGATTTTAGCTAAAAACTCTAGTGGAAAATGTGATGTGAAAGTAGATTCTAAAAAAGGCATAGATCTTAATTACAATTCTATTAATGGGCATAATATGGGTTTACTAGAGAAAAATAATTGAATAAATCTTATATATAAAGTAATATTATTTACCAGGTGATTTTAATTGATTACATGTTTTAAAGCATTGATTTAACAGGGATTCATTAATGTTTAAAGGAAGCATTTTAAAAAAGCTAAATCGCCTGGTAAATTTTTAATGAAACCTTGAAATATCAATAGGTTTGTGGTATTCTTAATTTTAAGAAACCTTGATTTTACAGTG # Right flank : AACTAAGCGAAACTATTAAAAACAGGAAGTGGAAAAATGTGGTACTTGAATTTACTGCCAATTCTTAATTTCAAAAAAACTCCTTTATAATAATATTGTAATATTGAAATATTATTGGTATAATACACTCAAGTAAAGTTTATTATAAACTTATTTTGATTGTTATAATTGTGGGTTAATTTTATATTTAAGCTAAAGAATTACTAATTCATTCATATCTTAATACTTTTAAAATAGGAGAATGTGTATATGAAAGAATTTAGTATTAATACAGATGTTTATTTTGGAGAAGGCTCTTTAGATAGACTAAATGAAATTAAAAATAAAAGAGTACTAATTGTATGCGATAAGTTTATGGAAACTTCAGGTATGGTTACAAAAGTACAACAAAAGCTTACTGACTGTGAAGTAACCATATACAGTGATATTGTTCCTGACCCATCTGTAGAAGTTATTGCATCTGGTATTCAAAAATTACAGAGTTGTAATGCACAGATTAT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACAAGAGTTGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 3 1461565-1461210 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFXB01000001.1 Clostridium tetani strain NCTC540, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1461564 30 100.0 35 .............................. ACTAAATCCACATCTTTGTATTTATCTTGTAGCTC 1461499 30 100.0 37 .............................. AAATATATATGAGCATAGCTCAAAAGGAGAATTAATA 1461432 30 100.0 35 .............................. TTTTGTAAGCATTCATTATCGTTGTTAAAACATCT 1461367 30 100.0 34 .............................. GAAGTTTGCCGACCTAGATTGATACGGAACACAC 1461303 30 100.0 34 .............................. ATTGCTGTAAGAGAATATATTTTATCTGGATTAA 1461239 29 90.0 0 ................-.A...T....... | T [1461226] ========== ====== ====== ====== ============================== ===================================== ================== 6 30 98.3 35 GTTGAACAATAACAAGAGTTGTATTTAAAT # Left flank : ATAAACCCTTTTAGAAATGAAGTGGTTTTAGGAAATCTAGATGATCTTTTAAATACAGAACTTATAGCTAAAGATGTAAATTATATACCTTTTGATAATTTAAAAGAGCCAATGGAAGTTGAAGCTAAAATAAGATATTCTCAAATTCCTTCAAAGGCAGTAATAACACCTATGGAAAATGATAAAGTAAAGGTGAACTTTACTGAAAAGCAAAGAGCCATAACTAAAGGGCAATCTGTAGTTTTTTATAAAGGTGATTTATTAATAGGCGGAGGAATAATTGAATAAAGTTTCTTTTAATACTTATATATAAAGTAATATTATTTACCAGGTGATTTTAATTGATTACATGCTTTAAGGCATTGATTTAACAGGGATTGATTAATGTTTAAAGGAAGCATTTTAAAAAAGCTAAATCGCCTGGTAAATTTTTAATGAAACCTTGAAATATCAATAGGTTTATGATATTCTTAATTTTAAGAAACCTTGATTTTACAGTG # Right flank : AAATCATTTTGAGAATATACATTTATAATGTGACTATAAAATTTTAGCCCTAAAATAAAAGAAATGGTGAAATGTTTTGGTCATACCCTCAACTACATATATGAGAATAGTTTATTCCTCTCCATTAACATATAATATTTGTCCTGATAGTGGGTAATTTTAAAATTTTTATGCATATTTATATAAAATAGAGTATTACTTTCTTAGGAAAAATAAGTTTTATAAAATAATTATATTTTATATTTATTGATGTTTTATTATATGAGAGCCTTGCTAAATGTATTTTACAGCTATTTATAATAATTGGTATTTAGCCAATCCTAAATATAGGTCTTTGCTCCCATATGCCATACGTACACTTTATTTGAATTAACCTTTAATGAAGTTGAGATTTCATTAAAGGTTAAATTATTGTAATATCTTAAGATTAAAAGCTAGTCATTTTCAATTACTATAGAATTTACTAGTTTATCATGAAATCCTTGATTACTATCATTAAA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACAAGAGTTGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 4 1468218-1467930 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFXB01000001.1 Clostridium tetani strain NCTC540, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 1468217 29 100.0 35 ............................. TTAGAAATATTTATAAGCTTCCTTTAAATCTCCAA 1468153 29 100.0 35 ............................. TCCTAAAAGAGATTATATAAAAAAGTGCAACTCTT 1468089 29 100.0 37 ............................. TCAACATGAAATTATTGTGAAGTAGGAATTTGATGTT 1468023 29 100.0 36 ............................. TTCTATATTTAACATTCCTTTACCTCCTAAAAATAA 1467958 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ===================================== ================== 5 29 100.0 36 GTTGAACAATAACAAGAGTTGTATTTAAA # Left flank : TTTAGTTTAAAGGAGAGAATGTAGATGAGTAAAAATTTTAATTATAATTATGCATTTGTTTTTTATGATGTTAATGAAAAAAGAGTAAATAGAGTGTTCAAAACCTGTAAAAAGTATTTGTCACATTTTCAAAAATCTGTATTTAGGGGAGAACTTACACCAGCAAATTTTATATTATTAAAAAAAGATTTAAATAAAGTAATAAATGAAGATGAAGATTTTATATGTATAATAAAACTTATGAATAATAAAGTTTATGATGAAGAAATATTAGGAAATCCACACAGTTGTACAGGGGAAGACTTGATATTATAAATAAAAGTTTTACCAGGTGATTTTAAATAGGAATATGCTGTAAGATATTGATTTATAAGGGTTTATATCCTATTTTGAAATGTAGTTTTTCAAAAGTTAAATCGCCTGGTAAATTTTTATGGAAATGTTGAAATATCAATGGTTTTATGGTATTCTTAATTTTAAGAAACCTTGATTTTACAGTG # Right flank : ATATACATTAAAAAAACTTAGCCATGTCTTTTAAACCCATGATTATTCTGTCTAAATATCTTATTCTATGCTAATATAATAGGGTGAGGAGAGTGAAAGTTATATGAAAAAAAGATTTAATGTAACTGGAACCTGTATACCAGAAAGACACTATATGGTAGATATATCTAATAAATTAGATAGCATATTAAAATTAGTAAATAATGAAGAATATTTTATTATAAATAGACCAAGGCAGTATGGAAAAACCACTACTTTATACATGCTTGAAAGATATTTAAATAAGTTTAAGGATTATTTAGTCATTTCTATAAGTTTTGAAGGGATTGGTGATTTAATTTTTCAAGATGAGAAGGTATTTTCAAAGGAATTTTTACAGATAATGTCTGATTCTCTTTTACTAAATAGCCAGGCATTGTCTGAGTGTTTAGAGGAACAAAAGCCACATGTAGAAAACTTTATTGACTTATCAAGAGTTATAACCAAGTTTATTGTGAAAG # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACAAGAGTTGTATTTAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 5 1480075-1479656 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFXB01000001.1 Clostridium tetani strain NCTC540, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 1480074 30 100.0 35 .............................. CCGTCCTATATAATTTCTATAAATAAATTATACAA 1480009 30 100.0 36 .............................. TAAATTAATATAAAATAATTAAAACAAACTATTGAC 1479943 30 100.0 34 .............................. ATGTTTTCACTATATTACCACTTCCTTTTATTTT 1479879 30 100.0 34 .............................. GCAAATTCTATTATTTTAAGTGATTTCTCTATAT 1479815 30 100.0 35 .............................. GGCAGTCAACAAGATCTTGGAGCAGAACTTCGAGA 1479750 30 100.0 35 .............................. AAAGGAATGTAATTTAAGTTCTAGAAGTGCAGCAC 1479685 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== ==================================== ================== 7 30 99.5 35 GTTGAACAATAACAAGAGTTGTATTTAAAT # Left flank : TACTTGTTAAACAAGTTGAAACTTATCAAAGTAGAAGACTAGAAGTTGCAAAAAGTATAGTGGAGGCTATTGGAGGTAATATATACGAGCTGTTATATCATTATTATAAACATGATAAAAAATCATAGCAAAATAAACTTGAAAAAAGCCAATGATATAAAACAAATAATGCAAGTGGAAGGGGAAACTTGGCAAAGATTTTATGGCGAATTTAAAAATATACTTCCAGAGGAATTCGTTATGAATAATAAAGTTTATGATGAAGAAATATTAGGAAATCCATACAGTTGTACAGGGGAAAACTTGATATTATAAATAAAAGTTTTACCAGGTGATTTTAAATAGGAATATGCTCTAATATATTGATTTATAAGGGTTTATATCCTATTTTGAAATGTAGTTTTTCAAAAGTTAAATCGCCTGGTAAATTTTTATGGAAATGTTGAAATATCAATGGTTTTATGGTATTCTTAATTTTAAGAAACCTTGATTTTACAGTG # Right flank : TATACATTAAAAAACCTTAGCCATGTCGTTTAAACCCATGATTATTCTGTTTAAACATCTTATTCTATGGTAATATAATAGGGTAAGGAGAGTGAAAGTTATATGAAAAAAAGATTTAATGTAACTGGAACCTGTATACCAGAAAGACACTATATGGTAGATATATCTAATAAACTAGATAGCATATTAAAATTAGTAAATAATGAAGAATATTTTATTATAAATAGACCAAGACAGTATGGGAAAACCACTACTTTATATTTGTTAGAGAAAAGACTAAATCATATGAAAGAATACTTGCCTATAAAAATAAGTTTTGAAGCTATAGATACAGAGGGATATAGTAAAGTTGAAAAATTTTTAAGTAGTATAATGATGCAAATAGTGAACTATTTTAGATTTTCAACCAATAAAGAAATGTATAAATTCATAAAAAATTGTGAAAATCAAATTACTAATATGAATGATTTTAATAGTTTTATAACAGATTTAGTTGAGTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACAAGAGTTGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //