Array 1 9366-12702 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMXV010000007.1 Bacteroides ovatus strain J1101437_171009_H11 NODE_7_length_182074_cov_31.4727, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 9366 47 89.4 28 A.........A....T.........A..............A...... AGAAATTAAAAAAAAGTCAGCCAGCAGA 9441 47 100.0 30 ............................................... TTCCGGCGTTGCTATTTTAAATCCATTCTT 9518 47 100.0 29 ............................................... AAGCGGCTAGAGCTAGCTATGCCACGCAG 9594 47 100.0 29 ............................................... TTCCCGATACGTTATCGCAGCTTATCAGA 9670 47 100.0 30 ............................................... ACGGTTAAGCGGGTTAATCTAACTTACGTA 9747 47 100.0 30 ............................................... TTACTGGAAGACTTCCCTCTGCCAGCTCGC 9824 47 100.0 30 ............................................... TTACTGGAAGACTTCCCTCTGCCAGCTCGC 9901 47 100.0 30 ............................................... TTACTGGAAGACTTCCCTCTGCCAGCTCGC 9978 47 100.0 29 ............................................... AGGTATAAACGAAATATCAGCGGTAGACG 10054 47 100.0 29 ............................................... TCTCGTTAAAACAAGTGTAAAATGATTCT 10130 47 100.0 30 ............................................... ACAAGGAGAACCCTTTGAAACTGTCGTATG 10207 47 100.0 29 ............................................... GTTGTTATGTGCAAAAACGTATCAGGATA 10283 47 100.0 30 ............................................... AGACAAACGAAAATGTATTTTCGGGGAGAT 10360 47 100.0 29 ............................................... ACAAACACGGTAAAATCATAATCCGGAAA 10436 47 100.0 30 ............................................... TCTTCCCACATGGAACGAAGAGTAACTTTG 10513 47 100.0 30 ............................................... AAGAACTCTGCAAAGGATTCATTAAAGATA 10590 47 100.0 29 ............................................... TATGGATATGGCAACCGCTTGGGAAATGG 10666 47 100.0 30 ............................................... GTAACGCTAACTAAGGCGGCCTATGATGGT 10743 47 100.0 30 ............................................... ACGAAGGGAGTACAGCCGCCGGGAACTACA 10820 47 100.0 30 ............................................... GACTCATCAGAATCCACTACCTTTGTGTCA 10897 47 100.0 29 ............................................... ACCAACAATAACGGCACCAGATTTGCGAT 10973 47 100.0 29 ............................................... AACCATCTATAGTTTCATAACGCATAACC 11049 47 100.0 29 ............................................... CGGTTAAGCGAGTTAATTTAACCTATGTA 11125 47 100.0 30 ............................................... TAGCATACTTTAATAAGTTAGAGAATTGAG 11202 47 100.0 30 ............................................... CTGCAACTGTTTGCGAAAACGCTCGGCAGT 11279 47 100.0 29 ............................................... TCATTTATGACAGTTTTATAAGGGTTGTA 11355 47 100.0 29 ............................................... CTGCAAATATAGAGAACATTTTCAATACT 11431 47 100.0 29 ............................................... GGCTACACCGGAAGAACTTGCAGCGCTCC 11507 47 100.0 30 ............................................... AAAATTGCTTAGACAAATCAGGTGCAGACG 11584 47 100.0 30 ............................................... TTATGGTTTTAGTTTGATTTGCCCCTGTTA 11661 47 100.0 30 ............................................... ACAGCACCGGAACGAAGCGTAGCGGATATT 11738 47 100.0 30 ............................................... TTGCCGCCTACAGCTAACTTTAGTTCTTTG 11815 47 100.0 30 ............................................... CCCGCAGGGCAATACTTCCTTATTCGGCTG 11892 47 100.0 29 ............................................... TGCAACACTTCGTAGAGAAATTACCGAGC 11968 47 100.0 29 ............................................... GTCAACGGGTGATATGCTGGTAACGATCA 12044 47 100.0 30 ............................................... GCGAGTTTAATTTTATGGTTGCCATGATCG 12121 47 100.0 29 ............................................... AGTATATAGAAACAACAAGGGGCAACTAT 12197 47 100.0 29 ............................................... TCTTCACGCGTTTTTCATATTCAATTGGC 12273 47 100.0 30 ............................................... ATAGTTTCGTAACGTTTGGCGTGTGGAATT 12350 47 100.0 29 ............................................... TCCGGAAAGTAGTCGTATCTTTGAAGTGT 12426 47 100.0 30 ............................................... AGAAGACCAATAATAATACTCTCTTCGTCA 12503 47 100.0 29 ............................................... TATATTGCTTATGAAGATAGCGAGCAACT 12579 47 100.0 30 ............................................... AAGACGTTCGCCATCCTCAGACACTTTGTA 12656 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 44 47 99.8 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Left flank : AGGATCTCCTAGATGTTTTGTTATAATCTTATACTGTTTCATCGTCAAATAACGATGATTATACGGCATATAACCAGTCGGTACAAGCTCTTTGGTCAACGGGTTACAGTCTTTAATCCATCGGCTCAGACAACGCACTGCATTTTTACTGGTCGTACATCCGGGGAAGTACAATGCAGCTAATACAGCAAAAGATAAGATTCGTCTCATTTCGTTTTTAAAGTTTTAATTTGTCGTTTCATTGTTTCTTTCGTTCTACAAATATACAACATCAAAAAGCGTTTGTCAAGTCATTTGGGATTTTATCGTTAATATAAAGGAATACCCACCTTTATTAACCCAATTACTAAGCAATTGAAACAGATTGAGCATTCTCAATATTTAACGCTAGAATTAAGTCTAATGCTCACAAAAAGAAACTTAAAAATACTTATACGAAAATGACAATCTTTAAATCACAAGAAATAACATGTTTATATTAAAAAGAGATACATGAATGG # Right flank : TACATTTCATATAATAAGATGTAATTCAATTAGTTACAAAGAAGATTAGAAAAGAAAAAAGAAGACTGTTCCCAACACAAAATCTCGCATTAATGCGAGATTTTGTGTTCTAAAACAATTCCAATTGCTGCCCTGGTGTATTGACACTCTGCGCCTTCTTTCCATAGAAAAGTTCTATGTCCCCAAATTGTTTATCCGTAATACACATGACTCCGACATGCCCTAGTTCCGGAAGGAAAGATTTAACTCTTTTTATATGTACTGCTGCATTCTCGCTACTAGCACAGTGACGTACATAAATGGAAAACTGAAACATCGTAAAACCATCTTTTTGCAGATTCTTTCTGAAATCCGCATAAGCCTTCTTTTCCTTCTTCGTTTCAGTTGGCAAATCAAAAAGAACGAGCACCCACATTATACGATATTCACTAAGACGATCCATTACCGTTCGGGATAGGCAACTCGGCGAAGCTCTCCATTGAAACATTTATAAAGTGAGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.40,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //