Array 1 8883-9135 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JADANF010000053.1 Staphylococcus argenteus strain PHL3446 contig_54, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                       	Insertion/Deletion
==========	======	======	======	====================================	======================================	==================
      8883	    36	 100.0	    35	....................................	CTATAATAGTTACTGCTTTTGTAACCGTCCATATC   	
      8954	    36	 100.0	    38	....................................	CATCAACTGACTTTTTAACTGTTTTAGTGAATTCGTCT	
      9028	    36	  97.2	    36	......................A.............	TTAAAGATCTCAACAATAGCGTCCCATATTTTCTGT  	
      9100	    36	  86.1	     0	.........A.......G....C.....G...A...	|                                     	
==========	======	======	======	====================================	======================================	==================
         4	    36	  95.8	    37	ATTCGATAACTACCCCGAAGAAGAGGGGACGAGAAC	                                      	       

# Left flank :   TAAGAATTAATATACAGACACCTATGTCTTTTAAATATCAGAGTAGTTACATGATTTTTCCTGAGGTTAAACGTTTCTTTAGAAGTATTATGATACAATTTGATGCTTTTTTTGAAGAATATAAAATGTACGATAAAGAAACATTAGATTTTTTAGAAAAGAATATCAATATTGTTGACTATAAATTGAAAAGCACACGGTTTAACTTAGAAAAAGTTAAAATTCCTTCATTTACAGGAGAAATAGTGTTTAAAATTAAAGGACCATTACCTTTTCTACAATTAACTCATTTTTTATTGAAGTTTGGTGAATTTTCTGGATCAGGTATGAAAACAAGCTTAGGCATGGGGAAATATAGTATAATATAACTAGAATATAGCTGAAATTTAATTGTCAAAAAATGTGACATTCTGCACTTATAGTACAAGTGATTTGTCACTATTTTTGACAGCAAATTTTATATTTGAACTATTGATTTAATAGGCTTTAAAGAGCTATCT
# Right flank :  CCTCATCTTGATGATCCCAATTGGCCTGGTTAAAAAGAAATCGATAACCTTTCGTAGAATAGAGAATAAGTATTAAAAATATATTTGGTTTGATAAAATATTCTGCAAAAAAGGGGACAAAAAAATCAAGATTTAAACTGTAATTCATTATCTTTGAAATTAATTGACATTCAATTTCTAAATAAGCAGAGACAAAAATAACTTTCATACAAATAATTTCTTTGTGATTAAGTTGGAATTAGAAAACTAATACTAAACGAATGGAATGTATATTATTGAGGAATTGGATGCAGTGTGGTGCAATTTCGAGAACTACTACTTAAGAAAATAAACAATAAGAATTAAATCTGAGTCAAGATATAAAAACAAATATTTTTACCATAACTATATTAGTAAATACTTTATTATTTAGTATACGGATGAAAGCGAAGTGACAGCTAGCAATGCTCCAGATATAGGTATTAGTATTATAAAAGAGCAAGATTACCATTTAGAAAATG

# Questionable array : NO	 Score: 5.65
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATTCGATAACTACCCCGAAGAAGAGGGGACGAGAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [14,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GATCGATACCCACCCCGAAGAAAAGGGGACGAGAAC with 92% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-7.80,-6.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-7] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [76.7-63.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.92,0   Confidence: HIGH] 

# Array family : III-A [Matched known repeat from this family],   
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