Array 1 20248-22652 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFIQO010000089.1 Anaerobutyricum soehngenii strain HTF-83D scaffold_35, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 20248 33 97.0 33 G................................ AAGTAATCCGTGCCGCAGTTATCGCCGTTGTTA 20314 33 97.0 31 C................................ CATGAAGGAAGGAGCTATATGTCATTGATTT 20378 33 97.0 34 C................................ ATTTTATCAATAAGGCTTTTTACTTTAGAAACTG 20445 33 97.0 34 C................................ TTCGTGTTGATGAAAAAACAGCATATGTCCACAT 20512 33 100.0 33 ................................. CTTTTATCACATATGAGCCGATTATAGCAAATT 20578 33 97.0 32 G................................ ATAATATTCCTTATTGCTTCATTTGGAATATC 20643 33 100.0 34 ................................. ATTAACCGTCAAAGAGGGCTCGACATATGGCGAC 20710 33 97.0 32 C................................ ACGAAGCATTAGTCTCTGACAGAAAAACCGAA 20775 33 97.0 35 G................................ CTCTTTATCTTCTGCGGATGGGGAAACGGAAATGG 20843 33 97.0 33 A................................ TTTTTCAGGTGGTAATACACAATATTGTTACGC 20909 33 100.0 32 ................................. GCTTTAGATGATATAATATCTGAAATTACTAA 20974 33 97.0 34 G................................ TCGTTTATTCCTGCGAAAATATTGGTATGCAGGC 21041 33 97.0 34 G................................ CATTTAAAAACCTCCTTTAATCATTATAAATATA 21108 33 100.0 31 ................................. ACTGTATCACCTCAAACACGCAAAAATTACG 21172 33 100.0 33 ................................. CCATTTTTAGCCATTGCCAAAAGTGATGGTCTT 21238 33 100.0 32 ................................. ATTTAATGGCTTATATAGTGTTGTAAATAAGC 21303 33 97.0 33 C................................ TACCTGTAATACTCTTATCATAACTTGTAATGC 21369 33 97.0 32 C................................ CTTTTTTACCTCATGCTCTACACCGTCTTTAT 21434 33 97.0 34 C................................ CATAAATATGAATTGTCCCATCATTTTGTACATC 21501 33 97.0 33 A................................ TCCTTTGAAGTGCCTGTATATACAACCAGTCAT 21567 33 100.0 32 ................................. CAGCAATGAATAGCGTACTACAATCAAAAAAA 21632 33 97.0 37 G................................ AAAATGGAAACACGAGCAAGAAAAAGAAGTAACATAT 21702 33 97.0 32 A................................ TGAATAAACTTTTACTTTTCTTTTTAATCGAT 21767 33 100.0 33 ................................. CAATCACCTTGCACAGAGCCCCCAAGGTATACT 21833 33 97.0 32 G................................ TTAAAAAAGCTCTTGTTAATGCCATTTGATTG 21898 33 97.0 31 C................................ ATTAAATTAAGTAGCTGTTTGTTTTGCTGTG 21962 33 97.0 34 C................................ CAAAAATTAATTTAAACGTAATATTGTTAGCAAA 22029 33 100.0 32 ................................. TGGAAAGTTTGGAAGGGGTGGAGGGTGTAAGG 22094 33 97.0 33 G................................ CGTATTATCTTCAGCTCCATCCTCATCCATTTT 22160 33 97.0 33 A................................ AAATGTATCTGCATCGTAAATAATTGCATTTGG 22226 33 97.0 31 A................................ ATACAGTCTGGGAAACGGAGTCTTTTTTAAT 22290 33 97.0 33 G................................ GTTGCTGATTCTGTTCCGCTTAAATTGTGGTTC 22356 33 97.0 32 G................................ TGGTACTGTCTGGTCACTTGCTTCTGTGGTAA 22421 33 97.0 34 C................................ ATCAAATTAAGTAACTGTTTGTTCTGTTGTGCTG 22488 33 100.0 34 ................................. TTAAATTGGCTGATGTAGAAGAAAAGAAAATCGA 22555 33 97.0 32 A................................ CCGAAAACCTTGCAAGACTTGTATAAGTCATT 22620 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 37 33 97.9 33 TGTCGCCTCCTTCACGGAGGCGTGGATTGAAAT # Left flank : CTGTTTTTGAATGCATTATGGATAATGCAAAAGCAAAGGAGGTAAAAGCAAAACTACTCGAAATAATTGACATGGATAAAGATAGCCTAAGATTCTATTATCTAGGTAACGCTTACAAAAATAAAGTAGAACACTACGGAACAAGAACAAGCATTGACTTAGAAGGAACCTTAATTATCTAATTCCAGATTACAAAATAAACAATCGAATCTGCGACAAAATCCCTTTTTCAAAAATCTTTCTAAATTTAGATATAGTCAAATGTAGAAAGAAAAAGTTTCTTATCATCTTTGTTAAAAAGGAATACCTTGAAATAAAATATAGAAAATATTAAAAATTAAACACAGTGCGAATCATAAGCTACGCAAAAAACGTAGGGCATTCGCACTTAAAAAAGAAAGAATAGTACAACATATTGCGATATAAAGCTAAAAATAGTGGACAAAAAAGTTGTTGAGACTAGATATGTACATGATAGCTGAGGTATCACAATATGTTGC # Right flank : TATCTGATTGTCCACCCAACGAATTAAACGGCAAACACCCCATCAAATAGTCTCTTTTGTATAAAAAAATTAAAATTATCGTGAATGTTGCAAAAAAATATAGTCCATGATAAATTTTTGCAAAAAAATGACGGAAAATTATAGCATTTTTTATTCGTTTGTGCTATACTCATATTGCGCGTGAGGAAAGCGCATAAAGTAATGTTGATAGTTAATTGAAGGAGGAACACAACAATGGCAAAATGGGTATATCTGTTTACAGAAGGCGATGCCACAATGAGAAATCTTCTTGGTGGTAAAGGAGCCAATCTGGCTGAGATGACAAATATTGGATTACCTGTACCACAGGGATTCACAATTACAACAGAGGCTTGTACTCAGTATTATGAAGATGGTCGTGAGATCAATGATGAGATTCAGGGACAGATTAATGAGTACATTGAGAAGATGGAAGAGATTACAGGAAAGAAATTTGGTGATAAAGAGAATCCTCTTCTTGT # Questionable array : NO Score: 8.55 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.39, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGTCGCCTCCTTCACGGAGGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CGTCGCCTCCCTCGCGGAGGCGTGGATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.40,-5.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 68310-69412 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFIQO010000171.1 Anaerobutyricum soehngenii strain HTF-83D scaffold_10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 68310 33 100.0 33 ................................. ATGTTGATGATGTAGAGATTTCGCCAGAGATTG 68376 33 100.0 34 ................................. CTTAATATGGCAAGAAATACACTGGCTTTTAAGG 68443 33 100.0 35 ................................. TGCTAAGATCACTGCGATGCATATTGTTGCAGTAA 68511 33 100.0 33 ................................. TTTTTCCTACCTCTTCGATTGCATCTGCAATAT 68577 33 100.0 34 ................................. TTCTTTCGGATATCATACTCAGAGACATGAATCA 68644 33 100.0 33 ................................. TTATCAGCATCATTCCCAATAAATGATATTTTT 68710 33 100.0 33 ................................. TAAATATGCTGGTGGATGAAGGCTGCAAAGAAT 68776 33 100.0 35 ................................. TAAAGAAGGAGGTGGTTGTGATGGAGTTACATACA 68844 33 100.0 33 ................................. AACAATAGATTTTGAGTCTACCTTGTCTGCCAG 68910 33 100.0 35 ................................. TTGTTTATGGAAAGCAAGAAGCAAAGTCAAGAAAG 68978 33 100.0 34 ................................. TATTTGAACGAACTAATCACACTTGAAGAGTTCC 69045 33 100.0 33 ................................. GATTCATATGACAGGAAAAAGTTCTTTGTTCTC 69111 33 100.0 35 ................................. AACGGATTCGCAGGAACAAATAGCACAATCCAGCA 69179 33 100.0 34 ................................. TACTATGTGTCTGTGCAGGCCATTTGATTTGCTT 69246 33 100.0 34 ................................. TTTCTTCATCCTGGCATGTATTTCTGCGTGGCTT 69313 33 100.0 34 ................................. CGTAAGAGTACAAAGTGTTTTAACTTCGGTATCC 69380 33 93.9 0 .............T...........A....... | ========== ====== ====== ====== ================================= =================================== ================== 17 33 99.6 34 GTCACATCCCACACGGGATGTGTGAGTAGAAAT # Left flank : CTTCATTTTTGCTTAAGTAATATATTAAAAACGAGGAAGTGAATAATAATGATGGTTTTGATAAGTTATGATGTAAGTACGACATCACCGGCGGGGAAAAAACGGTTACGAAAAGTTGCAAAAGAATGTCAGAATCATGCCCAGAGAGTTCAAAATTCTGTTTTTGAGGCAGATTTAGATTATTCTTCATTTTTAAAATTAAAAGAAAAACTCATGGATTTAATAGATAAGGAAGAGGATAGTCTTCGATTTTATTATTTGGGGAATAATTGGGAGAGAAGAGTGGAACATATAGGTGCAAAGAAGACATATAATCCAGAAGGGGTTATAATCATTTGATTTTTAAATGAAACAGGCGAACTACTGGTGATTAAAAAAATCTAGGAGGTTCGCTTGAAAAAAATCCGTTTTAACGGTAAAATTAATATAATTCTAAATGAATTATAGGTCCATCCTGTAATATATGGGAATAATGTGATTGAAATATACTATATATAGCG # Right flank : TGAAATAAAAGTATTGAAAAGGTAAACATTATTTGTTCAGTGGTGGGGCTGATTCTCCATTTGACAATCATCTGGAAGAATTGTCAAGATGTGCAGTAGAAGTATATCATGTGTTACATTTTTGAAAAAACAAAAAAAGTCTTGACACATTTCAAAGCTTATAGTATAATAAATTTCGTTGATGACGTGGGATCTTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCACAGGTTCAAGTCCTGTAGGTCCCACTTATTTTTATCAATATTTATGGCGGGATAGCTCAGTTGGCTAGAGCACGCGGTTCATACCCGCGGTGTCGCTGGTTCAAATCCAGTTCCCGCTATTTTTTATTGCATTTAAGCCGGACATATGTGGTTTGATGTATGGTTTTGGACAGTGGAAACGGATAGATACTTATAATTTAATAGACGAACGGACAAGGTCATTATGCAAAGCTGCCTCGTATTCTACACAACTTGTGTTGATA # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACATCCCACACGGGATGTGTGAGTAGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.30,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //