Array 1 1010000-1011310 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021963.1 Citrobacter youngae strain L6 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1010000 29 100.0 32 ............................. TGTTTATTTGTCGTTTCTGGTTTCTAGATGTG 1010061 29 100.0 32 ............................. AGAGGAAGAATGAAAAAGGTGATCACCCCGCG 1010122 29 100.0 33 ............................. CGCCGCAGATCCCTGAGCTGCTGTTTGACCTGC 1010184 29 100.0 32 ............................. AATGCAACGCCCTGAGCGCCGACGTAAGCCGC 1010245 29 100.0 32 ............................. ACGACGACCCGGCGCAGACCGCCATCGACCGG 1010306 29 100.0 32 ............................. CACATAGTTAACCGTGTCCCAGTCGGACAAGT 1010367 29 100.0 32 ............................. GTGGAATGGCGAGAAGGCGCAGGCCTTTATGC 1010428 29 100.0 32 ............................. AGGTCCAGGAGAGCGCCATGCGTATCACGACA 1010489 29 100.0 32 ............................. CAAATGCGGGATGGATGGAGAGTTAACAGGAC 1010550 29 100.0 32 ............................. CAATCAAGACCTAGACAATCTTGATTATACGG 1010611 29 100.0 32 ............................. AGGTGCAATTGCGTGAGGCTCGGGAGCGCGTT 1010672 29 100.0 32 ............................. ACAATGTTGCGTCTAATTCTCATTAAATAAAA 1010733 29 100.0 32 ............................. GTGATCGGCCTGTCCGGTACACCATTCACTAA 1010794 29 100.0 32 ............................. ATACTGGCCGTTGCCCCGGGCATCGAGCTTAA 1010855 29 100.0 32 ............................. CGCTGGAGCAGGACGCAGCGGACGGCACATTT 1010916 29 100.0 32 ............................. ACGGCATGAAAATGCTGATGGGCCAAATGGCG 1010977 29 100.0 32 ............................. TGGAAGCGATCGGACCCGGCTCCTGCGCAGCA 1011038 29 100.0 32 ............................. CTGTCCCTTTGTTTTACCAGAGCGGTCCAGTA 1011099 29 100.0 32 ............................. ACTCATCAATACTGCAAAAACTCGGTGTATCT 1011160 29 100.0 32 ............................. GATACGCCTGAATTCGACGTTATCTCGCCAAC 1011221 29 96.6 32 ...........A................. AATTTATCCGGGACTACAACATATCTCTTTAT 1011282 29 89.7 0 ..........................GTC | ========== ====== ====== ====== ============================= ================================= ================== 22 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CTTATCGAAGATGTTCTCGCAGCAGGTGAAATCCAACCGCCGTTACCTCCTGAAGATTCACAGCCCATCGCAATCCCACTTCCTGTTTCTGTGGGGGATTCTGGCCATCGGATTAACTAACGATGAGTGTGCTAGTTGTTGTTACAGAAAACGTACCACCTCGCTTGCGAGGCCGACTTGCCGTCTGGTTGCTGGAAATTCGAGCTGGTGTATACGTTGGTAATGTTTCAACGAAGATCCGCGAGATGATATGGCAACAGGTCTCCGTTCTGGCAGAAGAAGGGAACGTTGTCATGGCGTGGGCAACGAATACGGAGTCGGGCTTTGAATTTCAGACGTGGGGTGAAAACCGACGTATTCCGGTGGATCTCGATGGATTACGATTAGTGTCGTTTCTGCCTGTTTTAAATCAATGAGTTAGCGATCTTTAAAAATACGGAAAAGTTGGTGGATTTCTTGTATGCCAAAAAAGGCTTAAAATTCAGTTGGGTAGTTTTAGA # Right flank : CATTTTAGCGTTACGTATTGAGCCGATGATGTCGTATTCCCTGCTGGCATAGAGACGAAAATGATAGCCCAACGTCTTCATCTAAAAAGGTGCTAAGAGTTTTTACCCGCTTTTGCCAGTTCTTTTACCAGTGGCAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCGGCCCGGTAACGCTTTATCGATATGCTGTTGGTTATCCAGTCGCACGTCGTGCCAGCTGTTGCCTGCCGGGAAAGAGGCGCTTTTGGCTCGCTGCTGATAGCCATCTTTCTTGCCCAGGTTCCAGTTGGTCGCTTCAACTGAAAGAACGGCAATCCCCGCGTTGTCGAAGACCTCTGCATCGTTACAACATCCAGTGCCTTTCGGATAGTCTTTGTTCAGACCTGGATTGGTGCTGGCAACGATACCGCGGCTGTGCGCGATAGCCAGTGCCCGGTCGCGCGTCAGTTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //