Array 1 6378-7321 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAINBA010000300.1 Escherichia coli strain C10-5 c_000000000300, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
      6378	    29	 100.0	    32	.............................	ACAATCCCACGCCGATAATCTCTATACAGCAA	
      6439	    29	 100.0	    32	.............................	GGCACGGAATTGTTATGCTGTTCCCCTGACCG	
      6500	    29	 100.0	    32	.............................	ATCCGCCGCCGGTTAACGCTGGACCAGTTCCG	
      6561	    29	 100.0	    32	.............................	CGACGTTTTCTAATATCACCCAGCAATCAATT	
      6622	    29	 100.0	    32	.............................	ATTTCATCAAAGCATTAAGGGATGGAATAAAG	
      6683	    29	 100.0	    32	.............................	TCATGAATATGGGGAAAACGAACAATCTGTTT	
      6744	    29	 100.0	    32	.............................	ATGACCATTGGTGAACGCATCCGCTTTCGCCG	
      6805	    29	 100.0	    32	.............................	CCGACGTGGGGATTTACTGCCACGCATAAAAA	
      6866	    29	 100.0	    32	.............................	TACAGTTTCCATAAATTCACCTCGTTTATATA	
      6927	    29	 100.0	    32	.............................	AGTTCCCACAAACCTGGGTGCATCTCGCGTTC	
      6988	    29	 100.0	    32	.............................	ACTGCAAAGTTCTTCACGCTGGTTTTTATGCA	
      7049	    29	 100.0	    32	.............................	CCAGCCGAAACAACGCCAGCAAAATCGACCGC	
      7110	    29	 100.0	    32	.............................	GGATATAGAGCGGGTACTCGAGCGAAGCGGGG	
      7171	    29	 100.0	    32	.............................	CCAGGACAGGCCGTGACGGTTGCCATTGAGTC	
      7232	    29	 100.0	    32	.............................	TTTTTGTTCTCTTCAAAACGCCGAACAACCAA	
      7293	    29	  93.1	     0	............T.....A..........	|                               	
==========	======	======	======	=============================	================================	==================
        16	    29	  99.6	    32	GAGTTCCCCGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   CGTGCTTGCTGCTGGAGAAATACAACCGCCGGCCCCACCTGAAGATGCACAGCCTGTTGCCATTCCGCTTCCCGTTTCTCTGGGAGATGCCGGACATCGGAGTAGCTGAGATGAGTATGTTGGTCGTGGTCACTGAAAATGTACCTCCGCGCTTACGAGGCAGATTAGCCATCTGGTTGTTGGAGGTACGTGCAGGGGTATATGTAGGTGATGTATCCGCAAAAATTCGTGAAATGATCTGGGAACAAATAGCTGGACTGGCGGAAGAAGGCAATGTAGTGATGGCATGGGCAACGAATACGGAATCGGGATTTGAGTTCCAGACATTTGGGGTAAACAGGCGTACCCCGGTAGATTTGGATGGTTTAAGGTTGGTATCTTTTTTACCTGTTTGAAAACAAAGAATTAGCTGATCTTTAATAATAAGGAAATGTTACATTAAGGTTGGTGGGTTGTTTTTATGGGAAAAAATGCTTTAAGAACAAATGTATACTTTTAGA
# Right flank :  GGACGCACTGGATGCGATGATGGATATCACTTGGAGTTCCCCGCCCCTGCGGTAGAACTCCCAACTCCCATTTTCATACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAGCGGTAGCATTATCCGCATAACATCACGGCAGCGACGTTCTATTCTTCCTGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAATTTGTTGCTTCTACCGAAAGTACGGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGTGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCACTGTTGAAATACAATTTATCGCCAACA

# Questionable array : NO	 Score: 6.24
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GAGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [6,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.50,-12.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [70.0-41.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.92,0   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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