Array 1 614481-614764 **** Predicted by CRISPRDetect 2.4 *** >NC_012589.1 Sulfolobus islandicus L.S.2.15, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ========================================== ================== 614481 25 100.0 42 ......................... TGTATCAGCATAACGGCGTCGACAGCTACGGGAATGGCGTAC 614548 25 100.0 39 ......................... CGTTGATGTCGATGCTGTTTACGAAGTTTATAACAAAAT 614612 25 100.0 39 ......................... GACCTTTCTCTCGCTAATTCCTAGCAAATTTGCAATCTG 614676 24 96.0 40 ...-..................... CTTCGAATCAAATCTTACCCTAATTCTAATTATGTAAATT 614740 25 96.0 0 ......................A.. | ========== ====== ====== ====== ========================= ========================================== ================== 5 25 98.4 40 GATAAATCCCCAAAGGGATTGAGAG # Left flank : AGTCTTTTTCTAGTTATTCTCTAAGCTGTAGCTTATTTTTACGTTGAACTTCTCCTCTATGTTTTTGCTTCCCATATGGTTTTTCCTTGTATTTCTTCTACCTTTATTTCCCTCTCGTTTACCTTCTTTTTTCTTCCTTTTCTTTCCTTGTGGAATAGGCATTTTTCTCCCTCTCTCTGGAATTCGTTAATCCATCTATATACTGTGCTCTTGTGAACTTGTAGTATTTTTGCTATTTCGCTAATTTTCATTCCTCCCAAGTATTGCCCTAGTCTCGTTTAAACCCTTAGGCTTCTTGCTAATTAGCTTCCTTTTTAAGGTCCTTACACTCATTTAGTTTTAATAGTGCATTTTGTCTAATATATCTTGGGGGCTGTTAGGTTCAAAGCGAATTAAGGTCCTTAGCACACTCAGCCCAACAGCCCCTATTACTAACACTAGATTTAACTCCCTTTTAGCCCCCGTTGCAGCTATTATGAAAAAGACTATATTTTAGTTTC # Right flank : GAACGTTAACTTAAATTTGCCTAGATGAGTTATATTTTTAGTTAAAGGAGTTGATAGGATAATGTTAGATAAGAAGATTGTTTTCGTTAAGGATTGGGGGGCTTATGTTAGAGTTAATAAGGGTATGATAACTTGTGTGGTAAAGGATGAGGTTAAATGGTCTTTATCTCCAGCTGAAATATCCTCGATCATAATTCTGGCTAATTCCTCAATATCTTAAGAGGTCATAAATTTGGCTAATCAGTACGGCATAGAGATAGTGTTCTTTAAGGGTAATGAGCCTATTGCTAAGATAATACCTGCATCTTATGCCGGTTCTTTTAAGTTATGGTTAAGGCAGATAAGAGCGTGGAAGAGTAAAAGGGTTAATTTCGCTAGGGAATTCATATACGGTAAGCTTCACAATCAATGGGTTACGTTAAGGTATTATGAGAAGAAATATAACATTAACCTAAATTCCGACAAATTATTACAGCTTGAAAGAGAGGTATTAGTTGAAA # Questionable array : NO Score: 2.98 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAAATCCCCAAAGGGATTGAGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.50,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 2 627117-619238 **** Predicted by CRISPRDetect 2.4 *** >NC_012589.1 Sulfolobus islandicus L.S.2.15, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ============================================= ================== 627116 24 100.0 37 ........................ ATTTTTTATATGCAGCGATGAAAAAAATTGTAAAGCA 627055 24 100.0 41 ........................ TCATTCTTTAATTTCTTAGCTAAATCAATTAGAAAATTCAC 626990 24 100.0 40 ........................ TTGACGGCGTGAGATATAGCTCTTGAAATCCCATGATGAG 626926 24 100.0 41 ........................ TGGTTATTTATCATTTCCAGCCCGTTTGTTGTAGGTGTTGG 626861 24 100.0 44 ........................ AGGTTGACTATTCCGTTACCATATGAAAAGATTGACAAACTACA 626793 24 100.0 42 ........................ AATTATATATTTGTGTATTATCTTAAATGTAATGATTAGCAT 626727 24 100.0 39 ........................ ATTTTTTCTTATGAAAGTCCTAGTTGTAGACCTCGATAA 626664 24 100.0 40 ........................ CTTATCCCCACGTAACCAATCTGGCTCCACGAGAATGGAG 626600 24 100.0 41 ........................ TTAATTCTTTGTTGATAATGGAAAGGCAGAGTTAACAACGA 626535 24 100.0 42 ........................ ATCTCCTGATTTAAATTTTGTTCTTGATTTAACTTTTCTTCT 626469 24 100.0 40 ........................ CCATAAGCCATTGTAATATTGAATTTAATAACTTTTTCAG 626405 24 100.0 40 ........................ ATATCTACACTTATTGCATTTAATGTTGAAATATTTGTAT 626341 24 100.0 40 ........................ TAGATTCACGTAAAGTAAGAGCGTAAAGAGATTTATATAG 626277 24 100.0 42 ........................ AGATTCTGTGGATTAGGGGGATAGCTAGGTACATCCATTCTT 626211 24 100.0 43 ........................ TGGAAAAGAAGTACATAGCGTTAGGTGACCTAAATTATTACAT 626144 24 100.0 36 ........................ ATGTATAATGATGTGTCACATGTACAAGATAATAAT 626084 24 100.0 39 ........................ ATTTATAAGTTACTATATTATATAACTAGCTAACTAGCT 626021 24 100.0 42 ........................ TTCTTGAAGTGTCTCCATCGTTCCATCCTCATTAACTTTAAT 625955 24 100.0 40 ........................ TAAGGGTCTGGGAGACGTCGTGCTAATAGACGACAACCCT 625891 24 100.0 45 ........................ TGATGACATTTTCTTGTTGGGGAGAAAACAGGGGGTTATATGCGA 625822 24 100.0 40 ........................ GTTCCGCACTTGAGGGGAGTCTAGCAAAGCTCGGCACTTA 625758 24 100.0 41 ........................ ACTCTTTTATACGCCGTTTTAAGGGGAATAAAATGTCCCGT 625693 24 100.0 40 ........................ TGAGGAATTTGGATATTCTCAAGTGGAGATGGTAAAACTG 625629 24 100.0 41 ........................ TTTTGTACACTTGATACTTCTACGATAATAGTGTTGGTTCC 625564 24 100.0 40 ........................ GTTCTGTCCATACCGCTAACGTGCTCGCTATTTGTCCTAT 625500 24 100.0 39 ........................ CAATCGAATTCTACTAGTGTAATTACCCACGATTACATA 625437 24 100.0 41 ........................ ATGTCTCTTTTTCTGTCTTTATCATTTTAGCATTCTGTAAT 625372 24 100.0 40 ........................ GTCTATTAACAAAAAACAAACATTCACAAAATTAGATTGT 625308 24 100.0 37 ........................ CTATGACTACATTTCCATCTGGAAAATGATGAATTAA 625247 24 100.0 40 ........................ ACGTTTATTCCCTCCTCTAAGTAAATGTACCAGTTACCTA 625183 24 100.0 39 ........................ AGTAGAGACGGGACTTCGTTTGCTACGTCAAAATAATGT 625120 24 100.0 40 ........................ ATACCCGCGGAGCGATTCCTCAGGCAATTTATCTATGCCG 625056 24 100.0 39 ........................ ACTTTGGGCTTTATTACTTCAGGCGTTTGGCTATGATCC 624993 24 100.0 36 ........................ AGGACTAAAGAGAGACTACTCATTCTTTTAGACGCA 624933 24 100.0 41 ........................ GCATAATGCGGAGTCGCAGTCGGTACTCTGGACTTCATCAA 624868 24 100.0 43 ........................ AGTGGTACTTGTGTAGATATGCTTTCAGTCCACGCTATGGTAA 624801 24 100.0 41 ........................ GTATATTACCTCAGCATCCACTACAGTTGCGGTGCCATTCT 624736 24 100.0 41 ........................ TCTGGTTGACAGGATACTTCCTCTTCTTTCGTACAAGTTAC 624671 24 100.0 40 ........................ ACATTATAAACTGTTGCAATATATTTCAATTTGGGATATT 624607 24 100.0 41 ........................ TATATCCATTCTCGTAATGTATTTCCGCTCCGTTATCTATT 624542 24 100.0 39 ........................ TTATAATCGACTTCCATCTTTCATCAAATAATTATGTAT 624479 24 100.0 39 ........................ CACAGGTCAACGTCGACTGCTAATTCACCATATCGAATA 624416 24 100.0 41 ........................ CAATTATTTCATCTTTGCTTTCAGCTCTTAATAATTTAGCA 624351 24 100.0 41 ........................ CACGATATTCGTAGATCTGCCGCGTACTGGCGTATAAATTA 624286 24 100.0 42 ........................ TATTTTATAAGTATCCGGACATCATACCAGAGGGCGCTCTGT 624220 24 100.0 40 ........................ AAAACTCCTCATGTGGTTTCCAGCTCTTGCTTTGGTTTCT 624156 24 100.0 41 ........................ AAAACAATGATCAACATCAGTGCAATAAGTATACTCGTCTA 624091 24 100.0 39 ........................ TTGAATATAGCGTAAGTAGCAAGCATCTAACAAGTAGAG 624028 24 100.0 40 ........................ TATCTATCGAACATTCTCCTATAGGTGGATAATTTACGCT 623964 24 100.0 40 ........................ CAGTTTACCGAGGTAGGGAGGTAGGTGGTAATGATGCCCG 623900 24 100.0 41 ........................ TCCACTAACCTTAATAATCTTTGGCTTCCGGGATATTTAAA 623835 24 100.0 40 ........................ TTGTTAATACTGGCGAAGGACATTTGCCAATCCCAGTGTT 623771 24 100.0 38 ........................ TTTCAAACTCAAATTTTCTTGAAAACCATGAACGGCGG 623709 24 100.0 42 ........................ TATCGATAATTAGTAGCAATTGTAATAAAATAAGTGTAAGCG 623643 24 100.0 40 ........................ TAGAAATCCATATTGCGACCTTCATCGTCAGGTCACCTCA 623579 24 100.0 40 ........................ ATTCCCCCGTACTGCAGGACTGTATCGACAAACTAATCGA 623515 24 100.0 40 ........................ ATTAACATCTCCAATGTTCTCGCAGGTTTCATAACTAAGC 623451 24 100.0 39 ........................ ATTTATACTGTGATAATTGATCATGTCACTAAGTTTCTT 623388 24 100.0 40 ........................ ATTGTCTACAAACAAGCAGATCTAATTATTATGTTTTATA 623324 24 100.0 40 ........................ TTTCCTCTTCACCTTCCCTTAATTTACTAATACCGTAGTT 623260 24 100.0 39 ........................ TCGAGTTAGCAAAGAAAGCCATGTACACAAAGATAGCGA 623197 24 100.0 41 ........................ AGACATGTTCCCATTCGATCACACACACGACATGGCGGATT 623132 24 100.0 41 ........................ AATGTTGAAATTGATGACCAAAAACAATGTATCAAACTTGT 623067 24 100.0 40 ........................ AAATTTTTGAGAAAGAATATTGTATAACACCGACTTTACA 623003 24 100.0 40 ........................ TAGTCAGGGTATGCCGATAGGAGGAGGAGCGGGCAAAAAT 622939 24 100.0 39 ........................ TGAACAGTTTGGATAACGCAAAGCTGAACACAGCTACGG 622876 24 100.0 43 ........................ GTTCTCATCGTAACGTTTGATGTACTCAAGCAGATGTTTGAAT 622809 24 100.0 42 ........................ CCTAAATACAAACTTACCCGCGGATAAGGCACCGCGTCTAAT 622743 24 100.0 40 ........................ TCAATTTATACGCAAGGGGAAGTACTGGAGCCGACCTGGG 622679 24 95.8 40 .........G.............. ATCAGTTGACCGGCACCTTGACTAGGGCGGTTAACGACAT 622615 24 100.0 39 ........................ TTATGGTTCTTAAGTTTCATCTTCATTAATACTTTAATT 622552 24 100.0 40 ........................ TTGGTAATTTCTGGATGGCATATAGGAAAGGAATGTACGA 622488 24 100.0 41 ........................ GAACCAAGGAAGGAAATTGAATACGTGACTGATACATACAT 622423 24 100.0 40 ........................ TACATTTATCAGGATGACTTCTACACCATGAAAGTCTGTG 622359 24 100.0 39 ........................ TTTCTCTTTCTTCTTCATTAATTCCTTCATCAAACTCAG 622296 24 100.0 42 ........................ AATTTATATCGCTGGATTTATTGCAACTGCAAATCAACAAAT 622230 24 100.0 40 ........................ CATTCCACTTCGTAATTTTATTGGGAATTCTGAGCCAATT 622166 24 100.0 40 ........................ GTACTTATACGTGTACACCACGCTATACCAATTATTTAGT 622102 24 100.0 36 ........................ CAAAAACTCATCCTTCTTGTAGGGGCGTGGAAGGAA 622042 24 100.0 41 ........................ ATTTTTCTAAGCTCAGCCTCTGCATTTCCTAAGTTCACGGG 621977 24 100.0 40 ........................ AATATGCAATAATGACCTAATAGAATTAAAAACTATTAGC 621913 24 100.0 40 ........................ TCTGATCGAATAGATATCATAACAGAAGATGGAAAAAGAC 621849 24 100.0 44 ........................ TTTTAAAACTCTTCTTTTTTCATTTTGAGTTGTTTCTTTATCTC 621781 24 100.0 40 ........................ ATAATATAATAATGATCCACCACTCTTTTCCCCTCATTAA 621717 24 100.0 41 ........................ AATTTTATCTATGCCAACTCTCATATTTAAAGTTTTCTTTA 621652 24 100.0 42 ........................ TGATTAAGTATTTTTCCATTTATGAGAAGTCCTTTCATATGG 621586 24 100.0 40 ........................ CTGCTTTTTTCACGATTTCAAAATTTATCCCGTGAAATAC 621522 24 100.0 38 ........................ TTACAATTTTTTGTGATGGGAAAGAGAAAAAGAAACAG 621460 24 100.0 42 ........................ GTCTATATTTACACAAAAATGATTTGAATAGCCTAAATTGAA 621394 24 100.0 41 ........................ TCCTTTGTATCACCATAAAAAGGCTTTATGAAATTTCTTTT 621329 24 100.0 44 ........................ AAAATTATAATTCTGTTCGATTCTGCTTTTATACTCATCATAAT 621261 24 100.0 39 ........................ ATGGGGTATCGGAATACGGCTGGCAGATACTCTATAACG 621198 24 100.0 44 ........................ TATTCTTCTTAGACCAATGTGACGAGTAAGGACAACTTAACCTA 621130 24 100.0 40 ........................ ACAGATAAATGCCACACCACCGTTTGACATGAATCAATTT 621066 24 100.0 42 ........................ TTAGACGAATATCTCTTCAATATTTTTTCTAAGTTCCTTTCA 621000 24 100.0 43 ........................ TCCAGAAGAAAAACTAAACACATATAAAGTGTCGAAGTTTTCC 620933 24 100.0 40 ........................ TATGTTAGTATAGTAACTCTTCTCCTAATTATCGTTTCGA 620869 24 100.0 40 ........................ GTTTTTCCAATTGATCTAATATTTCCTTAAGACTTGCCAT 620805 24 100.0 40 ........................ GATAAATTTACATTTTTAACAATTTCTTGATAAGCTTTTT 620741 24 100.0 40 ........................ CTGACGTATTTGTGTTTTGTATAGTACCTTGTAATAACAC 620677 24 100.0 41 ........................ ATCAGTCTTTGTGCATTTTGTATCGTATCCAAGTCGACCTC 620612 24 100.0 41 ........................ CTTTGCTCCAACGAGATTTTTATTTTTAAACATTAAGGCTG 620547 24 100.0 41 ........................ ACTGATGAGCTCCAGAGGTTGCTAGAGCTTAATACGCCTAT 620482 24 100.0 44 ........................ TTACATATGTATAGGCATCGACAAAAACCTTTGGCAATACTGGG 620414 24 100.0 39 ........................ AGCTAGTTAGGGAAAAAGTTTAAATACTGGTTTAACAAA 620351 24 95.8 41 .C...................... GTATGGGTTTGGATAGTTATAGCACTAGTGATCATAGCGTT 620286 24 100.0 40 ........................ AAAGTAATCGAGATTCCTACTTTCAATGTACCGGCTAGCT 620222 24 100.0 40 ........................ TTTATATATCCGCTTAGATAGCTGATTTTTAACACACTAT 620158 24 100.0 43 ........................ TGACTTGCGTATACTGTATTATCCTGTCCAGCTTCTTATGCCC 620091 24 100.0 41 ........................ TGATCTAAAAAAGACTCTAATCCTGATTTTTGCCCCCCTTT 620026 24 100.0 38 ........................ TAGCCTGGCGTACGGTAGTACCTAAAAGGTTGTCACAA 619964 24 100.0 42 ........................ CATGAGCATCTGTACTTCTCACCAAGAAAAAGCAAAAGCAGT 619898 24 100.0 40 ........................ AAGCTAACCCGTTTTTTATTTATTTCTTCTCTCAAACAGC 619834 24 100.0 40 ........................ CACCATAATACTCTGTTCATAAAATCGTTAAGCGAATCAT 619770 24 100.0 36 ........................ AAGCTTAAGAACCCTTTCTTTGCCAAGTCTTCAAGA 619710 24 100.0 41 ........................ TCTGCAACTGGAGCAATTCCATCAACATGTATGAACACGTA 619645 24 95.8 40 ...G.................... ATGGTAAGGTTTTTGCTTGTTATAATAGGATATAGTTTAT 619581 24 100.0 44 ........................ TTAGCTTAACTTTCTTTAACGGCTTCTCAAAAAAAGAAAAAGAA 619513 24 100.0 38 ........................ TATTCAGACAAGACCGCTGAAACTTGTTCATTTACTGA 619451 24 100.0 40 ........................ AAATATAATTGTTGAGAATTAGAAAGTGGATTATTATCGA 619387 24 100.0 39 ........................ CGATAGGTGACAGTGATGGTGAATATACTGGTGTAATGA 619324 24 100.0 39 ........................ TACACCGATAGGAGATTTGAAAGGTTCTTTTCCTCACTT 619261 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ============================================= ================== 123 24 99.9 40 GTTAATCTACTATAGAATTGAAAG # Left flank : AGACATGGACAAGCCTAGATATCTTCTGGGTTTTATTGGAGCCATATGATAATTCCAACCCCTTAGCTCCTCCTCTATAGGGTCAGAAGCCCTATAGGAGTGAAGCCTCCTAACTTGTCTAATTATCTGCGACCTCACGTTATACATTATGCAAAAAGAATCTAAAATGCACGATAATGATCCTTGTAAATTTCTTCCCGACTTTAGTAAGGATAATCATAATAAATGACGATTTTTCTCTAAATAAAGAATAATAGAAAATATAGGGAAAAGATTCTCCCGTATACAGTAGTTGTTTTCCTTTTTCCTTGTTTCGTTTTGGGTTAGGTTGTTTTCCTAAATTCATTATCTTCATGAAGAATTCGTTAAAATCCCGGGAAAACCCGGGAATAGAAAAAAAGATAAGAAAGAGTAATATAATACTAATGGAAAGAGTAGAGAAGAAAAACTTATAAGAAAGGGAGAAGAAAAGATAGAATAGAGGGTTATAAAAACCCTCA # Right flank : TTAGTGTATATTACCCTTGCAATTGCTTCGTCTTCACATATTTGTTAATCTACTATAATAACGCCCTTCAACCTCTCCCTAAGTATATTGTCGGCATCTATTGGTCTCTTCTTGTCGATCTTGTAGGGTTTTATGTAGGGAATTTTCAGTCTTTTTCTCGCTATTCTCCAAGCTGTTACGTAGCTTATTTTTACGTTGAACTTCTCCTCTATGTTTTTGCTTCCCATATGGTTTTTCCTTGTATTTCTTCTACCTTTATTTCCCTCTCGTTTACCTTCTTTTTTCTTCCTTTTCTTTCCTTGTGGAATAGGCATTTTTCTCCCTCTCTCTGGAATTCGTTAATCCATCTATATACTGTGCTCTTGTGAACTTGTAGTATTTTTGCTATTTCGCTAATTTTCATTCCTCCCAAGTATTGCCCTAGTCTCGTTTAAACCCTTAGGCTTCTTGCTAATTAGCTTCCTTTTTAAGGTCCTTACACTCATTTAGTTTTAATAGTG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAATCTACTATAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 3 631174-637795 **** Predicted by CRISPRDetect 2.4 *** >NC_012589.1 Sulfolobus islandicus L.S.2.15, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ================================================ ================== 631174 24 100.0 42 ........................ ATTATTTTTACTAAAGAAAGATGGAATAGCAGCAAAAGTGCT 631240 24 100.0 42 ........................ ACTTACGTATTTTGAACAATTTACGTAATCTTGAGTTAGAGA 631306 24 100.0 44 ........................ GTCTCTGGGTTAATCTCATATACTACTTTTATAAGTCCCTTTTT 631374 24 100.0 41 ........................ TGCCTTGCTAAACTTACATGGTAATTTATAATTTTTGGAAA 631439 24 100.0 39 ........................ ATTTATTTTCGTTTTACTCGAGAGTTCATTTAATACTTT 631502 24 100.0 42 ........................ GTATTTCATTTAGTCTTAACAAAAGTGGATACAGAACCTAAT 631568 24 100.0 41 ........................ AAACATGACAGAAGACCAGAAAAAGCAATTGTTAATGCAAA 631633 24 100.0 41 ........................ TTCTTTCTTCTACGATATATCCTCTAGCTATAGCCTCAGCT 631698 24 100.0 43 ........................ AATATAAAGTATATCACAAGGGTTGTTTATGCTGTAGATATAG 631765 24 100.0 39 ........................ TTGTTTCTTTCATGATTACTCGGAATAAAAATCGGATCT 631828 24 100.0 39 ........................ ATAGATCCCTCATACTTACTACGAAAATTAGAGGAGTAC 631891 24 100.0 45 ........................ ACTTGACGTCTTGACGGCTTACGATGAGTAAACAAGTAAAATTCA 631960 24 100.0 37 ........................ AATTCGGCATGGTTTACAATAATCAATGCTTTTTCCC 632021 24 100.0 40 ........................ TTTTTCGTCAATTCATGAACTAAACTTATCTCATCTTCTT 632085 24 100.0 44 ........................ ACAACCCTAGTGCAGTAGCTATATTCTTTGCGTCTTGGATATCG 632153 24 100.0 40 ........................ TGTTCTATCAGCGTCGTCAAGAAAACGCCACCGTATACGG 632217 24 100.0 43 ........................ AGTAAATTGTACATCAAACTGTGCATCATCTGAATGCGGATAT 632284 24 100.0 38 ........................ ATACGAATCACCTTTTTTCCCGATTACGTGACAAAAAC 632346 24 100.0 40 ........................ TCCACAATTCTTCTATATCGTCGCTGTAATACGTAAGCAT 632410 24 100.0 40 ........................ TCAATTTTAAGAGCTTTAGTGGAACTAATTCAACAAAAAC 632474 24 100.0 41 ........................ ACATGATATACAAGATAAAAAAGTGTTACAATAACAGTTAT 632539 24 95.8 40 .........T.............. AAAACTAAAAACTTCAATTCACTTATAGCTTTTTTCCTTA 632603 24 100.0 39 ........................ AAAATCACGCATGTAGGTCTCTATATCGTACAACACTTC 632666 24 100.0 37 ........................ ATATTCTTCCTTTTTCTCTTCGTCATTTTTTATTAGT 632727 24 100.0 40 ........................ GTCACATTTAGCAAAAACTATACTCTGTTCTTGTCTTATT 632791 24 100.0 40 ........................ ATTAATCTGTCATATTGCGTAATTTATGATATAAAATATA 632855 24 100.0 41 ........................ GTTCGTGTTCTGGAGGATTAATTATCGGTTCTGGTTCATGT 632920 24 100.0 43 ........................ CTCATCTCTTTTAGTTCTCCGTTATCCATCTCGTAGCATCCTG 632987 24 100.0 42 ........................ CACGTAAATATGAGTCAGGTATTACATAGTTGATGACATTGT 633053 24 100.0 39 ........................ AATATTTTCGGTATCACAAACGAAAATTGTGGTATTTTT 633116 24 100.0 45 ........................ GACTTAACTGTAAAAAGTTAATTCCCTTTTTTCTCTTTTCTTTCT 633185 24 100.0 40 ........................ AAACGTAAACCGATCGTCATAAATCCACTTCTCAGTTTCG 633249 24 100.0 43 ........................ CTATTCACTATGCGTTTATTATCTAATATGACAAAGAAAAAGA 633316 24 100.0 40 ........................ TTATTTCTGTATTCAAATTTGATTTTTTCTTTGTTTCTGA 633380 24 100.0 41 ........................ TTGTGATTGAACCGCTTAGGCTGAGTTTTCTGAAACTTCTC 633445 24 100.0 44 ........................ TTAATCATATTTACTAGAGCCGGACCTCCACCAAGTCTATTGAG 633513 24 100.0 40 ........................ CCTTTTTCACAGATATCTTAATTATTTCTTGTCCTAAGAT 633577 24 100.0 42 ........................ ATTTCCTATTTCCTAATGAACCTAGAATTACAGTGCTGACTT 633643 24 100.0 44 ........................ AACAAACTTATCATCAAATACATTGAGAAAATCTATGAACTAAT 633711 24 100.0 43 ........................ TAGCTCTGCTTTCATTAGTTAGAAAATCAATTTATGCAATTCT 633778 24 100.0 40 ........................ TTTTCTCTTACAATTTCTTCACTAAATGGCACAATTTTTA 633842 24 100.0 44 ........................ AAGCAATGGATTGCTGAATATAGAACCTCCTGTACCTCCTGCAC 633910 24 100.0 38 ........................ TCTATTGCGACAGTTTGTATTGTCATTTCAATTTTAAA 633972 24 100.0 39 ........................ ATATCTATTTTAAAAACGCAATTAAGGAATTTTCTTATT 634035 24 100.0 39 ........................ TATCTTCTCCACAAGAAATTCAGCTCACGGCACAATCTC 634098 24 100.0 39 ........................ TACTTCGTTTAAAAAGTCAACTGATGTCTCTGCGAAAGC 634161 24 100.0 42 ........................ CAAATCTATTTTTTGCAATTTTACTAGCTTCAATTTTTGAAA 634227 24 100.0 40 ........................ TCTCTGCTTGACTCAATAGTGCCGATAACTCTTTCATTTT 634291 24 100.0 41 ........................ GAACCATAACTCGTGGCAAACGTTACGTCTTCGTAGTCTCC 634356 24 100.0 40 ........................ CCTACGTCTGCTGCTCTCAGCCCTGCTAATGCTGCTTCAG 634420 24 100.0 43 ........................ CGCCATATTTTTCAATATCTTTATGATTTCCCTCACGTGCCAT 634487 24 100.0 40 ........................ TTGATGTTCCTCCATTTGCAATAAGCTGAACGGCATTTAT 634551 24 100.0 42 ........................ ATTTTGTTTTCTACAAACGTGTTCATTTTCGGCTCTAAGTAT 634617 24 100.0 41 ........................ GCGAAACCATAGATTCACCTCCTCACCTTCTTAGACCACCC 634682 24 100.0 40 ........................ ATTACCAGAACGGGCAACCCATGATAGTAAACGACCCCAT 634746 24 100.0 40 ........................ ATAGATCCCTCGTACTTACTACGAAAATTAGAGGAGTACC 634810 24 100.0 39 ........................ GTCGGGGTGTTTAGTAGCGACCTCTTCCTTAAAACTTTT 634873 24 100.0 40 ........................ TCCGAAGTCATAGAAGAGATTTACAGGAGAAAGAAGGCGA 634937 24 100.0 38 ........................ TCAACTGCTATCTCCTGAGCTGTAACACGTTCATATGT 634999 24 100.0 37 ........................ GATTCAATAAGATCTTCATACTCTCCAAGAGTATACA 635060 24 100.0 41 ........................ TAATTCGCTTATTAGACAAAATGCACTATTGAAACTAAAAA 635125 24 100.0 39 ........................ TTCATCTTTACTAGCTAACTTATTTATTTTTACTTTTAT 635188 24 100.0 40 ........................ TACATGGAGAAGCAGTATATTGAACTATCTAGAAAATATT 635252 24 100.0 42 ........................ CGCATATTTCCCAGGAGCAATCTTCGCAACTCATTACTCTAC 635318 24 100.0 39 ........................ TACGTGGCTTCTAACCAGAAGAACCACCCATCGCACTCA 635381 24 100.0 40 ........................ TTATTTGTTCCAATTACTAATTTTCCGATACTTCCATAAA 635445 24 100.0 40 ........................ AACGACTTACAAGCAATTGCCCAGGAATTGGCGGATAGGA 635509 24 100.0 40 ........................ TTTGCGATAAGATTAGAAACGTTAGAAACATCAATACCAG 635573 24 100.0 44 ........................ TCTTTCTCCTCTTCGGCGCTCTTGAAGAACGTAACAATAGCCAC 635641 24 100.0 40 ........................ CCTCTTCAGCCGTAAGATCTACATACTCCACAGAGATGAC 635705 24 100.0 41 ........................ ACAGCGTACAAACTGAAGATCCTCAAAGGAACGCCAACAGA 635770 24 100.0 40 ........................ GTAAGCTGGTAGGTCTGGTTGGTGAAGGGGTTTATGTATT 635834 24 100.0 40 ........................ TTCATGGACATTATACACTAGTAAATCACTGCTGTCCTCT 635898 24 100.0 38 ........................ GTGGCGTACAAACAAGCAGATTACATTATTCTTTTCTA 635960 24 100.0 39 ........................ ATAAGGATCGTTTTTATGTTCTTCTTCGTCATCATCTTC 636023 24 100.0 38 ........................ CATGAAACATCACAACAACAAACTAGAGAATCAAATCA 636085 24 100.0 41 ........................ ATGGCTACATCTAGTTTCATGGTCTCGCAAGGATATATGCC 636150 24 100.0 43 ........................ GCAAAATGCTTAATACCTCTAATTTACTTCTGTCGTCTAACAA 636217 24 100.0 41 ........................ GAAGAGGTATTGAAAGGAAAACGGTGCAAAAACGAAGGAAA 636282 24 100.0 38 ........................ AAGACTTCCAATGCGAGTTGGAATCCTAACGTAGTTAA 636344 24 100.0 40 ........................ ATTAGTATTGAAATTAGTAACGACAAACATATTTCTAAAA 636408 24 100.0 39 ........................ ACCTATTAGTGTTTTTCACGTTTGCTGCCGCATTTACTG 636471 24 100.0 39 ........................ TAATGTATGCTGAAACTGGCGGTATTTCCGTGATGTTAG 636534 24 100.0 40 ........................ CCATACTACGTTTTTCTCGGTATAAACAGGCTTCTTCTTT 636598 24 100.0 40 ........................ TTTTCGTAAACTATTAGATCTGTTTTATCTTCATCACACT 636662 24 100.0 41 ........................ AGCGGAAGCCTAGAAGCGGATCTCAACAAAAAAGTGTTTGG 636727 24 100.0 48 ........................ CTCAAAAGTAATACTTTTTTTCTCCTAAACCAAAGTAATATCTTCTTT 636799 24 100.0 41 ........................ AAAATGTCTTCTGGGGTCATAGCTTCGTGAGCGAGTACTAT 636864 24 100.0 38 ........................ CCCATAGAAGTCACAGCAGGGTCACCTCATTCCTCCTC 636926 24 100.0 43 ........................ TTCCCTCAAACAGCTGTTTTAGGGAGTTGAGAGGGAACACCAG 636993 24 100.0 43 ........................ CAAGAATTGTACCGTTTCTCAGCCTATATGCAAATAATATCTT 637060 24 100.0 41 ........................ CAAAAATATACTCTGTCTTAGAGTTTAAAAATGTTTCTGTC 637125 24 100.0 41 ........................ AACCCAATATTTCATAATCATTGTTAGGTTCAATGTATCTA 637190 24 100.0 44 ........................ AAACCCTCTTTTAAGCTGAACATATTCACGATACTTTTGACTGC 637258 24 100.0 39 ........................ TCTCCTCATTTCCATCAATAAGTCTTAACCAGTATCTAT 637321 24 100.0 43 ........................ GAAGAATCATAAATGTAGTAGTTTTTCCAGTTCCTCTGTTAGA 637388 24 100.0 42 ........................ CGAGAAAGGGTTTTTGGGGATAGGGATAGGGGCTGCATTAAT 637454 24 100.0 38 ........................ TCTTTGCTTAAGTTTCTGATATCCTCTAATATACTCCT 637516 24 100.0 39 ........................ ATGAAACTTCTGTAATGTCTACTGTTATTCCATTAGTTA 637579 24 100.0 39 ........................ AAGGTTATTGAGATACCTACATTCAACGTACCCGCGTCA 637642 24 100.0 41 ........................ CTTAGAATGTACTTTTGAACCATAGGAGAATTGAAAATCAT 637707 24 91.7 41 ......................GT GTCTTGTTTATTGTAAGCGACAATTTGTAGGGATTCACTCT 637772 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ================================================ ================== 103 24 99.9 41 GTTAATCTACTATAGAATTGAAAG # Left flank : ACTAATTTTAATTTCAATTATTTCCGGGCTAGGATAGCGAAGTCGTAGAGTTTGGATTTTTAAGTTTTCTATAGCAGCTCTAGTTCCTTCCACTATGGGACTAGGAACTACTATAAGTAATTTATCCTCCTTTTGAGCTGAAGTCTCATTAAGAAGTCTTAGAAGATAAGTTTCATTAAATCCCAAAGTTACAAAGTAAGACTTCATCATTATATATGGTAATATCATAAATAAATAACTTTTGATTACTTTCGAAGAACTCCAATTCCAATTTTTATTCCCTACTATTTCCGTTGTTTTCCTTTTTCCTTGTTTCGTTTTGAGTTAGGTTGTTTTCCTAAATTCATTATCTTTATGAAGAATTCGTTAAAATCCCGGGAAAACCCGGGAATAGAAAAAAGATAAGAAAGAGTAATATAATACTAATGGAAAGAGTATAGAAGAAAAACTTATAAGAAAGGGAGAAGAAAAGATACAATAGAGGGTTATAAAAACCCTCA # Right flank : GAGGGCTCATCTTAAATGGGTAAACACGGAAACATCGTTTGGTGTTATTCAACTCTTTTGAGGGAAGAATCTAGTTGAGCCTATAGCATTTCAAATTACTTGTCATTTAACTTCATCATTATCATTATAATATACAACTTTATTCTAGTGACAATGATACGAAATTTCACCGTATTTAGAGTTAAGATAGTTTTCAACAGATTTTATAAATTGCTTTATAAATCTATTACTAGAGTTAGAGTCTTAAACTCAAATTTTGCCTTATCTATAGAAGATTAATAGAACACATGGGAAAGCGAAAATGGTCTTAAGGAGGCAATCTACGCCTCGCCTTTAACAGACATGAGTTTGGAACTGTAGGAGGAGACTGAAGGTAAATTTTCTGAGCAATCTGAAGTTTGTACATTATCTAAGGGTAGAATGCCTGCCTTGTTCTACAATATTATCTATATGATCTGAAGTTCTGTATGCTTGTTCAAATTTTCCTATACTAGCTTCAC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAATCTACTATAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //